Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b18r
         (706 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16FS2 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_Q4Z0Y5 Cluster: Putative uncharacterized protein; n=1; ...    33   6.8  
UniRef50_Q88TS3 Cluster: ABC transporter, permease protein; n=1;...    33   9.0  
UniRef50_A5K520 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  

>UniRef50_Q16FS2 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 569

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 277 IYLYSLILTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRH 405
           ++ Y  +L  H  THT  +   C  C    SC N++ K++ RH
Sbjct: 367 LFRYPSLLRDHETTHTGERLYQCLHCPKTYSCKNSFRKHVDRH 409


>UniRef50_Q4Z0Y5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 66

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 20/47 (42%), Positives = 27/47 (57%)
 Frame = -3

Query: 578 ESYVLWFIDFLIQKDRKKNYNYLTSCLLIDYP*MKCNYKYDAFHNYL 438
           E  +L+  DF  QK +KK YN L  C+ I +  M+C+   D  HNYL
Sbjct: 20  EMILLFLNDF--QKKKKKTYNILYICIFIHF--MECS---DIVHNYL 59


>UniRef50_Q88TS3 Cluster: ABC transporter, permease protein; n=1;
           Lactobacillus plantarum|Rep: ABC transporter, permease
           protein - Lactobacillus plantarum
          Length = 405

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
 Frame = -1

Query: 616 IYFALRSLKLLSVSHMFCGLL---TSSSKRIGKKIITI*LAVF*LIILE*NVTTNMMHSI 446
           + FAL ++ L +V+  FCG L    + + +  + +I + +  F + +   N  TN+   I
Sbjct: 275 LLFALLAVLLYTVASAFCGALVTRVADASKAAQPVIYLSMLAFFMALAFQNTPTNLFVKI 334

Query: 445 ITYLSIHNNNFM 410
            +Y+   ++ FM
Sbjct: 335 FSYIPFFSSYFM 346


>UniRef50_A5K520 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 3136

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 21   RYYISHNKLHTSS-CLSTVRVYSAI*TNNLASFYLALV*LMINIKKVVPYI 170
            R +I  N LH S  CL+  R+     T  +   +L+L+   +NIK V+P++
Sbjct: 2919 RLFIEQNNLHKSRFCLNEKRILKTC-TKYVVESFLSLLDKQVNIKNVIPFM 2968


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,098,735
Number of Sequences: 1657284
Number of extensions: 10485667
Number of successful extensions: 24738
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24702
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)