BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b18r (706 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q16FS2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9 UniRef50_Q4Z0Y5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8 UniRef50_Q88TS3 Cluster: ABC transporter, permease protein; n=1;... 33 9.0 UniRef50_A5K520 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0 >UniRef50_Q16FS2 Cluster: Putative uncharacterized protein; n=1; Aedes aegypti|Rep: Putative uncharacterized protein - Aedes aegypti (Yellowfever mosquito) Length = 569 Score = 33.9 bits (74), Expect = 3.9 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = +1 Query: 277 IYLYSLILTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRH 405 ++ Y +L H THT + C C SC N++ K++ RH Sbjct: 367 LFRYPSLLRDHETTHTGERLYQCLHCPKTYSCKNSFRKHVDRH 409 >UniRef50_Q4Z0Y5 Cluster: Putative uncharacterized protein; n=1; Plasmodium berghei|Rep: Putative uncharacterized protein - Plasmodium berghei Length = 66 Score = 33.1 bits (72), Expect = 6.8 Identities = 20/47 (42%), Positives = 27/47 (57%) Frame = -3 Query: 578 ESYVLWFIDFLIQKDRKKNYNYLTSCLLIDYP*MKCNYKYDAFHNYL 438 E +L+ DF QK +KK YN L C+ I + M+C+ D HNYL Sbjct: 20 EMILLFLNDF--QKKKKKTYNILYICIFIHF--MECS---DIVHNYL 59 >UniRef50_Q88TS3 Cluster: ABC transporter, permease protein; n=1; Lactobacillus plantarum|Rep: ABC transporter, permease protein - Lactobacillus plantarum Length = 405 Score = 32.7 bits (71), Expect = 9.0 Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Frame = -1 Query: 616 IYFALRSLKLLSVSHMFCGLL---TSSSKRIGKKIITI*LAVF*LIILE*NVTTNMMHSI 446 + FAL ++ L +V+ FCG L + + + + +I + + F + + N TN+ I Sbjct: 275 LLFALLAVLLYTVASAFCGALVTRVADASKAAQPVIYLSMLAFFMALAFQNTPTNLFVKI 334 Query: 445 ITYLSIHNNNFM 410 +Y+ ++ FM Sbjct: 335 FSYIPFFSSYFM 346 >UniRef50_A5K520 Cluster: Putative uncharacterized protein; n=1; Plasmodium vivax|Rep: Putative uncharacterized protein - Plasmodium vivax Length = 3136 Score = 32.7 bits (71), Expect = 9.0 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = +3 Query: 21 RYYISHNKLHTSS-CLSTVRVYSAI*TNNLASFYLALV*LMINIKKVVPYI 170 R +I N LH S CL+ R+ T + +L+L+ +NIK V+P++ Sbjct: 2919 RLFIEQNNLHKSRFCLNEKRILKTC-TKYVVESFLSLLDKQVNIKNVIPFM 2968 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 576,098,735 Number of Sequences: 1657284 Number of extensions: 10485667 Number of successful extensions: 24738 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 22623 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 24702 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 56198352344 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -