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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b22f
         (642 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)               84   1e-16
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)                     82   3e-16
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)              81   1e-15
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)              79   2e-15
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)              77   1e-14
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)              77   2e-14
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)              75   7e-14
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)                     72   5e-13
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)                     71   1e-12
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)                     69   4e-12
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)                     68   6e-12
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)                     67   1e-11
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)                      65   5e-11
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)                     60   1e-09
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)                     60   2e-09
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)              59   3e-09
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)                     59   3e-09
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)                     58   5e-09
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)           58   6e-09
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)                      58   6e-09
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)                     56   2e-08
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)                     56   2e-08
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)              56   3e-08
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)                     55   4e-08
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)           55   6e-08
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)                     54   1e-07
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)              53   2e-07
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)              52   3e-07
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)                     52   4e-07
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)                51   7e-07
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)              51   7e-07
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)                     51   9e-07
SB_1442| Best HMM Match : SRCR (HMM E-Value=0)                         50   1e-06
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)                 49   3e-06
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)               49   3e-06
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)              47   1e-05
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)              47   1e-05
SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06)               47   1e-05
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)             44   1e-04
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)              44   1e-04
SB_35182| Best HMM Match : CUB (HMM E-Value=0)                         43   2e-04
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)               41   0.001
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)          40   0.001
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)                 40   0.002
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.005
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)                     38   0.007
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)                  38   0.007
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.012
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)                   37   0.016
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)           35   0.049
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)               35   0.049
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)               35   0.065
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)                  34   0.085
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.085
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.11 
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)                 31   0.60 
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)                 30   1.4  
SB_52187| Best HMM Match : HNF-1A_C (HMM E-Value=1.8)                  29   4.2  
SB_33909| Best HMM Match : FH2 (HMM E-Value=0)                         23   6.1  
SB_18721| Best HMM Match : CUB (HMM E-Value=0)                         28   7.4  
SB_52419| Best HMM Match : Drf_DAD (HMM E-Value=2.5)                   27   9.8  
SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.8  
SB_20260| Best HMM Match : fn3 (HMM E-Value=0)                         27   9.8  
SB_15159| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.8  
SB_13915| Best HMM Match : CAT (HMM E-Value=7.9e-08)                   27   9.8  

>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 867

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 5/193 (2%)
 Frame = +3

Query: 78   PSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGVW 257
            P  RIVGGST     +P    L+    +++  Q CG +++    V+TAAHC++D      
Sbjct: 627  PLSRIVGGSTAPPGAWPWQVMLI----YNSGRQFCGGTLVTPEWVITAAHCVVDKNPASI 682

Query: 258  RVRVGSTWGNSG--GVVHHVNRHIIH--PNYGRWSRD-NDIAIMRTSSNINYVNNAVQPA 422
            +VR+G+    S    V   ++   IH  P+YG   R  NDIA++R S     + + +  A
Sbjct: 683  QVRLGAQDRTSPDPSVEMRISIRSIHNHPDYGSPKRSSNDIALLRLSRP-TILTHRINLA 741

Query: 423  RIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGNTITNNML 602
             +P    +  +  + +  GWG    GGS  E L    V +  +S C   Y G  I+ +M+
Sbjct: 742  CMPNDTVHFPNGTMCYITGWGTLSSGGSQPEALNQAVVPLRTRSECERSYPGK-ISADMI 800

Query: 603  CAGWLDVGGRDSC 641
            CAG  + GG D+C
Sbjct: 801  CAGNPE-GGVDTC 812


>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 1007

 Score = 82.2 bits (194), Expect = 3e-16
 Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
 Frame = +3

Query: 87   RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDD---AVGVW 257
            RIVGG T  +  +P  A L   +     +  CG S++N   V+TAAHCI  +     G  
Sbjct: 432  RIVGGQTAKVEDWPWQAGL---KKGLDDTIVCGGSLINREWVVTAAHCIDRNNPSRTGCV 488

Query: 258  ------RVRVGST--WGNSGGVVHH-VNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNA 410
                  RV +G +    + G  +H  V +  IHP+Y      ND+A++R  + I      
Sbjct: 489  VPDPPIRVILGESDVTKHEGNEIHRDVAQICIHPDYHEIKLTNDLALIRLRTPITTFTKH 548

Query: 411  VQPARIPGS---NYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGN 581
            V+P  +P S   +  +G N  V   G+G       LS QLRH  + V++ S CR+ Y G+
Sbjct: 549  VRPVCLPTSATPDLAVGTNCTV--TGYGRVGENEDLSTQLRHATIPVLSVSECRANYSGH 606

Query: 582  TITNNMLCAGWLDVGGRDSC 641
            TI + ++CAG+ + G  DSC
Sbjct: 607  TINDKVICAGY-EGGKIDSC 625


>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 335

 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 65/192 (33%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCII----DDAVGV 254
           RIVGG+   IN +P  A LL + N     Q CG S+++   VLTAAHC++    D A+  
Sbjct: 29  RIVGGTEAPINGWPWQAMLLRSPNGD---QFCGGSLIDPGWVLTAAHCLVGEQPDSALLG 85

Query: 255 WRVRVGSTWGNSGGVVHHVNRHIIHPNY-GRWSRDNDIAIMRTSSNINYVNNAVQPARIP 431
              R   T G    +   V + I H NY       NDIA+++  +  N VN  V    + 
Sbjct: 86  AHYRSNKTVGTEKDI--KVAQIIPHKNYHSPIEMANDIALLKLENPANLVNG-VGTVCLA 142

Query: 432 GSNYNLGDNQV--VWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGNTITNNMLC 605
            +N +L  ++    +  GWG    GG+  ++L    V +V++S C +      I  +MLC
Sbjct: 143 NNNTHLPVDEFGKCYITGWGSLSSGGAAPDRLMQASVPLVSKSRCDTGNYTGKIHESMLC 202

Query: 606 AGWLDVGGRDSC 641
           AG L+ GG DSC
Sbjct: 203 AG-LEQGGVDSC 213


>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1031

 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 64/192 (33%), Positives = 90/192 (46%), Gaps = 7/192 (3%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGVWRVR 266
           RIVGG+T     +P  A L     +   +  CG ++++ R V+TA+HC+     G   VR
Sbjct: 248 RIVGGTTAQRGAWPWQAML----RYYNGNHFCGGTLVHPRWVVTASHCVHKLTTGDLYVR 303

Query: 267 VGSTW--GNSGGVVH-HVNRHIIHPNY-GRWSRDNDIAIM---RTSSNINYVNNAVQPAR 425
           +G+ W  G +G      + R  +HPNY       NDIA++   R +    Y N A    R
Sbjct: 304 MGAHWKDGKTGSEQDFRIQRIFMHPNYHSPVQYANDIALLLLDRPARLDRYTNLACLAPR 363

Query: 426 IPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGNTITNNMLC 605
               +  L D    W +GWG    GG+    L   QV +V+   C   Y G T   +MLC
Sbjct: 364 ----SSPLPDGTRCWISGWGRLSSGGASPNVLMQAQVPLVSGQTCSQAYPGRT-HYSMLC 418

Query: 606 AGWLDVGGRDSC 641
           AG L  GG D+C
Sbjct: 419 AG-LRHGGVDAC 429


>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 551

 Score = 77.0 bits (181), Expect = 1e-14
 Identities = 53/204 (25%), Positives = 102/204 (50%), Gaps = 6/204 (2%)
 Frame = +3

Query: 18  MRSIFILALSLTAFTAISAAPSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSIL 197
           +R   +  ++L+ FT  S  P  RI+GG+T   + +P  A +L+  + S W+  CG +++
Sbjct: 263 IRLFKVFCVTLSGFT--SEEPMSRIIGGTTAAPHDWPWQAQILIHVDKS-WNHRCGGTLI 319

Query: 198 NNRSVLTAAHCIIDDAV-GVWRVRVGS--TWGNSGGVVHHVNRHIIHPNYGR-WSRDNDI 365
           +   V+TAAHC+  +     +++++G+     + G +   V    +H  +    S   DI
Sbjct: 320 DTEWVVTAAHCVFQNIEPSNYKIKLGAHDRESSEGALTIPVTAIHMHTRFMTDGSYGYDI 379

Query: 366 AIMRTSSNINYVNNAVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVV 545
           AIM+ + N   + + + PA +PG    +    + +  GWG+T +G + +  L+  ++ VV
Sbjct: 380 AIMKLA-NPAPIGHTISPACLPGLYDQVTSGTMCYVTGWGMTEYGNAGARLLQQARIPVV 438

Query: 546 NQSVCRSRYGGNTITN--NMLCAG 611
           +   C      +   +   MLCAG
Sbjct: 439 SSEECERVNNKHRKVDKVTMLCAG 462


>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 786

 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 7/181 (3%)
 Frame = +3

Query: 90   IVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGVWRVRV 269
            I+GG+      +P   ++ +  N S+    CG ++++   VLTAAHC+ D+     ++ +
Sbjct: 546  IMGGANAEHGEWPWQVSMKL--NSSSLPHICGGNVISPWWVLTAAHCVQDERASNIKLTM 603

Query: 270  GSTWG--NSGGV--VHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIPGS 437
            G  W   N  G   V  V R I H NY   + D D A+++ +  +N+    VQP  +P S
Sbjct: 604  GE-WRLFNVDGTEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNF-TQYVQPVCLPDS 661

Query: 438  NYNLGDNQVVWAAGWGVTRFGGSLS-EQLRHVQVWVVNQSVCRSRY--GGNTITNNMLCA 608
            ++  G   + +  GWG T + GS S   L+ V + +VN S C + Y      IT  M CA
Sbjct: 662  DFPAG--TLCYVTGWGSTNYRGSPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCA 719

Query: 609  G 611
            G
Sbjct: 720  G 720


>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1465

 Score = 74.5 bits (175), Expect = 7e-14
 Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
 Frame = +3

Query: 84   LRIVGGSTTTINRYPTIAALLMTRNWSTWSQ-NCGSSILNNRSVLTAAHCIIDDAVGVWR 260
            LRI GGS +    YP   AL      S ++  +CG +++    VLTAAHC++    G+  
Sbjct: 1159 LRIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHCVVYKDSGIPY 1218

Query: 261  VRVGSTWGNSGGVVHHVNRHI---------IHPNYGRWSRDNDIAIMRTSSNINYVNNAV 413
              +    G       H++ H+          HP +   + D+DIA++R     N +   V
Sbjct: 1219 HGLRVFLGVHDITARHMDEHVQIIPSAGIYSHPRFSWRTYDSDIALIRLRWKAN-ITEYV 1277

Query: 414  QPARIP-GSNYNLGDNQVVWA-AGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGNT- 584
            +P  +P G    L   +      GWGVT      S+ L+   V VVN + C+  Y   T 
Sbjct: 1278 RPVCLPNGYQRRLVKPRAKGVMLGWGVTE-NKRPSKTLKEAIVPVVNHNACKKAYENETW 1336

Query: 585  -ITNNMLCAGWLDVGGRDSC 641
             +T+NMLCAG+ +   RDSC
Sbjct: 1337 PVTSNMLCAGYKN-KSRDSC 1355


>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 347

 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 9/194 (4%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQN-CGSSILNNRSVLTAAHCII--DDAVGVW 257
           RIVGG+      +P   ++    N  T + + CG S++    ++TAAHC     DA   +
Sbjct: 103 RIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFAYSKDAKD-Y 161

Query: 258 RVRVGSTWGNSGGVVHH---VNRHIIHPNYGRWSR-DNDIAIMRTSSNINYVNNAVQPAR 425
            + VG    N+         V R I+HP Y   +  D D+A+++ +S + Y N+ V+P  
Sbjct: 162 TIAVGEHDLNATDGYEQRPDVERIILHPKYAPHNNHDYDVALIKLASPLQY-NDRVRPVC 220

Query: 426 IPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGG--NTITNNM 599
           +P    +L +N   + +GWG  +  G     L    V +V++  C+  Y      +++ M
Sbjct: 221 LPSLKEDLEENTQCYISGWGHLQEAGHGPWVLHQAAVPLVSRDTCQKAYNDLHYKVSSRM 280

Query: 600 LCAGWLDVGGRDSC 641
            CAG+   GG D+C
Sbjct: 281 RCAGY-GAGGIDAC 293


>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 292

 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 9/200 (4%)
 Frame = +3

Query: 69  SAAPSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAV 248
           +A+   RI+GG  +TI ++P + A+++       +Q CG S++    ++TAAHC   + +
Sbjct: 34  TASACRRIMGGQRSTIEQHPWMVAMMLDS-----AQACGGSLVPEDWIVTAAHCFDSNRL 88

Query: 249 GVWRVRVGSTWGNSGGVVHHVNRHIIHPNYGR-------WSRDNDIAIMRTSSNINYVNN 407
             WRV  G+   +       V+    HP Y            D D+A+++   ++     
Sbjct: 89  R-WRVVAGNDMPSKAVNTTGVSAIWRHPQYKSNIASLESGPCDYDVALVKLEKSVATTPK 147

Query: 408 AVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCRS--RYGGN 581
            V    +P         +  + AGWG   FGG  S  LR VQV +V + +C S   YGG 
Sbjct: 148 TVPICLVPRDTPR-DLKRDCYVAGWGRRSFGGEQSLALREVQVHMVPRELCNSANSYGG- 205

Query: 582 TITNNMLCAGWLDVGGRDSC 641
            I    LCAG  + GG   C
Sbjct: 206 VIHERALCAGPRE-GGCGPC 224


>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 636

 Score = 68.5 bits (160), Expect = 4e-12
 Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 12/187 (6%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCI--IDDAVGVWR 260
           RI+ GS    N +P +  +    N++    +CG ++++ + V+TAAHC+  + D      
Sbjct: 351 RIISGSDAQPNSWPWMVQI----NYNN-GHHCGGTLVSPQWVVTAAHCVDHVKDPKNYNE 405

Query: 261 VRVGSTWGN-----SGGVVHH--VNRHIIHPNYGRWSR-DNDIAIMRTSSNINYVNNAVQ 416
           + +  T G      S G      V R I+HP Y   +  +NDIA+++ +     +N  V 
Sbjct: 406 LAI--TLGEHKRSASEGTEQRFSVARIIVHPQYFEPTAINNDIALIKLNKPAR-LNKYVN 462

Query: 417 PARIPGSNYNLGDNQVVWAAGWGVTRFGG--SLSEQLRHVQVWVVNQSVCRSRYGGNTIT 590
            A +P     L D ++ +A GWG+T  G   S S+ L+   + VVN+  C++ Y    IT
Sbjct: 463 LACLPRQGEELSDGKICYATGWGLTVGGDWKSQSDVLKQTPLPVVNRQECQTDYDDIPIT 522

Query: 591 NNMLCAG 611
             M+C G
Sbjct: 523 TAMMCTG 529


>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 454

 Score = 68.1 bits (159), Expect = 6e-12
 Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 10/198 (5%)
 Frame = +3

Query: 78  PSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGVW 257
           P+ RIVGG+      +P   A+LM +    + Q CG ++++   V+TA+HCI D     +
Sbjct: 207 PASRIVGGNDAMHGEWPW-QAMLMFQTPLGYKQFCGGALVHEDWVVTASHCINDIRPEDY 265

Query: 258 RVRVGSTWGNSGGVVHHVNRHI------IHPNYGRWSR--DNDIAIMRTSSNINYVNNAV 413
           +  + S  G++   +  V + I      +H +Y  +    +ND+A++R +         V
Sbjct: 266 KTHIISLGGHNKTGIMSVEQRIGIAKIYLHADYNLYPHQYNNDVALIRLAKPA-IRTRYV 324

Query: 414 QPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVC--RSRYGGNTI 587
           QP  +     +       W  GWG    GG+  E L+  +  +++ + C     Y    +
Sbjct: 325 QPVCLADGTVSFPPGTECWITGWGRLHSGGASPEILQQAKTKLLSYAECTKNGSYEAAAV 384

Query: 588 TNNMLCAGWLDVGGRDSC 641
           ++ MLCA    V G D+C
Sbjct: 385 SSTMLCA---QVPGIDTC 399


>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 349

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
 Frame = +3

Query: 309 VNRHIIHPNYGR-WSRDNDIAIMRTSSNINYVNNAVQPARIPGSNYNLGDNQVVWAAGWG 485
           V++ I+HP+YG+  +  +DIA+++   +   VNN V    +P +     D    W  GWG
Sbjct: 187 VSKVILHPSYGKPVTLAHDIALLKLEKSAT-VNNNVHTVCLPFNGPAPSDCTHCWITGWG 245

Query: 486 VTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGNTITNNMLCAGWLDVGGRDSC 641
               GG   + L+   V +V++S C   Y G  I ++MLCAG LD GG D+C
Sbjct: 246 HLASGGDTPDLLQQASVPIVSRSRCDKAYPGK-IDSSMLCAG-LDKGGIDAC 295


>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 285

 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 60/200 (30%), Positives = 86/200 (43%), Gaps = 15/200 (7%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCI---IDDAVGVW 257
           R+VGG      ++P   ALL  R      Q CG ++++ R V+T AHC      +    W
Sbjct: 28  RVVGGDEAKAGQFPWQIALLFKRQ-----QYCGGALVHERWVVTGAHCFNPYTSEDPRDW 82

Query: 258 RVRVGS---TWGNSGGVVHHVNRHIIHPNY-GRWSR---DN----DIAIMRTSSNINYVN 404
            V +G        S      V    +H +Y   W     D     DIA++     + + N
Sbjct: 83  NVTLGEYNLAVNESFEQRRGVKSITVHEHYKSMWFEGITDTPPMFDIALIELDRPVVF-N 141

Query: 405 NAVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGN- 581
             VQP  I   N +   N   + +GWG TR+ GS    L  V V +V+ + C      N 
Sbjct: 142 FHVQPICIMRPNISFKWNTACFISGWGHTRWNGSQPNVLNFVMVPLVSHATCNKPLSYNG 201

Query: 582 TITNNMLCAGWLDVGGRDSC 641
           TI    LCAG+ + G +DSC
Sbjct: 202 TIHETALCAGY-ERGLKDSC 220


>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 718

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
 Frame = +3

Query: 180 CGSSILNNRSVLTAAHCIID---DAVGVWRVRVGS-TWGNSGGVVHHV--NRHIIHPNY- 338
           CG SI++   V+TA HC++     A+G   +R          G   +   +R  +HP + 
Sbjct: 10  CGGSIIDPHWVVTAGHCVVPWSPRAIGTRVLRFAEHDSSRMEGYEQYAIPDRIHLHPGFV 69

Query: 339 -GRWSRDN--DIAIMRTSSNINYVNNAVQPARIPGSNYNLGDNQVVWAAGWGVTRF-GGS 506
            G  S     DIA++  +  I + ++ +QP  +P  +      ++ +  GWG T    G 
Sbjct: 70  IGGVSHPGYYDIALLHLAKPIQF-SDRIQPICLPQDDTEFPAGKMCYLTGWGETVLDSGV 128

Query: 507 LSEQLRHVQVWVVNQSVCRSR--YGGNTITNNMLCAGWLDVGGRDSC 641
            S  L+ ++V +VN+SVC S   Y G  I    +CAG+ + GG+D C
Sbjct: 129 FSPTLKQLKVPLVNKSVCNSNNSYSG-IIHEQFMCAGY-NQGGQDGC 173



 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
 Frame = +3

Query: 177  NCGSSILNNRSVLTAAHCIIDDA-----VGVWRVRVGSTWGNSGGVVHHV---NRHIIHP 332
            NCG S+++ + V+T+ HC          +  +  R+G    ++      +    +  IHP
Sbjct: 560  NCGGSLIDKQWVVTSGHCFDQRPYAYIPLSYYEFRLGEHRESTTEGWEEIIKGEKLFIHP 619

Query: 333  NYGR----WSRDNDIAIMRTSSNINYVNNAVQPARIPGSNYNLGDNQVVWAAGWGVTRFG 500
             Y      ++ D DIA+++      +    V    +P  +++  D    +  GWG T   
Sbjct: 620  KYKLGGLDYTGDYDIALVKLKRPAVFYKR-VHSVCLPEKSWSPPDGAGCYVTGWGRTAEN 678

Query: 501  GSLSEQLRHVQVWVVNQSVCRSRYGGNTITNNMLCAGW 614
               S+ LR  QV +V++  C + Y G  I    +CAG+
Sbjct: 679  EGYSDVLREAQVRLVSRDTCNASYSG-IINERYICAGY 715



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 10/185 (5%)
 Frame = +3

Query: 78  PSLRIVGGSTTTINRYP-TIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCI--IDDAV 248
           P  RIVGG     N +P  +  +L T N +T    CG S+++   +LT++HC    ++  
Sbjct: 242 PESRIVGGREAPRNSWPWQVEIILKTPNLTT--HYCGGSLIDPYWILTSSHCFWTYNNIS 299

Query: 249 GVWRVRVGSTWGNSGGVVHHV---NRHIIHPNYGRWSR----DNDIAIMRTSSNINYVNN 407
             + +R+G            +   ++  IHP           D D+A+++      + + 
Sbjct: 300 TQFEIRLGEHDVRKYEGFEEIIQGDKLYIHPGLVVGDLISPGDYDVALIKLKRPAVF-HK 358

Query: 408 AVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGNTI 587
            V    +P    NL      +  GWG T  G   S  L  V+V +V++ VC +    N  
Sbjct: 359 CVYSVCLPSVTANLTTGTKCYVTGWGKTAEGSPYSLVLNEVEVDIVSKEVCNANDSYNGT 418

Query: 588 TNNML 602
            N+ L
Sbjct: 419 INDRL 423



 Score = 34.3 bits (75), Expect = 0.085
 Identities = 20/81 (24%), Positives = 35/81 (43%)
 Frame = +3

Query: 354 DNDIAIMRTSSNINYVNNAVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQ 533
           D D+A+++      + +  V    +P    NL      +  GWG T  G   S  L  ++
Sbjct: 459 DYDVALIKLKRPAVF-HKRVHSVCLPSVTANLTTGTKCFVTGWGKTAEGSPYSPVLNELE 517

Query: 534 VWVVNQSVCRSRYGGNTITNN 596
           V +V++ VC +    N   N+
Sbjct: 518 VDIVSKEVCNANDSYNGTIND 538


>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 289

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGVWRVR 266
           RIVGG       +P   ALLM       +Q CG S++N   V+TA HC  +    +W   
Sbjct: 53  RIVGGVEAAPGAWPWQVALLMNG-----TQFCGGSLVNENWVVTARHCFHE----LWSSM 103

Query: 267 VGSTWGNSGGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNA--------VQPA 422
             ++W  S G  HH+   +    + + SR N ++  + ++ I  +  A        V P 
Sbjct: 104 DTASWTASLGE-HHL---VTSEGFEQSSRSNALSFTQRTTWITLLRLAKPAKLDEYVSPI 159

Query: 423 RIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCR--SRYGGNTITNN 596
            +    +     +  +  GWG T F G+  + +R   V +V   +C     Y G +I   
Sbjct: 160 CLLPDGFEFPWAKECYITGWGKTEFEGTKPQVIREATVKLVPPEICNQVESYNG-SIHVR 218

Query: 597 MLCAGWLDVGGRDSC 641
            LCAG+ D GG D+C
Sbjct: 219 ALCAGF-DQGGVDAC 232


>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 604

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGV---- 254
           RIVGG  T    YP    +L+ +        CG S+++ + VLTAAHC+      +    
Sbjct: 107 RIVGGHDTVKGAYPW--HVLIRKGGHV---ACGGSLISEKWVLTAAHCVTHRNGNILPRS 161

Query: 255 -WRVRVG---STWGNSGGV-VHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQP 419
            ++V++G   +T  N   V + +++    HP +     D D+A+++       ++  V+P
Sbjct: 162 RFQVQLGLYRTTLPNEPQVQLRNISEIRTHPQFDHVLFDADLALIKLDGEA-IISEYVRP 220

Query: 420 ARIPGSNYN---LGDNQVVWAAGWGVT--RFGG----SLSEQLRHVQVWVVNQSVCRSRY 572
             +P ++     +  ++   A GWG T  R G     +L++ L+   + +VN  VC   +
Sbjct: 221 ICLPETDDQASLISPSKFGMAVGWGKTVGRQGDVSVKNLADALKETCMPIVNSHVCNQAF 280

Query: 573 --GGNTITNNMLCAGWLDVGGRDSC 641
              G ++T NM CAG    GG+D C
Sbjct: 281 QDEGYSVTPNMFCAGQAS-GGKDIC 304


>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 696

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 4/192 (2%)
 Frame = +3

Query: 78  PSLRIVGGSTTTINRYPTIAALLMTR-NWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGV 254
           P  RIV G     + +P IA+L   R N+ T    CG++++     +TAAHC++      
Sbjct: 322 PGARIVNGQEAVSHSWPWIASLRKGRSNYHT----CGATLIRPGWAITAAHCVMRP--DK 375

Query: 255 WRVRVGSTWGNSGGVVHH---VNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPAR 425
           + V VGS   ++         V R   H  +   +  +DIA++    +   +N+ V  A 
Sbjct: 376 YTVIVGSHSRDASEPSAQNIKVRRVYRHRGFSMANYVDDIALLELERSA-VINDKVSTAC 434

Query: 426 IPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGNTITNNMLC 605
           +P     +G   + + AGWG  +  G ++  L+  +V +V++  C+  YG      + +C
Sbjct: 435 LPSGEPKVG--AICYIAGWGRLQSLGDVALTLQQAKVPIVSKEDCKRAYGAIIRPYSHIC 492

Query: 606 AGWLDVGGRDSC 641
            G+       SC
Sbjct: 493 VGFNTENAASSC 504



 Score = 38.3 bits (85), Expect = 0.005
 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
 Frame = +3

Query: 318 HII-HPNYGRWSRDNDIAIMRTSSNINYVNNA-VQPARIPGSNYNLGDNQVVWAAGWGVT 491
           H+I HP Y      NDIA++  S  + +     V  A +  +N      +  +  GWG T
Sbjct: 156 HVIEHPEYDDRKIKNDIALLELSRPVKFDREGKVGTACL--TNQQPTPGKRCYITGWGST 213

Query: 492 RFGGSLSEQLRHVQVWVVNQSVCRSRYGGNTITNNMLCAGWLDVGGRDSC 641
              G+    L+   + + + + C+++Y G + T + LCAG    G    C
Sbjct: 214 IGTGNSPRILQQAMLPIASHNDCKNKYYGVSSTAH-LCAGEARSGASGGC 262



 Score = 31.1 bits (67), Expect = 0.80
 Identities = 14/52 (26%), Positives = 30/52 (57%)
 Frame = +3

Query: 78  PSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCI 233
           P  R++ G     + +P   +L   R +  +  +CG +++++R V+TA+HC+
Sbjct: 26  PGARVINGQNAQPHSWPWQISL---RPYGRY-HSCGGTLISDRWVVTASHCV 73


>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 657

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 12/191 (6%)
 Frame = +3

Query: 78  PSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDA---- 245
           P  RIVGG   + N +P    L++         NCG S+++ + V+T+ HC         
Sbjct: 246 PQPRIVGGREASPNSWPWQVDLVVNGT----RHNCGGSLIDKQWVVTSGHCFDQRPYAYI 301

Query: 246 -VGVWRVRVGSTWGNSGGVVHHV---NRHIIHPNYGR----WSRDNDIAIMRTSSNINYV 401
            +  +  R+G    ++      +    +  IHP Y      ++ D DIA+++      + 
Sbjct: 302 PLSYYEFRLGEHRESTTEGWEEIIKGEKLFIHPKYKLGGLDYTGDYDIALVKLKRPAVFY 361

Query: 402 NNAVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGN 581
              V    +P  +++  D    +  GWG T      S+ LR  QV +V++  C + Y G 
Sbjct: 362 KR-VHSVCLPEKSWSPPDGAGCYVTGWGRTAENEGYSDVLREAQVRLVSRDTCNASYSG- 419

Query: 582 TITNNMLCAGW 614
            I    +CAG+
Sbjct: 420 IINERYICAGY 430



 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 10/177 (5%)
 Frame = +3

Query: 141 LLMTRNWSTWSQNCGSSILNNRSVLTAAHCI--IDDAVGVWRVRVGSTWGNSGGVVHHV- 311
           +L T N +T    CG S+++   +LT++HC    ++    + +R+G            + 
Sbjct: 4   ILKTPNLTT--HYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDERRIEGYEEII 61

Query: 312 --NRHIIHPNYGRWSR----DNDIAIMRTSSNINYVNNAVQPARIPGSNYNLGDNQVVWA 473
             ++  IHP           D D+A+++      + +  V    +P    NL      + 
Sbjct: 62  QGDQLYIHPGLVVGDLISPGDYDVALIKLKRPAVF-HKRVHSVCLPSVTANLTTGTKCFV 120

Query: 474 AGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGN-TITNNMLCAGWLDVGGRDSC 641
            GWG T  G   S  L  ++V +V++ VC +    N TI +   CAG+   GGRDSC
Sbjct: 121 TGWGKTAEGSPYSPVLNELEVDIVSKEVCNANDSYNGTINDRYFCAGFPQ-GGRDSC 176


>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
          Length = 506

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
 Frame = +3

Query: 309 VNRHIIHPNYGR-WSRDNDIAIMRTSSNINYVNNAVQPARIPGS--NYNLGD-NQVVWAA 476
           V++ + H +Y       +DIA+++ ++    + N V    +P +     L D NQ  W  
Sbjct: 21  VSKIVSHTSYNSPLQYSHDIALIKLATPA-IMGNGVGTVCLPDTIQKLPLDDLNQKCWIT 79

Query: 477 GWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGNTITNNMLCAGWLDVGGRDSC 641
           GWG    GG+   +L    V +V+QS C + Y  N I ++MLCAG LD GG D+C
Sbjct: 80  GWGTLASGGNQPNKLMQASVPLVSQSKCNTAY-PNKIHDSMLCAG-LDAGGIDAC 132



 Score = 38.3 bits (85), Expect = 0.005
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCI 233
           RIVGG+   +N +P  A L         SQ CG S+++   VLTAAHC+
Sbjct: 259 RIVGGTEAPVNGWPWQAMLRSAGG----SQFCGGSLIHPEWVLTAAHCL 303


>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 530

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
 Frame = +3

Query: 309 VNRHIIHPNYGR-WSRDNDIAIMRTSSNINYVNNAVQPARIPGS--NYNLGD-NQVVWAA 476
           V++ + H +Y       +DIA+++ ++    + N V    +P +     L D NQ  W  
Sbjct: 365 VSKIVSHTSYNSPLQYSHDIALIKLATPA-IMGNGVGTVCLPDTIQKLPLDDLNQKCWIT 423

Query: 477 GWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGNTITNNMLCAGWLDVGGRDSC 641
           GWG    GG+   +L    V +V+QS C + Y  N I ++MLCAG LD GG D+C
Sbjct: 424 GWGTLASGGNQPNKLMQASVPLVSQSKCNTAY-PNKIHDSMLCAG-LDAGGIDAC 476



 Score = 38.3 bits (85), Expect = 0.005
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCI 233
           RIVGG+   +N +P  A L         SQ CG S+++   VLTAAHC+
Sbjct: 219 RIVGGTEAPVNGWPWQAMLRSAGG----SQFCGGSLIHPEWVLTAAHCL 263


>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 968

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
 Frame = +3

Query: 180 CGSSILNNRSVLTAAHCIIDDA-VGVWRVRVGSTWGNSG-GV--VHHVNRHIIHPNYGRW 347
           CG S+++   V+TAAHCI   +    ++V  G    NS  G    H V R I HP Y   
Sbjct: 93  CGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPTYNSP 152

Query: 348 SRDNDIAIMRTSSNINYVNNAVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRH 527
              NDIA++  SS +        P    G   ++G     +  GWG  R  G     L+ 
Sbjct: 153 QLSNDIALIELSSPV--------PLSDRGHQVSVGSK--CFITGWGKIRHPGGSHHILQQ 202

Query: 528 VQVWVVNQSVCRSRYG----GNTITNNMLCAG 611
             +  ++Q  C+ +      G  IT++M+CAG
Sbjct: 203 AMMPPLSQDACKKKVQQAGFGIQITDSMVCAG 234



 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 32/89 (35%), Positives = 45/89 (50%)
 Frame = +3

Query: 375  RTSSNINYVNNAVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQS 554
            R S  +++VN    P  +P       D    W  GWG    GG+  + L+   V VV+++
Sbjct: 799  RQSRKLSHVNLVCLPDAVPAPT----DGTRCWITGWGRLASGGTAPDILQQASVPVVSRA 854

Query: 555  VCRSRYGGNTITNNMLCAGWLDVGGRDSC 641
             C   Y G  I ++MLCAG LD GG D+C
Sbjct: 855  RCEKAYPGK-IHDSMLCAG-LDQGGIDTC 881



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
 Frame = +3

Query: 78   PSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGVW 257
            PS RIVGG+      +P  A L  T  +      CG S+++ + VLTA HC+        
Sbjct: 660  PSTRIVGGTAAKQGDWPWQAQLRSTSGFPF----CGGSLIHPQWVLTATHCVSSRRPTDL 715

Query: 258  RVRVGSTWGNSG-GVVH--HVNRHIIHPNYGR-WSRDNDIAIMR--TSSNINYVNNAVQP 419
             +R+G+    +  G+     V + I+HP Y +     +DIA+++    +N+N    +   
Sbjct: 716  NIRLGAHNRRANLGMEQDIKVEKIIMHPGYRKPVGLAHDIALIKLLKPANLNRFPTSTTS 775

Query: 420  ARIPGSN 440
            A +  +N
Sbjct: 776  ASVDQTN 782


>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 282

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
 Frame = +3

Query: 78  PSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGVW 257
           P+ R++ GS   +  +P  A L +          CG S++    VLTAAHCI+ D    +
Sbjct: 28  PATRVISGSEALLGEWPWQAWLHLQHTGFI----CGGSLVAPGWVLTAAHCILSDDASKY 83

Query: 258 RVRVGSTWG---NSGGVVHHVNRHIIHPNYGR-WSRDNDIAIMRT---SSNINYVNNAVQ 416
           +V +G            +  V   I H  YG      ND+A+++     +  ++VN    
Sbjct: 84  KVVLGDVDRKKIEGSEQMIDVAMVIKHYAYGNPVPNANDVALLKLRDYPTKTDFVNTVCL 143

Query: 417 PARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGN----- 581
           P  +   +  +G +   +  GWG + + G  + +L+   + VV+   C  R+ G+     
Sbjct: 144 PQYM--DHVEIGKD--CFITGWGRSYYPGPTANKLQQADLRVVSNRACSERHMGSKNMRL 199

Query: 582 -----TITNNMLCAGWLDVGGRDSC 641
                 +T  MLCAG     G++ C
Sbjct: 200 ENGTWRVTETMLCAGDAGKTGKNGC 224


>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 656

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
 Frame = +3

Query: 66  ISAAPSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDA 245
           +S + S R+V G   T+  +P  A L +T +       CG S++  + VLTA HCI+ + 
Sbjct: 54  VSDSASSRVVSGDDATLGEWPWQAWLHVTPHGFV----CGGSLIAPQWVLTAGHCILTED 109

Query: 246 VGVWRVRVGST---WGNSGGVVHHVNRHIIHPNYGR-WSRDNDIAIMRTSSN---INYVN 404
              +RV +G            + HV R I HP+Y R    DND+A+++ S      ++VN
Sbjct: 110 PEKYRVVLGDVDRDTTEGSEQIFHVRRIIKHPHYSRDVPYDNDVALLQLSRPAFVTSFVN 169

Query: 405 NAVQPAR 425
               PA+
Sbjct: 170 TVCLPAQ 176


>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 974

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 15/206 (7%)
 Frame = +3

Query: 69   SAAPSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAV 248
            S+    RIVGG       +P +AA+ +  ++      CG +++    V+TAAHC   D  
Sbjct: 717  SSDKRFRIVGGREAKAGAWPWLAAIYVKGSF-----RCGGALIARDWVVTAAHCFYYDGK 771

Query: 249  GV---WRVRVGS---TWGNSGGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNIN---YV 401
             V     VR+G    T           +  ++HP   +   D D+A+++    +    YV
Sbjct: 772  IVPSDILVRLGEHDRTLEEGSEQNVRASNLVLHPLANKNGLDFDVALIQLKGGVKLTAYV 831

Query: 402  NNAVQPARIPGSNYNLGDNQVVWAAGWGVTRFG------GSLSEQLRHVQVWVVNQSVCR 563
                 P   P     +    V   AGWG T+ G      G     L+ VQ+  V+  VC+
Sbjct: 832  RTVCLPQ--PTDAILVRPGSVGIVAGWGSTQKGDASVRSGPPYPVLKQVQLPFVSHRVCQ 889

Query: 564  SRYGGNTITNNMLCAGWLDVGGRDSC 641
              +  N IT  M CAG + +G RD+C
Sbjct: 890  VNH-TNAITKRMRCAGDV-MGERDAC 913


>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
          Length = 249

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 12/188 (6%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDA-VGVWRV 263
           R+V GS      +P    LL +R+ S +   CG ++++   V+TAAHC+  +  V  ++V
Sbjct: 43  RVVSGSEVEPQSWPWQVHLLQSRDGS-FLHKCGGALIDREWVVTAAHCVFQEPDVSHYKV 101

Query: 264 RVG---------STWGNSGGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQ 416
            +G         +        +H   R +    YG      DIA+++ S     +N  V+
Sbjct: 102 ILGDFNRDIKEPTEQEFDVSTLHLHQRFLTDKGYG-----YDIALLKLSRPA-VINEFVR 155

Query: 417 PARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGNTITN- 593
              +P       +  + +  GWG T      S  LR  Q+ +V Q  C +      I + 
Sbjct: 156 TVCLPAQGSRALEGTMCFITGWGKTNITEDKSVTLREAQLPIVGQKECNNSNSWFHIVDE 215

Query: 594 -NMLCAGW 614
            +MLCAG+
Sbjct: 216 TSMLCAGY 223


>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 800

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
 Frame = +3

Query: 180 CGSSILNNRSVLTAAHCII-DDAVGVWRVRVGSTWGNSGGVVHHVNRHIIHPNY-GRWSR 353
           CG S+L++  VLTAAHC+I       + V VG+      G  H ++    H  Y G   +
Sbjct: 340 CGGSLLSSTWVLTAAHCVIRSHNTSDYTVIVGAHKRVLDGTEHKLSAFYKHEKYVGGKDK 399

Query: 354 DNDIAIMRTSSNINYVNNAVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGS----LSEQL 521
            +D+A++R +    + +  V P  +P     LG+ +  +  GWG  R  GS    ++ +L
Sbjct: 400 KHDLALIRLAKPAAF-SAKVSPVCLPKQGDLLGNEKNCYTTGWG--RVSGSMMFFMATKL 456

Query: 522 RHVQVWVVNQSVCR---SRYGGNTITNNMLCAG 611
           +  +  VV+   C     ++  +  T  M+CAG
Sbjct: 457 QQARTPVVDHETCAIKLDKFAADKTT--MICAG 487


>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 330

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
 Frame = +3

Query: 72  AAPSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVG 251
           A P  RIVGG+      +P  A  ++  N+    Q CG ++++ + V+TAAHC+      
Sbjct: 134 AKPHTRIVGGTKAPPGAWPWQA--MLRSNYG--GQFCGGTLVHPQWVITAAHCVYRRGPN 189

Query: 252 VWRVRVGSTW--GNSGGVV-HHVNRHIIHPNYGRWSR-DNDIAIMRTSSNINYVNNAVQP 419
            +++R+G+ +  G+ G      ++R I HP+Y + +R  +DIA++  +     +N AV  
Sbjct: 190 DFKIRMGAHFRKGDYGTEQDFSLSRVITHPSYHKPTRYAHDIALIELAKPA-VINKAVGL 248

Query: 420 ARIPGSNYNLGDNQVVWAAG 479
           A +   ++ + D +  W  G
Sbjct: 249 ACLADPSFPIDDGKKCWVTG 268


>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1870

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
 Frame = +3

Query: 309  VNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIPGSNYNLGDNQVVWAAGWGV 488
            V + I+HPNY R + D+D+A++R S     +N AV    +P    +    +  +  GWG 
Sbjct: 1405 VRQVIVHPNYRRQTTDSDVALLRLSHPAT-LNKAVSLICLPKEGESEAVGKNCYITGWGR 1463

Query: 489  TRFGGSLSEQLRHVQVWVVNQSVCRS---RYGGNTITNNMLCAGW 614
            T +    +  L+   + +V+Q  C +   R+G   +T+ M+C G+
Sbjct: 1464 TGYNRPGASVLQEAMMPIVSQQTCAAAMRRWG--VVTSRMICGGF 1506


>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 366

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
 Frame = +3

Query: 324 IHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIPG--SNY-NLGDNQVVWAAGWGVTR 494
           IHP+Y   S D+DIA++R +  + + +  V+P  +P   S+Y  L  N     +GWG  +
Sbjct: 198 IHPHYSPDSYDSDIALIRLAQPVTFTDY-VKPICLPSAASDYAQLQANVSGTISGWGKRK 256

Query: 495 -FGGSLSEQLRHVQVWVVNQSVCRSRYGGNTITNNMLCAGWLDVGGRDSC 641
            +   ++ +L    V +V+   CR  +    +T NM CAG+ +    D+C
Sbjct: 257 LWRDRVANRLHEATVPIVDIQTCRKAHPDYIVTANMFCAGFENSSRGDAC 306


>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
          Length = 136

 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 27/77 (35%), Positives = 42/77 (54%)
 Frame = +3

Query: 411 VQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGNTIT 590
           + P  +P  +    D +  W  GWG    GGS  + L+ V V + +++ C S Y  N I 
Sbjct: 8   IHPVCLPELDPEPVDGKHCWVTGWGRLSSGGSTPDYLQQVSVPIRSRARCDSSY-PNKIH 66

Query: 591 NNMLCAGWLDVGGRDSC 641
           ++M+CAG +D GG D+C
Sbjct: 67  DSMICAG-IDKGGIDAC 82


>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1864

 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 4/160 (2%)
 Frame = +3

Query: 174  QNCGSSILNNRSVLTAAHCIIDDAV-GVWRVRVGST---WGNSGGVVHHVNRHIIHPNYG 341
            Q CG +++    VLTAAHC    ++   W V+VG +     +  G    +    +HP Y 
Sbjct: 1264 QRCGGALIAADWVLTAAHCFDRFSMPPEWTVQVGVSDMRRRDGKGQSLSIKAIFVHPQYN 1323

Query: 342  RWSRDNDIAIMRTSSNINYVNNAVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQL 521
              S ++D+A+++      + N+ V P  I  +N  +   +    AGWG +      +  L
Sbjct: 1324 SSSHEHDLAVLQLQQPAEF-NSRVSPICIV-ANEEVQAGRACAVAGWGQSYLPRITTIPL 1381

Query: 522  RHVQVWVVNQSVCRSRYGGNTITNNMLCAGWLDVGGRDSC 641
               ++ V+ ++ C +    + +T  MLCAG    G  D+C
Sbjct: 1382 LTRRMRVIGRTDCAA--AQSRVTAQMLCAG-PAAGESDNC 1418


>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 532

 Score = 50.8 bits (116), Expect = 9e-07
 Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
 Frame = +3

Query: 180 CGSSILNNRSVLTAAHCIID-DAVGVWRVRVGSTWGNSGGVVHHVNRHIIHPNYGRWSRD 356
           CG S++    VLTAAHC+ D       R++  S           + +   H ++      
Sbjct: 106 CGGSLITPEWVLTAAHCVEDFPHPSAHRIKERSAIQQE----FRLTKLFKHKDFSMSHLK 161

Query: 357 NDIAIMRTSSNINYVNNAVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQV 536
           ND+A+++  + I   ++ V    +P  N         +  GWG    GG  SE L+   +
Sbjct: 162 NDVALLKLDNPIQ-PSDKVNTVCLPERNSRAQVGAQCFITGWGRLVGGGQPSEILQQAML 220

Query: 537 WVVNQSVC--RSRYGGNTITNNMLCAGWLDVGG 629
            V + S C  ++ Y       +M+CAG + +GG
Sbjct: 221 PVASHSACDRKNSYLVPVEEKSMICAGGMGMGG 253


>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
          Length = 2103

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 14/189 (7%)
 Frame = +3

Query: 87   RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGVWRVR 266
            +IVGG  T    +P    +     + T    CG SI+N++ ++TAAHC+     G  R  
Sbjct: 1782 QIVGGKVTEHGAWPWQVQI----GYKTMGHICGGSIVNSQWIVTAAHCVTTKPPGASRYT 1837

Query: 267  VGSTWGNSGGVVHH-------------VNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNN 407
            + +    +  +  H             +   ++HP+Y     D DIA+++    I + N 
Sbjct: 1838 MYAFSDLNVTLGEHQLYQLDGSEQNIPIEGIVVHPSYN--DLDYDIALLKLRQPITF-NA 1894

Query: 408  AVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGG-NT 584
             V    +P +    G     + +GWG        S  L+   + +V+Q  C  +Y     
Sbjct: 1895 YVSQVCLPQAALLAG--TPCYVSGWGRIGESSPGSNVLQEASIPLVDQRACEEQYRNLKP 1952

Query: 585  ITNNMLCAG 611
            IT  M CAG
Sbjct: 1953 ITARMRCAG 1961


>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
          Length = 153

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
 Frame = +3

Query: 78  PSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGVW 257
           PS RIVGG+    N +P  A L     +      CG ++++ R V+TA+HCI        
Sbjct: 20  PSTRIVGGTAAPKNAWPWQAQLRSASGFPF----CGGTLVHPRFVVTASHCIDKKTPSSL 75

Query: 258 RVRVG----STWGNSGGVVHHVNRHIIHPNYGR-WSRDNDIAIMRTSSNINYVNNAVQPA 422
           R+R+G    +  G S      V R I H  Y    +  NDIA++        +N AV  A
Sbjct: 76  RIRLGAHRRAESGESTVQDFRVKRIIKHERYSNPVNLANDIAVIELEEPAR-LNRAVNLA 134

Query: 423 RIPGSNYNLGDNQVVW 470
            +P  +  + + +  W
Sbjct: 135 CLPTQSNEIQEGKRCW 150


>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
          Length = 230

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
 Frame = +3

Query: 354 DNDIAIMRTSSNINYVNNAVQPARIP-GSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHV 530
           D D+A++R ++   + N       +P G+ +  G  +  +  GWGV ++ G+    LR  
Sbjct: 77  DYDVALLRLATPAKFTNYVYPICLLPQGARFRPG--KYCYVTGWGVLQWKGTKPAILREA 134

Query: 531 QVWVVNQSVCRSRYGGN-TITNNMLCAGWLDVGGRDSC 641
           QV +V Q  C S    N  ++   LCAG+ + GG D+C
Sbjct: 135 QVQLVPQDKCNSPQSYNGEVSGRALCAGF-ERGGVDAC 171


>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 898

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 7/157 (4%)
 Frame = +3

Query: 180 CGSSILNNRSVLTAAHCI-IDDAVGVWRVRVGSTWGNSGGVVHH---VNRHIIHPNYGRW 347
           CG S++    V+TAAHC+  +     + V VG+        V +   + +   H  +   
Sbjct: 57  CGGSLIAKDWVVTAAHCVDRNPTPSGYTVVVGAHHRTGNTPVQNTFRLKQLFKHEQFSMR 116

Query: 348 SRDNDIAIMRTSSNINYVNNAVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRH 527
              NDIA+++    +   ++ V    +P S          +  GWG T  GGS +  L+ 
Sbjct: 117 HLKNDIALLQLHEPVK-ASDKVNTVCLPSSGSRAQAGARCYITGWGRTVGGGSAAGILQQ 175

Query: 528 VQVWVVNQSVCRSRYGGNTI---TNNMLCAGWLDVGG 629
             + V   S C+ R  G  +   + +M+CAG    GG
Sbjct: 176 AMLPVAGDSDCQ-RTNGRLVPVDSRSMICAGGQGKGG 211


>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 620

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDA-VGVWRV 263
           R++GG       +P   AL    N+      CG S++++  V+TAAHC+   +    +++
Sbjct: 476 RVIGGKDAIPGAWPWQIALKSRGNFI-----CGGSLVSSTWVVTAAHCVARSSNPAQYQI 530

Query: 264 RVGSTWGNSGGVVH---HVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIPG 434
            VG    N   V     +V + I HP Y      NDIA++  +S    +++ V P  +P 
Sbjct: 531 IVGEHNRNVNEVTEETLNVKKVIAHPQYNNPRLSNDIALIELASPAK-LSSRVNPVCLPP 589

Query: 435 SNYNL 449
             Y L
Sbjct: 590 HGYKL 594


>SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06)
          Length = 151

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
 Frame = +3

Query: 354 DNDIAIMRTSSNINYVNNAVQPARIPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQ 533
           D DIA++R S    +  N V P  +    + L   +     GWG  R+ G+  E LR  +
Sbjct: 47  DFDIALVRLSEPAIFDEN-VSPICLLPPEHKLPWGKTCIITGWGHIRWNGTQPEALREAK 105

Query: 534 VWVVNQSVCR--SRYGGNTITNNMLCAGWLDVGGRDSC 641
           V +V   VC   + Y G TI +  LCAG+ + GG D+C
Sbjct: 106 VRLVPTWVCNLVNSYNG-TIHSRALCAGFKE-GGVDAC 141


>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
          Length = 234

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 1/120 (0%)
 Frame = +3

Query: 285 NSGGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIPGSNYNLGDNQV 464
           N+   V  V R   H  +  W   +DIA+++       +N+ V  A +P           
Sbjct: 9   NTAEQVIKVKRIFKHSGFSMWRYRDDIALLQLERPAQ-LNDRVNVACLPSPGDVPPVGSK 67

Query: 465 VWAAGWG-VTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGNTITNNMLCAGWLDVGGRDSC 641
            W  GWG      G L + L+  ++ + +   C+ +YG    +   LCAG        +C
Sbjct: 68  CWLTGWGRQVDSSGPLPDILQQARIPIASHEDCKRKYGSGIYSYTHLCAGEAKPNAAGAC 127


>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
          Length = 1019

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
 Frame = +3

Query: 66  ISAAPSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDA 245
           +S++ S RIVGG+      +P  A L  T    T    CG S++++  VLTAAHCI    
Sbjct: 384 VSSSTS-RIVGGAAANPGDWPWQAQLRTT----TGFPYCGGSLIHSNWVLTAAHCISSKR 438

Query: 246 VGVWRVRVG--STWGNSGGVVH--HVNRHIIHPNYGRWSRDNDIAIMR 377
                VR+G  S  G+    +    V+  I H NY   +  NDIA+++
Sbjct: 439 PAEVVVRLGAHSRLGSLTTDMQDIKVSAIITHSNYNSRTMYNDIALLK 486


>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
          Length = 963

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
 Frame = +3

Query: 474 AGWGVTRFG-GSLSEQLRHVQVWVVNQSVCRSRYG-GNTITNNMLCAGWLDVGGRDSC 641
           +GWG  + G GS S+ L   +V +V++  C  +   G+ IT NMLCAG +  GG DSC
Sbjct: 350 SGWGALQEGAGSTSKVLMQAKVPLVSRDQCSHQQSYGDRITENMLCAG-MRQGGVDSC 406


>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
          Length = 299

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
 Frame = +3

Query: 84  LRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCII-DDAVGVWR 260
           +RIVGG     + +P   ++ +       S  CG S+L+   +LTAAHC+I  +    + 
Sbjct: 29  VRIVGGDEAVPHSWPWQVSIRLKG-----SHICGGSLLSPLWLLTAAHCVIRSNNSADYT 83

Query: 261 VRVGSTWGNSGGVVHHVNRHIIHPNY-GRWSRDNDIAIMRTSSNINYVNNAVQPARIPGS 437
           V VG+      G  H ++    H  Y G   + +D+A+++ +    + +  V P  +P  
Sbjct: 84  VIVGAHKRVLDGTEHKLSTFYKHEKYVGGKDKKHDLALIKLAKPATF-STKVSPVCLPKQ 142

Query: 438 NYNLGDNQVVWAAG 479
              + + +  +A G
Sbjct: 143 GDLMKERENCFATG 156


>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
          Length = 418

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +3

Query: 90  IVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDD-AVGVWRVR 266
           I+GG+   +  +P   +L +T     +   CG ++L +  VLTAA C  D+   G W+V 
Sbjct: 258 IIGGTDAAVGEWPWQVSLYLTH----YGPVCGGTLLTSEWVLTAARCFRDNKRAGEWKVI 313

Query: 267 VGST 278
           +G T
Sbjct: 314 LGET 317


>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
          Length = 115

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
 Frame = +3

Query: 78  PSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGVW 257
           P+ RIVGG+      +P  A L  T  +      CG S++  + +LTA HC+        
Sbjct: 7   PNTRIVGGTAAKHGDWPWQAQLRTTSGFPY----CGGSLIAPQWILTATHCVERKQASSI 62

Query: 258 RVRVG-----STWGNSGGVVHHVNRHIIHPNYGR-WSRDNDIAIMRTSSNINY 398
            +R+G     +T G     +  V + I HP+Y +  +  +DIA+++    + Y
Sbjct: 63  VIRLGARRRVATVGTEKDYI--VTKVITHPSYHKPKTYSHDIALLKLDKPVLY 113


>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 669

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCI-IDDAVGVWRV 263
           RI+ G     + +P   +L     + T    CG S++++R V+TAAHCI  +   G + V
Sbjct: 105 RIINGQNAQPHSWPWQISLRGRSGFHT----CGGSLISDRWVVTAAHCIHRNKNPGGYTV 160

Query: 264 RVGSTWGNSGGVVH---HVNRHIIHPNYGRWSRDNDIAIMRTSSNINY 398
            VG+        V     +++ I HP Y      NDIA++  ++ + +
Sbjct: 161 VVGAHKKRGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALLELATPVQF 208



 Score = 37.1 bits (82), Expect = 0.012
 Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 11/186 (5%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDA------- 245
           RI+ G     + +P   +L     + T    CG S++++R V+TAA  I  +        
Sbjct: 428 RIINGQNAQPHSWPWQISLRGRSGFHT----CGGSLISDRWVVTAAQGIHRNKNPGGRQN 483

Query: 246 VGVWRVRVGSTWGNSGGVVH---HVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQ 416
            G + V VG+        V     +++ I HP Y      NDIA++  ++ + + ++A +
Sbjct: 484 PGGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALLELATPVQF-DSAGK 542

Query: 417 PARIPGSNYNLGDNQVVWAAGWGVTRFGGSLS-EQLRHVQVWVVNQSVCRSRYGGNTITN 593
              +  ++      +  +  GWG        S + L+   + + +   CR +YG  + T 
Sbjct: 543 VGTVCLTDQRPAPGKRCYITGWGAINGDTQQSPDILQQAMLPIASHENCRRKYGDVSSTA 602

Query: 594 NMLCAG 611
           + LCAG
Sbjct: 603 H-LCAG 607


>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 865

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
 Frame = +3

Query: 78  PSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCI-IDDAVGV 254
           P LRIV G     + +P   +          S  CG+S+L     LTAAHC+ + D    
Sbjct: 237 PPLRIVNGEDAVPHSWPWQLSFRYKG-----SHICGASLLTPGWALTAAHCLTLSDDASD 291

Query: 255 WRVRVGSTWGNSGGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNI 392
           + +  G+    + G V  +++   H  +      ND+A+++ S+ +
Sbjct: 292 YTLVAGAHQRENDGQVFGISKIRKHKGFSMVHVRNDVALLKLSTYV 337



 Score = 34.7 bits (76), Expect = 0.065
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +3

Query: 477 GWGVTRFGG--SLSEQLRHVQVWVVNQSVCRSRYGGNTITNNMLCAG 611
           GWG        +L+++L+  +V +VN + CRS  G     N+M+CAG
Sbjct: 416 GWGRISSSDQHTLADKLQQSKVPLVNYTTCRSTNGATVDENSMICAG 462


>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
          Length = 91

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 22/54 (40%), Positives = 29/54 (53%)
 Frame = +3

Query: 480 WGVTRFGGSLSEQLRHVQVWVVNQSVCRSRYGGNTITNNMLCAGWLDVGGRDSC 641
           WG T  GGS    L  V+V +V+ S C   Y  + +  +M+CAG    GG DSC
Sbjct: 2   WGRTAEGGSSPTVLMQVEVPIVSASTCSRAY--SRLHESMVCAGRAS-GGIDSC 52


>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 246

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
 Frame = +3

Query: 309 VNRHIIHPNYGRWSRDNDIAIMRTSSNI---NYVNNAVQPARIPGSNYNLGDNQVVWAAG 479
           +++   HP +   + D+DIAI+R S+ +   + VN    P++  G+  +LG N   + +G
Sbjct: 34  ISKITYHPGFSFATADHDIAILRLSAPVLLTSSVNTICLPSQ--GARASLGGN--CFISG 89

Query: 480 WGVTRFGGS----LSEQLRHVQVWVVNQSVCRSRYGGN--TITNNMLCAG 611
           WG  R   S    L+ +L+  +V ++  + C+ +   +   +  +M+CAG
Sbjct: 90  WG--RINSSDMQLLANKLQQSRVSIIENNKCKVKNDCHYKVLDKSMVCAG 137


>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
          Length = 386

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +3

Query: 78  PSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCI 233
           P  RIVGG+    N +P  A L  T  +      CG S+++ + +LTA HC+
Sbjct: 50  PHTRIVGGTAAKQNSWPWQAQLRTTSGFPY----CGGSLIHPQWILTATHCV 97


>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
          Length = 348

 Score = 35.1 bits (77), Expect = 0.049
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHC 230
           RIVGG+      +P    +    +     Q CG +++N   VLTAAHC
Sbjct: 126 RIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHC 173


>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
          Length = 227

 Score = 35.1 bits (77), Expect = 0.049
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCI 233
           R++ G   T + +P   +L M          CG S++++  VLTAAHC+
Sbjct: 37  RVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCV 85


>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
          Length = 235

 Score = 34.7 bits (76), Expect = 0.065
 Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDA-VGVWRV 263
           RI+ G     N +P   +L +       S NCG+S+L+    LTAAHC+   +    + +
Sbjct: 85  RIINGEEAVPNSWPWQLSLRVYG-----SHNCGASLLSPGWALTAAHCVQRSSNPADYTL 139

Query: 264 RVGS--TWGNSGGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNI 392
             G+     ++   V  V++ I H  +      ND+ ++R S+ +
Sbjct: 140 AAGAHRRVNDAHAQVLRVSQVISHKEFSMGHLRNDVTLLRLSAPV 184


>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
          Length = 687

 Score = 34.3 bits (75), Expect = 0.085
 Identities = 16/54 (29%), Positives = 31/54 (57%)
 Frame = +3

Query: 78  PSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIID 239
           P  R++GG       +P   ++ M +  S     CG ++++++ V+TAAHC+I+
Sbjct: 473 PMSRVIGGEAARPYSWPWQVSVSMGKLHS-----CGGALISSKWVITAAHCVIE 521


>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 72

 Score = 34.3 bits (75), Expect = 0.085
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHC 230
           RIVGG  +    +P  AAL +          CG S++ ++ V+TAAHC
Sbjct: 26  RIVGGIESANGAWPWQAALFLNGT----HHRCGGSVIKSQWVVTAAHC 69


>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1033

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +3

Query: 87  RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDD 242
           RI+ G     + +P   +L   R +      CG +++++R V+TA+HCI DD
Sbjct: 845 RIINGQNAQPHSWPWQISLRQGRRFHL----CGGALISDRWVVTASHCIHDD 892


>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
          Length = 379

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +3

Query: 171 SQNCGSSILNNRSVLTAAHCIIDDA---VGVWRVRVGSTWGNSGGVVHHVNRHIIHPNYG 341
           S  C  ++++ R VLT+AHC+ D +   +    V+VG  +    G +       I    G
Sbjct: 176 STGCTGTLISTRHVLTSAHCVHDSSEYIISAKSVKVG--FPRKNGKIRWAGVEYIRVPQG 233

Query: 342 RWSRDNDIA 368
            W+++ D++
Sbjct: 234 -WTQERDVS 241


>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
          Length = 231

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 180 CGSSILNNRSVLTAAHCIID-DAVGVWRVRVGSTWGNSGG 296
           CG S++    VLTAAHC+      G + V VG  WG + G
Sbjct: 63  CGGSLITPEWVLTAAHCVDHYPYPGAYTVVVG--WGRTVG 100


>SB_52187| Best HMM Match : HNF-1A_C (HMM E-Value=1.8)
          Length = 193

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 170 PSTPVPGHKQGSYCWVPIYRRCTTSNDPQRRGR 72
           PST  P H +     V I  RCTT+  PQ   R
Sbjct: 134 PSTKPPHHTRKHSTKVDITTRCTTNQTPQANAR 166


>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
          Length = 1063

 Score = 23.4 bits (48), Expect(2) = 6.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 474 PPKPPGCRPGCS 439
           PP PP  +PGC+
Sbjct: 726 PPPPPSPQPGCA 737



 Score = 23.0 bits (47), Expect(2) = 6.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 483 PSQPPKPPGC 454
           P  PP PPGC
Sbjct: 713 PPPPPPPPGC 722


>SB_18721| Best HMM Match : CUB (HMM E-Value=0)
          Length = 288

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 270 GSTWGNSGGVVHHVNRHIIHPNYGR 344
           GS+W   GG + +    + HPNY R
Sbjct: 51  GSSWAGCGGNLSNSTGQLTHPNYPR 75


>SB_52419| Best HMM Match : Drf_DAD (HMM E-Value=2.5)
          Length = 146

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +3

Query: 279 WGNSGGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVN 404
           W N+G  V  +NR  +HP +  W    +    R S  +  +N
Sbjct: 65  WENTG--VTQLNRLAVHPPFASWRNSEEARTDRPSQQLRSLN 104


>SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1276

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = +3

Query: 60  TAISAAPSLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLT 218
           TA+  A +  +VG +  T  +  T AAL  T++ +T +Q   +++   +   T
Sbjct: 92  TAVELATNTPVVGEADVTPQKTQTTAALTQTQDATTQTQQDAAALTQTQDATT 144


>SB_20260| Best HMM Match : fn3 (HMM E-Value=0)
          Length = 1428

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
 Frame = -2

Query: 215 QNGSVVENRASAILGPSTPVP-----GHKQGSYCWVPIYRRCTTSNDPQRRGRR 69
           QN SVV   AS++L    P+P     G  QG   ++   RR T +   +RR RR
Sbjct: 538 QNASVVSTGASSLLVTWKPIPWQLSNGRIQG---YILTLRRVTNTTQSKRRKRR 588


>SB_15159| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 143

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +3

Query: 279 WGNSGGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVN 404
           W N+G  V  +NR  +HP +  W    +    R S  +  +N
Sbjct: 61  WKNTG--VSQLNRLAVHPPFASWRSSEEARTDRPSQQLRSLN 100


>SB_13915| Best HMM Match : CAT (HMM E-Value=7.9e-08)
          Length = 215

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +3

Query: 279 WGNSGGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVN 404
           W N G  V  +NR   HP + RW    +    R S  +  +N
Sbjct: 74  WENPG--VTQLNRLAAHPPFARWRNSEEARTDRPSQQLRSLN 113


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,890,640
Number of Sequences: 59808
Number of extensions: 488318
Number of successful extensions: 3951
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 3730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3917
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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