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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b20f
         (573 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)                     36   0.031
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)                34   0.095
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.17 
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)                31   0.51 
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.51 
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.51 
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.67 
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)                     31   0.88 
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.88 
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)                     30   1.5  
SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0)                     28   6.2  
SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.2  
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)                     28   6.2  
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.2  
SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.2  
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)               27   8.2  

>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 968

 Score = 35.5 bits (78), Expect = 0.031
 Identities = 15/76 (19%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = +2

Query: 182 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRNEPGEISYVHFA---VNHPEFSE 352
           C G +++    ++ A C  G  + P+Y +++ G   RN P      H     + HP ++ 
Sbjct: 93  CGGSLVSPTWVVTAAHCIAGSSHTPSY-KVVTGEHIRNSPEGTEQTHDVKRIITHPTYNS 151

Query: 353 ENYDKDVSIVRVTHAI 400
                D++++ ++  +
Sbjct: 152 PQLSNDIALIELSSPV 167


>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
          Length = 275

 Score = 33.9 bits (74), Expect = 0.095
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = -3

Query: 337 MVNSK-VNIRYFTGLIATGRSSDNATVCRIVEFSMETGSS*KVVVVGENNTSALLE 173
           M+NS+ +N   FTG + TGR    AT   +V+  +E GS   ++V+ + +    +E
Sbjct: 215 MINSRGINALTFTGSLETGRKVAAATAVNLVKCQLEMGSKNALIVLDDADLDNAVE 270


>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 898

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 2/132 (1%)
 Frame = +2

Query: 182 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRR-NEPGEISY-VHFAVNHPEFSEE 355
           C G ++     ++ A C         Y  ++    R  N P + ++ +     H +FS  
Sbjct: 57  CGGSLIAKDWVVTAAHCVDRNPTPSGYTVVVGAHHRTGNTPVQNTFRLKQLFKHEQFSMR 116

Query: 356 NYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSVSDGNLHK 535
           +   D++++++   +                         + GWG TV GGS + G L +
Sbjct: 117 HLKNDIALLQLHEPVKASDKVNTVCLPSSGSRAQAGARCYITGWGRTVGGGSAA-GILQQ 175

Query: 536 LELIVTNKENCR 571
             L V    +C+
Sbjct: 176 AMLPVAGDSDCQ 187


>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
          Length = 333

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +2

Query: 143 EVFLPILNQW--FQQCAGIVLTNYHYLSTATCFH-GEFYDPAYRRIIAGSSRRNEPGEIS 313
           E F+  +  W    QC+G ++   H ++ A C H G+++      I+ G S  +   E+ 
Sbjct: 138 EPFVSSVKLWSDVMQCSGTLIGPCHVITAAHCIHNGKWFVSPLTAILVGVSNTSSTDELD 197

Query: 314 YVHFAV 331
           Y  FAV
Sbjct: 198 Y--FAV 201


>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1864

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
 Frame = +2

Query: 143  EVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSS---RRNEPGEIS 313
            +V L +     Q+C G ++     L+ A CF   F  P    +  G S   RR+  G+  
Sbjct: 1253 QVALTLSGNPVQRCGGALIAADWVLTAAHCF-DRFSMPPEWTVQVGVSDMRRRDGKGQSL 1311

Query: 314  YVHFAVNHPEFSEENYDKDVSIVRVTHAIHF 406
             +     HP+++  +++ D++++++     F
Sbjct: 1312 SIKAIFVHPQYNSSSHEHDLAVLQLQQPAEF 1342


>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 867

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 5/123 (4%)
 Frame = +2

Query: 158  ILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRNEPGEISYVHFAV-- 331
            I N   Q C G ++T    ++ A C   +  +PA  ++  G+  R  P     +  ++  
Sbjct: 649  IYNSGRQFCGGTLVTPEWVITAAHCVVDK--NPASIQVRLGAQDRTSPDPSVEMRISIRS 706

Query: 332  --NHPEF-SEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQ 502
              NHP++ S +    D++++R++                            + GWGT   
Sbjct: 707  IHNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMPNDTVHFPNGTMCYITGWGTLSS 766

Query: 503  GGS 511
            GGS
Sbjct: 767  GGS 769


>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 786

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 3/132 (2%)
 Frame = +2

Query: 182 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRR-NEPG--EISYVHFAVNHPEFSE 352
           C G V++ +  L+ A C   E    +  ++  G  R  N  G  ++  V   ++H  +S 
Sbjct: 574 CGGNVISPWWVLTAAHCVQDE--RASNIKLTMGEWRLFNVDGTEQVIPVERIISHANYSY 631

Query: 353 ENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSVSDGNLH 532
              D D +++++T  ++F                       + GWG+T   GS S   L 
Sbjct: 632 NTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRGSPSPNYLQ 689

Query: 533 KLELIVTNKENC 568
           ++ L + N   C
Sbjct: 690 EVGLPLVNHSQC 701


>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 657

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 8/150 (5%)
 Frame = +2

Query: 143 EVFLPILNQWFQQCAGIVLTNYHYLSTATCF--HGEFYDPAYRRIIAGSSRRNE------ 298
           E+ L   N     C G ++  Y  L+++ CF  +         R+     RR E      
Sbjct: 2   EIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDERRIEGYEEII 61

Query: 299 PGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDL 478
            G+  Y+H  +   +      D DV+++++     F                       +
Sbjct: 62  QGDQLYIHPGLVVGDLISPG-DYDVALIKLKRPAVFHKRVHSVCLPSVTANLTTGTKCFV 120

Query: 479 LGWGTTVQGGSVSDGNLHKLELIVTNKENC 568
            GWG T +G   S   L++LE+ + +KE C
Sbjct: 121 TGWGKTAEGSPYSP-VLNELEVDIVSKEVC 149


>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 669

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
 Frame = +2

Query: 173 FQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRNEPGEISYVHFA--VNHPEF 346
           F  C G ++++   ++ A C H       Y  ++    +R        +  +  + HP++
Sbjct: 129 FHTCGGSLISDRWVVTAAHCIHRNKNPGGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKY 188

Query: 347 SEENYDKDVSIVRVTHAIHF 406
           ++     D++++ +   + F
Sbjct: 189 NDRRIVNDIALLELATPVQF 208



 Score = 29.1 bits (62), Expect = 2.7
 Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 8/141 (5%)
 Frame = +2

Query: 173 FQQCAGIVLTNYHYLSTATCFH-----GEFYDPAYRRIIAGSSRRNEPGEISY---VHFA 328
           F  C G ++++   ++ A   H     G   +P    ++ G+ ++     +     +   
Sbjct: 452 FHTCGGSLISDRWVVTAAQGIHRNKNPGGRQNPGGYTVVVGAHKKRGSTSVQQSLRLSQI 511

Query: 329 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGG 508
           + HP++++     D++++ +   + F                       + GWG      
Sbjct: 512 IEHPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTDQRPAPGKRCYITGWGAINGDT 571

Query: 509 SVSDGNLHKLELIVTNKENCR 571
             S   L +  L + + ENCR
Sbjct: 572 QQSPDILQQAMLPIASHENCR 592


>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 366

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = +2

Query: 335 HPEFSEENYDKDVSIVRVTHAIHF 406
           HP +S ++YD D++++R+   + F
Sbjct: 199 HPHYSPDSYDSDIALIRLAQPVTF 222


>SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0)
          Length = 473

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 128 SLVQIEVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFY 250
           +LV +E + P  N+W ++    +LT   Y STA    G+ Y
Sbjct: 111 NLVSMERYDPSTNEWEEEAVAPMLTARKYFSTAV-LDGKLY 150


>SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1149

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = -3

Query: 532 VEVAVRYTAALNGSSPSEQI-NKNTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILVVI 356
           +++ V Y AA+   S   Q  N+N L Y +   D    +   A +  M  SY+  +  + 
Sbjct: 303 MKIKVNYVAAVQDESTYSQFYNENNLKYEEEFTDVLENIKTRARIVIMVTSYNMAVEGMH 362

Query: 355 LLREFGMVNSK 323
           L +  G++N +
Sbjct: 363 LAKNRGLINGE 373


>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 537

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 17/80 (21%), Positives = 32/80 (40%)
 Frame = +2

Query: 329 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGG 508
           ++H  +S    D D +++++T  ++F                       + GWG+T   G
Sbjct: 375 ISHANYSYNTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRG 432

Query: 509 SVSDGNLHKLELIVTNKENC 568
           S S   L ++ L + N   C
Sbjct: 433 SPSPNYLQEVGLPLVNHSQC 452


>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 383

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 182 CAGIVLTNYHYLSTATCFH-GEFYDPAYRRIIAGSSRRN 295
           C G +++  H L+ A C H G  Y   +R +  G   RN
Sbjct: 168 CTGTLVSPRHVLTAAHCLHTGRDYTKGFRTLRVGFLLRN 206


>SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 398

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +3

Query: 198 SPTTTTFQLLPVSMENSTILHTVALSLDLPVAMSPVKYLMFTLLLTIPNSL 350
           SP+T+  Q++P +  +   L T + S +LPV       + FT    IP  +
Sbjct: 143 SPSTSVKQMVPNTQASRLCLQTTSASSNLPVTTQQSFRMTFTPPSMIPKPI 193


>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
          Length = 235

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +2

Query: 182 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRR--NEPGEISYVHFAVNHPEFSEE 355
           C   +L+    L+ A C      +PA   + AG+ RR  +   ++  V   ++H EFS  
Sbjct: 111 CGASLLSPGWALTAAHCVQRSS-NPADYTLAAGAHRRVNDAHAQVLRVSQVISHKEFSMG 169

Query: 356 NYDKDVSIVRVT 391
           +   DV+++R++
Sbjct: 170 HLRNDVTLLRLS 181


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,440,618
Number of Sequences: 59808
Number of extensions: 450091
Number of successful extensions: 1058
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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