Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b15r
         (669 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23172-11|AAL27245.1|  327|Caenorhabditis elegans Hypothetical p...    28   5.2  
U23172-10|AAM22066.1|  352|Caenorhabditis elegans Hypothetical p...    28   5.2  
U23172-9|AAK67227.1|  362|Caenorhabditis elegans Hypothetical pr...    28   5.2  
U23172-7|AAK67228.1|  376|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AC098856-5|AAR12980.1|  263|Caenorhabditis elegans Hypothetical ...    28   6.9  

>U23172-11|AAL27245.1|  327|Caenorhabditis elegans Hypothetical
           protein F25B5.3c protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 484 LDC*NKNYPFSFSINLTKHVVVPH 555
           +D  NK YP  FS NLT    +PH
Sbjct: 109 VDLKNKYYPIEFSPNLTMEEKIPH 132


>U23172-10|AAM22066.1|  352|Caenorhabditis elegans Hypothetical
           protein F25B5.3d protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 484 LDC*NKNYPFSFSINLTKHVVVPH 555
           +D  NK YP  FS NLT    +PH
Sbjct: 134 VDLKNKYYPIEFSPNLTMEEKIPH 157


>U23172-9|AAK67227.1|  362|Caenorhabditis elegans Hypothetical
           protein F25B5.3a protein.
          Length = 362

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 484 LDC*NKNYPFSFSINLTKHVVVPH 555
           +D  NK YP  FS NLT    +PH
Sbjct: 144 VDLKNKYYPIEFSPNLTMEEKIPH 167


>U23172-7|AAK67228.1|  376|Caenorhabditis elegans Hypothetical
           protein F25B5.3b protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 484 LDC*NKNYPFSFSINLTKHVVVPH 555
           +D  NK YP  FS NLT    +PH
Sbjct: 158 VDLKNKYYPIEFSPNLTMEEKIPH 181


>AC098856-5|AAR12980.1|  263|Caenorhabditis elegans Hypothetical
           protein Y37F4.5 protein.
          Length = 263

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 459 DKDKILYNSRLLK*KLPFLIFYKLNKTCSGSTFFY 563
           ++ +++Y S+ LK K+P L  YK+ +     +F Y
Sbjct: 43  ERGQLIYTSKQLKSKIPGLSVYKVRRIEDNHSFLY 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,552,588
Number of Sequences: 27780
Number of extensions: 295695
Number of successful extensions: 556
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)