Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b17r
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 66 2e-11
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 64 8e-11
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 36 0.040
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 30 2.0
AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical ... 30 2.0
Z50004-1|CAA90291.1| 396|Caenorhabditis elegans Hypothetical pr... 29 2.6
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 3.5
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 29 3.5
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 3.5
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 3.5
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 3.5
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 3.5
U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical p... 28 8.1
Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical pr... 28 8.1
U42832-2|AAA83572.1| 558|Caenorhabditis elegans Udp-glucuronosy... 28 8.1
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 66.5 bits (155), Expect = 2e-11
Identities = 65/215 (30%), Positives = 92/215 (42%), Gaps = 7/215 (3%)
Frame = -3
Query: 677 CGGSVLTARSVLTAAHCIVAVFTLGSLSGNLRLTVGTNQWNSGGSLHTVSRNITHPHY-V 501
CGGS++ VLTAAHC F + + VG ++ + GS H V+ HP Y +
Sbjct: 84 CGGSLIDPNFVLTAAHC----FAKDRRPTSYSVRVGGHR-SGSGSPHRVTAVSIHPWYNI 138
Query: 500 SNTIKNDLGILITSSNIVFNNRVRPISL-SFDYVPGGVPVRVAGWGRVRANGALST-NLL 327
D I+ + + RPI L S V + V V GWG +LS L
Sbjct: 139 GFPSSYDFAIMRIHPPVNTSTTARPICLPSLPAVENRLCV-VTGWGSTIEGSSLSAPTLR 197
Query: 326 EINVRTIDGQTCVRTAAQAAIDLNVRAPPVEPHIELCTFHAEG-TGTCNGDSGSAL--AR 156
EI+V + C + P + LC ++ G +C GDSG L AR
Sbjct: 198 EIHVPLLSTLFCSSLPNYIG---RIHLPSM-----LCAGYSYGKIDSCQGDSGGPLMCAR 249
Query: 155 TDSGLQVGIVSWGFPCAR-GAPDMFVRVSAFRSWL 54
G+VSWG CAR G P ++ V + +W+
Sbjct: 250 DGHWELTGVVSWGIGCARPGMPGVYGNVHSASTWI 284
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 64.5 bits (150), Expect = 8e-11
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 12/248 (4%)
Frame = -3
Query: 746 QAAQGSHPHMVAMTNGIFIRSFVCGGSVLTARSVLTAAHCIVAVFTLGSLSGNLRLTVG- 570
+ G+ P A+ N ++ CG S+L ++TAAHC F + + VG
Sbjct: 32 ETVPGAFPWTAALRNKA-TKAHHCGASILDKTHLITAAHC----FEEDERVSSYEVVVGD 86
Query: 569 --TNQWNSGGSLHTVSRNITHPHYVSNTIKNDLGIL-ITSSNIVFNNRVRPISL---SFD 408
NQ + + + R +P Y + +D+ IL I I FN +PI L F
Sbjct: 87 WDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFV 145
Query: 407 YVPGGVPVRVAGWGRVRANGALSTNLLEINVRTIDGQTCVRTAAQAAIDLNVRAPPVEPH 228
Y PG V V+GWG + A L + I+ CV ++Q ++ A
Sbjct: 146 YTPGRQCV-VSGWGSMGLRYA--ERLQAALIPIINRFDCV-NSSQIYSSMSRSA------ 195
Query: 227 IELCTFHAE-GTGTCNGDSGSALA-RTDSGLQV--GIVSWGFPCA-RGAPDMFVRVSAFR 63
C + E G +C GDSG A R + G V G++SWG CA + P ++ V+ +
Sbjct: 196 --FCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYL 253
Query: 62 SWLQQNIS 39
SW+ I+
Sbjct: 254 SWISAIIN 261
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 35.5 bits (78), Expect = 0.040
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = -3
Query: 680 VCGGSVLTARSVLTAAHCIVAVFTLGSLSGNLRLTVG--TNQW---NSGGSLHTVSRN 522
+CGG+++T + VLTAAHC F G G W NS GSL RN
Sbjct: 61 ICGGTLITLKHVLTAAHCFQKHFGAKKEGGEENSMSGRYCESWVIYNSEGSLEIYFRN 118
Score = 34.7 bits (76), Expect = 0.070
Identities = 44/180 (24%), Positives = 64/180 (35%), Gaps = 8/180 (4%)
Frame = -3
Query: 617 VFTLGSLSGNLRLTVGTNQWNSGGSLHTVSRNITHPHYVSNTIK-NDLGILITSSNIVFN 441
V T+G++ L G G +SR Y ++ + ND+ IL S I
Sbjct: 131 VVTVGAMCTRLEQKYGCVNEKQNGKTLKISRFAIGDFYKTHCEQGNDIVILELESTIDDV 190
Query: 440 NRVRPISLSF---DYVPGGVPVRVAGWGRVRANGALSTNLLEINVRTIDGQTCVRTAAQA 270
L F + G V GWG G + I V T+ +T
Sbjct: 191 EGANYACLPFLPEVNIQSGANVTSFGWGSDPGKGFDNAAFPMIQVLTLATETLATCEENW 250
Query: 269 AIDLNVRAPPVEPHIELCTFHAEGTGTCNGDSGSALA--RTDSGLQ--VGIVSWGFPCAR 102
+ P CT E C+GDSG L ++DS + + IVS+G C +
Sbjct: 251 GTSI--------PFDSFCTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIAIVSYGSDCVQ 302
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 31.1 bits (67), Expect = 0.87
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -3
Query: 218 CTFHAEGTGTCNGDSGSALARTDS----GLQVGIVSWGFPC 108
CT +C+GDSGS + RT + VG++S G PC
Sbjct: 197 CTSAVNRGLSCDGDSGSGVVRTSDTRNVQVLVGVLSAGMPC 237
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 89 CQELPVRKGSPTTRCRLGDRCR-SEPMRCHCH-HCKYQFLL 205
CQ LP G CR D+C S P C+ + HC Y +L
Sbjct: 1090 CQCLPGFSGDGFINCRGADQCNPSNPSACYQNAHCVYDAIL 1130
>AC024812-7|AAF59548.2| 419|Caenorhabditis elegans Hypothetical
protein Y54E10BR.8 protein.
Length = 419
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +2
Query: 176 CHHCKYQFLLRGMCRARYEVRQEEPSR*GQWPPGPQ---SSRKSDHQ 307
CH+C QF RG + + E QW G Q SS KS H+
Sbjct: 279 CHYCTRQFSQRGALKTHMRLHTGERPFVCQWECGKQFASSSAKSHHE 325
>Z50004-1|CAA90291.1| 396|Caenorhabditis elegans Hypothetical
protein C02B4.2 protein.
Length = 396
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 140 GDRCRSEPMRCHCHHCKY-QFLLRGMCRARYEVRQ 241
GD + MRC C HC+Y + ++ GM R + +
Sbjct: 71 GDCIIDKSMRCSCRHCRYKKCIIAGMDRGELSMER 105
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 45 VLLQPGPEGADSDEHVRSSPCAREAPRHDADLETAVGPSQCAATVTI 185
V + GPEG + E V + +A ++ +E G C AT+T+
Sbjct: 2935 VQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEATLTV 2981
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 45 VLLQPGPEGADSDEHVRSSPCAREAPRHDADLETAVGPSQCAATVTI 185
V + GPEG + E V + +A ++ +E G C AT+T+
Sbjct: 2295 VQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEATLTV 2341
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 45 VLLQPGPEGADSDEHVRSSPCAREAPRHDADLETAVGPSQCAATVTI 185
V + GPEG + E V + +A ++ +E G C AT+T+
Sbjct: 2935 VQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEATLTV 2981
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 45 VLLQPGPEGADSDEHVRSSPCAREAPRHDADLETAVGPSQCAATVTI 185
V + GPEG + E V + +A ++ +E G C AT+T+
Sbjct: 2935 VQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEATLTV 2981
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 45 VLLQPGPEGADSDEHVRSSPCAREAPRHDADLETAVGPSQCAATVTI 185
V + GPEG + E V + +A ++ +E G C AT+T+
Sbjct: 2295 VQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEATLTV 2341
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 45 VLLQPGPEGADSDEHVRSSPCAREAPRHDADLETAVGPSQCAATVTI 185
V + GPEG + E V + +A ++ +E G C AT+T+
Sbjct: 2935 VQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEATLTV 2981
>U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical
protein F32E10.5 protein.
Length = 549
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 128 RCRLGDRCRSEPMRCHCHHCKYQFLLRGMCRARYEVRQEEPSR*GQWPPGPQSSRKSDHQ 307
RC++ C +EP + H KY+F+ MC R+ +PS+ G W P + +
Sbjct: 219 RCQI-TTC-TEPFQIVLCHPKYEFM--NMCSFLLAPRRGQPSQEGVWIPREIAKQLEREN 274
Query: 308 WFSH*SPEDS 337
F +DS
Sbjct: 275 GFERNDYDDS 284
>Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical
protein C53A5.13 protein.
Length = 681
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = -3
Query: 239 VEPHIELCTFHAEGTGTCNGDSGSALARTDSGLQVGIVSWGF 114
+EPH++ C F+ +GT C+ +++ + + + +VS GF
Sbjct: 571 IEPHLKTCGFNEQGTFKCD----MSISEVFTQIPIVLVSAGF 608
>Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical
protein F37D6.1 protein.
Length = 1227
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = +3
Query: 90 VRSSPCAREAPRHDADLETAVGPSQCAATVTIASTSSFCVECAELDMRFDRRSPHVKVNG 269
VR P R + + GPS + V I S ++CV C+ D + +NG
Sbjct: 605 VRPQPLPRTSSKSTIPYGKTSGPSSTSTQVGIFSYHTYCVHCSVDQEVSDDLKEKIPLNG 664
>U42832-2|AAA83572.1| 558|Caenorhabditis elegans
Udp-glucuronosyltransferase protein57 protein.
Length = 558
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 574 TVRRRFPERLPSVNTATMQ*AAVSTERAVSTEPPQTKLLMKIPL 705
T+++RF + P+VNT Q AA EPP+ L IP+
Sbjct: 243 TIKKRF-KNFPNVNTLKQQSAAYFVNTDPLLEPPRALPLNVIPV 285
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,586,027
Number of Sequences: 27780
Number of extensions: 384261
Number of successful extensions: 1323
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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