Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b15r
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    25   0.74 
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    25   0.74 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    24   0.98 
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    24   1.3  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    24   1.3  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   1.7  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   1.7  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    23   3.0  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    23   3.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.2  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   6.9  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   6.9  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   6.9  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   6.9  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   6.9  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 426 CMAPTAKYINHDKDKILYNSRLLK 497
           C   T KY N + D+IL + RLLK
Sbjct: 16  CEQYTTKYDNINVDEILASERLLK 39


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 438 TAKYINHDKDKILYNSRLLK 497
           T KY N D D+I+ + RLLK
Sbjct: 25  TTKYDNVDLDEIIKSDRLLK 44


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 438 TAKYINHDKDKILYNSRLL 494
           T +Y N D D+IL++ RLL
Sbjct: 35  TTRYDNVDVDRILHSKRLL 53


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 438 TAKYINHDKDKILYNSRLLK 497
           T KY N D ++IL + RLLK
Sbjct: 25  TTKYDNIDLEEILKSDRLLK 44


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 438 TAKYINHDKDKILYNSRLLK 497
           T KY N D + ++ N RLLK
Sbjct: 27  TTKYDNIDLENVVKNERLLK 46


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 438 TAKYINHDKDKILYNSRLLK 497
           T KY N D ++IL + RLLK
Sbjct: 23  TTKYDNIDLNQILKSDRLLK 42


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 438 TAKYINHDKDKILYNSRLLK 497
           T KY N D ++IL + RLLK
Sbjct: 23  TTKYDNIDLNQILKSDRLLK 42


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +3

Query: 435 PTAKYINHDKDKILYNSRL 491
           PT KY N D D IL+N RL
Sbjct: 22  PT-KYDNVDIDAILHNKRL 39


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +3

Query: 435 PTAKYINHDKDKILYNSRL 491
           PT KY N D D IL+N RL
Sbjct: 22  PT-KYDNVDIDAILHNKRL 39


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -1

Query: 657 YHCVYRIYLIVYVCCPM*YLNDLSL*IIKCLRKRMWNHYMFC 532
           ++CV  I L +Y       L  + L ++ C+    + H +FC
Sbjct: 228 FYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFC 269


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 453 NHDKDKILYNSRLLK*KLPFLIFYK 527
           NH K  I  + RL   K PF+  YK
Sbjct: 219 NHSKVHIREDKRLTCPKCPFITEYK 243


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 630 IVYVCCPM*YLN 595
           IVY CCP  Y++
Sbjct: 189 IVYACCPEPYVD 200


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 630 IVYVCCPM*YLN 595
           IVY CCP  Y++
Sbjct: 189 IVYACCPEPYVD 200


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 630 IVYVCCPM*YLN 595
           IVY CCP  Y++
Sbjct: 189 IVYACCPEPYVD 200


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 630 IVYVCCPM*YLN 595
           IVY CCP  Y++
Sbjct: 189 IVYACCPEPYVD 200


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 630 IVYVCCPM*YLN 595
           IVY CCP  Y++
Sbjct: 189 IVYACCPEPYVD 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,230
Number of Sequences: 336
Number of extensions: 3509
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)