BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b22f (642 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 76 2e-14 U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 75 6e-14 U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 39 0.003 U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 32 0.40 U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 27 8.6 U53155-8|AAC48263.1| 284|Caenorhabditis elegans Hypothetical pr... 27 8.6 U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 27 8.6 U28991-5|AAK68311.1| 234|Caenorhabditis elegans Hypothetical pr... 27 8.6 >U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like protease protein 1 protein. Length = 293 Score = 75.8 bits (178), Expect = 2e-14 Identities = 63/190 (33%), Positives = 88/190 (46%), Gaps = 5/190 (2%) Frame = +3 Query: 87 RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGV-WRV 263 R++GGS ++ + +P LL CG S+++ VLTAAHC D + V Sbjct: 57 RLIGGSESSPHSWPWTVQLLSRLG----HHRCGGSLIDPNFVLTAAHCFAKDRRPTSYSV 112 Query: 264 RVGSTWGNSGGVVHHVNRHIIHPNYG-RWSRDNDIAIMRTSSNINYVNNAVQPARIPGSN 440 RVG SG H V IHP Y + D AIMR +N + +P +P + Sbjct: 113 RVGGHRSGSGS-PHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVN-TSTTARPICLP--S 168 Query: 441 YNLGDNQVVWAAGWGVTRFGGSLS-EQLRHVQVWVVNQSVCRS--RYGGNTITNNMLCAG 611 +N++ GWG T G SLS LR + V +++ C S Y G +MLCAG Sbjct: 169 LPAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAG 228 Query: 612 WLDVGGRDSC 641 + G DSC Sbjct: 229 Y-SYGKIDSC 237 >U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like protease protein 2 protein. Length = 265 Score = 74.5 bits (175), Expect = 6e-14 Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 6/191 (3%) Frame = +3 Query: 87 RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCI-IDDAVGVWRV 263 R+VGG T +P AAL RN +T + +CG+SIL+ ++TAAHC D+ V + V Sbjct: 26 RVVGGFETVPGAFPWTAAL---RNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82 Query: 264 RVGSTWGNS----GGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIP 431 VG W N+ + ++ R +P Y + +DIAI+ N QP +P Sbjct: 83 VVGD-WDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLP 140 Query: 432 GSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVC-RSRYGGNTITNNMLCA 608 ++ + +GWG G +E+L+ + ++N+ C S ++++ + CA Sbjct: 141 SKDFVYTPGRQCVVSGWG--SMGLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCA 198 Query: 609 GWLDVGGRDSC 641 G+L+ GG DSC Sbjct: 199 GYLE-GGIDSC 208 >U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like protease protein 3 protein. Length = 313 Score = 38.7 bits (86), Expect = 0.003 Identities = 30/105 (28%), Positives = 54/105 (51%) Frame = +3 Query: 81 SLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGVWR 260 S RI+GG++ I+ A L++ + CG++++++ ++TAAHC + + Sbjct: 35 SFRIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRSF- 91 Query: 261 VRVGSTWGNSGGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNIN 395 V V N+ V IH Y + DNDIA++R SS+++ Sbjct: 92 VYVREP-KNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLS 135 >U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like protease protein 6 protein. Length = 360 Score = 31.9 bits (69), Expect = 0.40 Identities = 10/22 (45%), Positives = 16/22 (72%) Frame = +3 Query: 165 TWSQNCGSSILNNRSVLTAAHC 230 TWS++C ++ + R +LTA HC Sbjct: 70 TWSKHCSGTLTSPRHILTATHC 91 >U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical protein B0507.1 protein. Length = 615 Score = 27.5 bits (58), Expect = 8.6 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = -1 Query: 444 CSLIQECGPVAQHCSR--S*CCLKYA*SQYHCHETICRSLGVLCVCSRDAPRRHCC 283 CS+ C P C + + C Y + C + CR + +C +++ + CC Sbjct: 539 CSMGHMCDPNTHVCCKGTNRCPKDYVETGEQCTDDNCRGINQICHRTKNGKAKICC 594 >U53155-8|AAC48263.1| 284|Caenorhabditis elegans Hypothetical protein ZC513.1 protein. Length = 284 Score = 27.5 bits (58), Expect = 8.6 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 4/40 (10%) Frame = +2 Query: 107 NDDKSVPNNSCPAYDQE----LEYLVPELRKLYSQQPIRF 214 N+ KS + CP + + YL+PE+R LY + F Sbjct: 88 NEMKSFVSTQCPTKKHQTYVCVGYLIPEIRHLYPDSTVSF 127 >U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical protein F35A5.4 protein. Length = 524 Score = 27.5 bits (58), Expect = 8.6 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -1 Query: 444 CSLIQECGPVAQHCSRS*CCLKY 376 C + +C P CS++ CCLKY Sbjct: 412 CGVPCQCQPGYVQCSQNLCCLKY 434 >U28991-5|AAK68311.1| 234|Caenorhabditis elegans Hypothetical protein F08F8.8 protein. Length = 234 Score = 27.5 bits (58), Expect = 8.6 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%) Frame = +3 Query: 231 IIDDAVGVWRVRVGSTWGNSGGVVHHVNRH-IIHPNYG---RWSRDN-DIAIMR----TS 383 I DD V + ++W N+ + H + RH I +YG R +RDN D + R +S Sbjct: 68 INDDMNDVAGAQSSASWANNPAIQHTLRRHREILRDYGSEYRRARDNVDQVLQRELLLSS 127 Query: 384 SNINYVNNAVQPARIPGSNYNLGDN 458 SN N NN + R G + L +N Sbjct: 128 SNENR-NNPILNNRARGYDMYLKEN 151 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,643,003 Number of Sequences: 27780 Number of extensions: 343043 Number of successful extensions: 1097 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1038 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1094 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1427403330 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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