Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b18f
(635 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7RQC0 Cluster: DOMINO B-related; n=5; Plasmodium (Vinc... 36 0.62
UniRef50_A0Q0I3 Cluster: Accessory gene regulator protein C, put... 36 0.82
UniRef50_UPI0000E49991 Cluster: PREDICTED: similar to microtubul... 36 1.1
UniRef50_UPI0000DB77AF Cluster: PREDICTED: similar to WD repeat ... 35 1.4
UniRef50_A7NU50 Cluster: Chromosome chr18 scaffold_1, whole geno... 34 3.3
UniRef50_Q16FS2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_O45729 Cluster: Putative uncharacterized protein sru-15... 34 3.3
UniRef50_Q6MMT0 Cluster: Putative uncharacterized protein precur... 33 5.8
UniRef50_Q8IB39 Cluster: Putative uncharacterized protein PF08_0... 33 5.8
UniRef50_Q4Z0Y5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_Q88TS3 Cluster: ABC transporter, permease protein; n=1;... 33 7.6
>UniRef50_Q7RQC0 Cluster: DOMINO B-related; n=5; Plasmodium
(Vinckeia)|Rep: DOMINO B-related - Plasmodium yoelii
yoelii
Length = 1732
Score = 36.3 bits (80), Expect = 0.62
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = -2
Query: 316 ILLDEEVNKPQNI*LTLNSFNDLNAKYISLCQVTLYCNHFRLIPNRIV---YIYFINRSF 146
IL DE +N + + TL S N + I L Q+ CNH L N+ + Y Y + +
Sbjct: 638 ILYDEFINN-KKVQNTLTSGNYMGLMNI-LIQLRKVCNHCDLFTNKYIQTPYYYILPIQY 695
Query: 145 NVNLACSIVRNVIYW*FILLL*YGHNYLI 59
N+ C + N Y F L+L + HN +
Sbjct: 696 NIPKFCLLFENNYYKDFYLIL-FLHNEFV 723
>UniRef50_A0Q0I3 Cluster: Accessory gene regulator protein C,
putative; n=1; Clostridium novyi NT|Rep: Accessory gene
regulator protein C, putative - Clostridium novyi
(strain NT)
Length = 437
Score = 35.9 bits (79), Expect = 0.82
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 10/145 (6%)
Frame = -2
Query: 406 IMECIIFVVTFHSRIIN*KTAS*IVIIFFPILLDEEVNKPQNI*LTLNSFNDLNAKYISL 227
I+ I ++ ++ N I FF +++ + Q I + L++ DLN YI
Sbjct: 59 ILLTFILLILLFKKVFNKDFFLIIETCFFTLII--MIFSEQLIAIILSNLLDLNLSYIIS 116
Query: 226 CQVTLYCNHFRLIPNRIVYI-------YFINRSFNVNLACSIVRNVIYW*FILLL*YGHN 68
V +C++ +I N I I +I + +N SI++N FIL+L
Sbjct: 117 NNVLKFCSNILIIINNIFIINIHSMLWKYIKDKYFLNYCNSIIKNF----FILML----T 168
Query: 67 YLILICALLIY---SPFVPNKVYQF 2
+++LI LL+Y + ++ NK + F
Sbjct: 169 FILLISYLLLYECFNSYLKNKTFIF 193
>UniRef50_UPI0000E49991 Cluster: PREDICTED: similar to
microtubule-associated protein H1 (clone KS18) - longfin
squid (fragment); n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to
microtubule-associated protein H1 (clone KS18) - longfin
squid (fragment) - Strongylocentrotus purpuratus
Length = 533
Score = 35.5 bits (78), Expect = 1.1
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +2
Query: 59 NQIIMAILEKQDELPVNYIPDNAAGQIDIKGSIDEVNINNPIGNQSEV 202
N+I + L Q E+PVN IP +G + + I+E+ + NP GNQ+EV
Sbjct: 156 NEIPVGNLGNQAEVPVNKIPVGNSGN-ETEDPINEIPVGNP-GNQAEV 201
Score = 35.1 bits (77), Expect = 1.4
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 59 NQIIMAILEKQDELPVNYIP-DNAAGQIDIKGSIDEVNINNPIGNQSEV 202
N+I + L Q E+PVN IP N+ Q ++ I+E+ + NP GNQ+EV
Sbjct: 268 NEIPVGNLGNQAEVPVNEIPVGNSGNQAEV--PINEIPVGNP-GNQAEV 313
Score = 32.7 bits (71), Expect = 7.6
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 59 NQIIMAILEKQDELPVNYIP-DNAAGQIDIKGSIDEVNINNPIGNQSEV 202
N+I + L Q E+PVN IP N+ Q ++ ++E+ + N +GNQ+EV
Sbjct: 204 NEIPVGNLGNQAEVPVNEIPVGNSGNQAEV--PVNEIPVGN-LGNQAEV 249
>UniRef50_UPI0000DB77AF Cluster: PREDICTED: similar to WD repeat
domain 67; n=1; Apis mellifera|Rep: PREDICTED: similar
to WD repeat domain 67 - Apis mellifera
Length = 390
Score = 35.1 bits (77), Expect = 1.4
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = -2
Query: 274 LTLNSFNDLNAKYISLCQVTLYCNHFRLIPNRIVYIYFINRSFNVNLACSIVRN--VIYW 101
L L F + KY +V ++ L N+ Y N++ N+N +I++N +
Sbjct: 132 LILKEFGEYPEKY----RVLIWSTILNLPSNKSAYNALANKAANINFTLNILKNHPLANR 187
Query: 100 *FILLL*YGHNYLILICALLIYSPFVPNKVYQF 2
+LL N LI C LLI F+PN V+ F
Sbjct: 188 SKKILLMTTVNCLIQWCPLLIQCSFLPNLVFPF 220
>UniRef50_A7NU50 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1026
Score = 33.9 bits (74), Expect = 3.3
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +2
Query: 140 DIKGSIDEVNINNPIGNQSEVIAIQGYLTEADILCIKIIEAVECESYVLWFIDF-LIQKD 316
D++ + N N IG S +GYLTE + IK+++ S+ +F + ++
Sbjct: 696 DLRMATGNFNQQNLIGKGSFGSVYKGYLTEGTAVAIKVLDIQRNGSWKSFFAECEALRTV 755
Query: 317 RKKN-YNYLTSCLLIDYP*MK-CNYKYDAFHN 406
R +N +TSC +D+ ++ YD HN
Sbjct: 756 RHRNLVKLITSCSSLDFKNVEFLALIYDFMHN 787
>UniRef50_Q16FS2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 569
Score = 33.9 bits (74), Expect = 3.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 573 IYLYSLILTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRH 445
++ Y +L H THT + C C SC N++ K++ RH
Sbjct: 367 LFRYPSLLRDHETTHTGERLYQCLHCPKTYSCKNSFRKHVDRH 409
>UniRef50_O45729 Cluster: Putative uncharacterized protein sru-15;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein sru-15 - Caenorhabditis elegans
Length = 322
Score = 33.9 bits (74), Expect = 3.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -2
Query: 175 VYIYFINRSFNVNLACSIVRNVIYW*FI 92
+Y++FIN FNV L +V N I+W F+
Sbjct: 190 IYVFFINNWFNVKLDNFLVPNAIFWLFL 217
>UniRef50_Q6MMT0 Cluster: Putative uncharacterized protein
precursor; n=1; Bdellovibrio bacteriovorus|Rep: Putative
uncharacterized protein precursor - Bdellovibrio
bacteriovorus
Length = 250
Score = 33.1 bits (72), Expect = 5.8
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 59 NQIIMAILEKQDELPVNYIPDNAAGQIDIKGSIDEVNINNPIGNQSEVIAIQGY-LTEAD 235
+ +I +LE +LP N +P+ GQ G++ +V + + ++E + G E D
Sbjct: 80 SMVIGQVLEPSSKLPKNTLPEVRPGQPGFSGAVTQVLLEQVVVLEAENFNVAGVPEAEVD 139
Query: 236 ILCIKIIEAVECESY 280
K+ +AV +Y
Sbjct: 140 AAVAKVEKAVAGRAY 154
>UniRef50_Q8IB39 Cluster: Putative uncharacterized protein
PF08_0046; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF08_0046 - Plasmodium
falciparum (isolate 3D7)
Length = 499
Score = 33.1 bits (72), Expect = 5.8
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -2
Query: 247 NAKYISLCQVTLYCNHFRL--IPNRIVYIYFINRSFNVNLACSIVRNVIYW*FIL 89
N KYI ++TL+ HF L + N+I+YI N F +N +++R+ +W + +
Sbjct: 391 NQKYIENTKITLFPFHFYLSSLKNKIIYILEKNDHFYLN-DSNVLRSYNFWSYFI 444
>UniRef50_Q4Z0Y5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 66
Score = 33.1 bits (72), Expect = 5.8
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +2
Query: 272 ESYVLWFIDFLIQKDRKKNYNYLTSCLLIDYP*MKCNYKYDAFHNYL 412
E +L+ DF QK +KK YN L C+ I + M+C+ D HNYL
Sbjct: 20 EMILLFLNDF--QKKKKKTYNILYICIFIHF--MECS---DIVHNYL 59
>UniRef50_Q88TS3 Cluster: ABC transporter, permease protein; n=1;
Lactobacillus plantarum|Rep: ABC transporter, permease
protein - Lactobacillus plantarum
Length = 405
Score = 32.7 bits (71), Expect = 7.6
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 234 IYFALRSLKLLSVSHMFCGLL---TSSSKRIGKKIITI*LAVF*LIILE*NVTTNMMHSI 404
+ FAL ++ L +V+ FCG L + + + + +I + + F + + N TN+ I
Sbjct: 275 LLFALLAVLLYTVASAFCGALVTRVADASKAAQPVIYLSMLAFFMALAFQNTPTNLFVKI 334
Query: 405 ITYLSIHNNNFM 440
+Y+ ++ FM
Sbjct: 335 FSYIPFFSSYFM 346
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,645,336
Number of Sequences: 1657284
Number of extensions: 9750940
Number of successful extensions: 24659
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 22727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24647
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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