BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b15r (669 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 25 0.49 DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 23 2.0 AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 23 2.0 AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 2.6 AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 2.6 DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 8.0 DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 8.0 >AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex determiner protein. Length = 426 Score = 25.4 bits (53), Expect = 0.49 Identities = 9/32 (28%), Positives = 17/32 (53%) Frame = +2 Query: 356 TVNKKKSCKRNRLFNVIQNVNHNLYGSYRKIH 451 T++ + N N N N+N Y +Y+K++ Sbjct: 322 TIHNNNNYNNNNYNNNYNNYNNNNYNNYKKLY 353 >DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6 protein. Length = 125 Score = 23.4 bits (48), Expect = 2.0 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +3 Query: 438 TAKYINHDKDKILYNSRLL 494 T KY + D D+IL N R+L Sbjct: 22 TTKYDDMDIDRILQNGRIL 40 >AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein protein. Length = 125 Score = 23.4 bits (48), Expect = 2.0 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +3 Query: 438 TAKYINHDKDKILYNSRLL 494 T KY + D D+IL N R+L Sbjct: 22 TTKYDDMDIDRILQNGRIL 40 >AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methyltransferase protein. Length = 683 Score = 23.0 bits (47), Expect = 2.6 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = -3 Query: 514 RKGNFYFNNRELYKILS 464 RK NFY NN+++ K L+ Sbjct: 304 RKVNFYPNNQDIEKFLN 320 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 23.0 bits (47), Expect = 2.6 Identities = 9/21 (42%), Positives = 11/21 (52%) Frame = +2 Query: 605 YIGQQT*TIKYILYTQWYLFN 667 Y+G + I ILY WY N Sbjct: 797 YVGSEDSVIPRILYLTWYSSN 817 >DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 8.0 Identities = 7/22 (31%), Positives = 14/22 (63%) Frame = +2 Query: 386 NRLFNVIQNVNHNLYGSYRKIH 451 N+ + N N+N Y +Y+K++ Sbjct: 87 NKTIHNNNNYNNNNYNNYKKLY 108 >DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex determiner protein. Length = 191 Score = 21.4 bits (43), Expect = 8.0 Identities = 9/32 (28%), Positives = 17/32 (53%) Frame = +2 Query: 356 TVNKKKSCKRNRLFNVIQNVNHNLYGSYRKIH 451 T++ + N N N N+N Y +Y+K++ Sbjct: 89 TIHNNNNYNNNNYNNY--NYNNNNYNNYKKLY 118 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 187,969 Number of Sequences: 438 Number of extensions: 3992 Number of successful extensions: 15 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 15 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20221290 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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