Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b15r
         (669 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g31550.1 68415.m03854 GDSL-motif lipase/hydrolase family prot...    29   3.7  
At1g20130.1 68414.m02518 family II extracellular lipase, putativ...    29   3.7  
At2g30310.1 68415.m03689 GDSL-motif lipase/hydrolase family prot...    27   8.5  
At2g30220.1 68415.m03676 GDSL-motif lipase/hydrolase family prot...    27   8.5  

>At2g31550.1 68415.m03854 GDSL-motif lipase/hydrolase family protein
           similar to family II lipase EXL3 (GI:15054386), EXL1
           (GI:15054382), EXL2 (GI:15054384) [Arabidopsis
           thaliana]; contains Pfam profile PF00657:
           Lipase/Acylhydrolase with GDSL-like motif
          Length = 219

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 453 NHDKDKILYNSRLLK*KLPFLIFYKLNKTCSGSTFFYVDI 572
           +H+KD +LYN +L K  LP     ++  +  GS F Y D+
Sbjct: 108 HHNKDSVLYNEKLQK-LLP-----QIEASLPGSKFLYADV 141


>At1g20130.1 68414.m02518 family II extracellular lipase, putative
           contains Pfam profile PF00657: GDSL-like
           Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
          Length = 1006

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 465 DKILYNSRLLK*KLPFLIFYKLNKTCSGSTFFYVDI 572
           +++ Y S+L   KL  LI  +L+KT   STF Y+DI
Sbjct: 364 EELNYASQLFNSKL-LLILGQLSKTLPNSTFVYMDI 398


>At2g30310.1 68415.m03689 GDSL-motif lipase/hydrolase family protein
           similar to family II lipases EXL3 GI:15054386, EXL1
           GI:15054382 from [Arabidopsis thaliana]; contains Pfam
           profile PF00657: GDSL-like Lipase/Acylhydrolase
          Length = 359

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +3

Query: 459 DKDKILYNSRLLK*KLPFLIFYKLNKTCSGSTFFYVDI 572
           +KD +LYN +L+K KLP     ++  +  GS F Y ++
Sbjct: 250 NKDSVLYNQKLVK-KLP-----EIQASLPGSNFLYANV 281


>At2g30220.1 68415.m03676 GDSL-motif lipase/hydrolase family protein
           similar to family II lipases EXL3 GI:15054386, EXL1
           GI:15054382, EXL2 GI:15054384 from [Arabidopsis
           thaliana]; contains Pfam profile PF00657: GDSL-like
           Lipase/Acylhydrolase
          Length = 358

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 459 DKDKILYNSRLLK*KLPFLIFYKLNKTCSGSTFFYVDI 572
           +KD ILYN +L+K KLP     ++  +  GS F Y ++
Sbjct: 249 NKDSILYNQKLVK-KLP-----EIQASLPGSKFLYANV 280


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,071,175
Number of Sequences: 28952
Number of extensions: 246950
Number of successful extensions: 372
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)