Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b15f
(640 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X55544-1|CAA39150.1| 271|Homo sapiens TREB protein protein. 36 0.092
BC029619-1|AAH29619.1| 271|Homo sapiens activating transcriptio... 36 0.092
AJ295163-1|CAC15058.1| 226|Homo sapiens FUS/ATF-1 protein protein. 36 0.092
S83182-1|AAB46909.1| 560|Homo sapiens hyaluronan-binding protei... 31 4.6
D49742-1|BAA08576.1| 560|Homo sapiens HGF activator like protei... 31 4.6
BC031412-1|AAH31412.1| 560|Homo sapiens hyaluronan binding prot... 31 4.6
AY534754-1|AAS16352.1| 560|Homo sapiens hyaluronan binding prot... 31 4.6
AL390197-1|CAH71108.1| 560|Homo sapiens hyaluronan binding prot... 31 4.6
BC130656-1|AAI30657.1| 126|Homo sapiens hypothetical gene suppo... 30 8.0
BC130299-1|AAI30300.1| 126|Homo sapiens hypothetical gene suppo... 30 8.0
AK096941-1|BAC04907.1| 126|Homo sapiens protein ( Homo sapiens ... 30 8.0
>X55544-1|CAA39150.1| 271|Homo sapiens TREB protein protein.
Length = 271
Score = 36.3 bits (80), Expect = 0.092
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = +3
Query: 378 VQLTLPSQAPSAQVQSVIQPNQQSVIQTASNIQSVQIPKGNVILVSKPSSVIHTTQGTLQ 557
+QL P +Q++ N S Q + +Q Q G ILV V+ T G +Q
Sbjct: 118 LQLASPGTDGVQGLQTLTMTNSGSTQQGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQ 177
Query: 558 TLQIKPEPN 584
T QI+ P+
Sbjct: 178 TYQIRTTPS 186
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +3
Query: 387 TLPSQAPSAQVQSVIQPNQQSVIQTAS-NIQSVQIPKGNVILVSKPSSVIHTTQGTLQTL 563
T+ A ++ Q ++ P+ Q V+QTAS ++Q+ QI + S P +V+ T+ TL +
Sbjct: 147 TILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQI-RTTPSATSLPQTVVMTSPVTLTSQ 205
Query: 564 QIKPE 578
K +
Sbjct: 206 TTKTD 210
>BC029619-1|AAH29619.1| 271|Homo sapiens activating transcription
factor 1 protein.
Length = 271
Score = 36.3 bits (80), Expect = 0.092
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = +3
Query: 378 VQLTLPSQAPSAQVQSVIQPNQQSVIQTASNIQSVQIPKGNVILVSKPSSVIHTTQGTLQ 557
+QL P +Q++ N S Q + +Q Q G ILV V+ T G +Q
Sbjct: 118 LQLASPGTDGVQGLQTLTMTNSGSTQQGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQ 177
Query: 558 TLQIKPEPN 584
T QI+ P+
Sbjct: 178 TYQIRTTPS 186
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +3
Query: 387 TLPSQAPSAQVQSVIQPNQQSVIQTAS-NIQSVQIPKGNVILVSKPSSVIHTTQGTLQTL 563
T+ A ++ Q ++ P+ Q V+QTAS ++Q+ QI + S P +V+ T+ TL +
Sbjct: 147 TILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQI-RTTPSATSLPQTVVMTSPVTLTSQ 205
Query: 564 QIKPE 578
K +
Sbjct: 206 TTKTD 210
>AJ295163-1|CAC15058.1| 226|Homo sapiens FUS/ATF-1 protein protein.
Length = 226
Score = 36.3 bits (80), Expect = 0.092
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = +3
Query: 378 VQLTLPSQAPSAQVQSVIQPNQQSVIQTASNIQSVQIPKGNVILVSKPSSVIHTTQGTLQ 557
+QL P +Q++ N S Q + +Q Q G ILV V+ T G +Q
Sbjct: 99 LQLASPGTDGVQGLQTLTMTNSGSTQQGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQ 158
Query: 558 TLQIKPEPN 584
T QI+ P+
Sbjct: 159 TYQIRTTPS 167
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +3
Query: 387 TLPSQAPSAQVQSVIQPNQQSVIQTAS-NIQSVQIPKGNVILVSKPSSVIHTTQGTLQTL 563
T+ A ++ Q ++ P+ Q V+QTAS ++Q+ QI + S P +V+ T+ TL +
Sbjct: 128 TILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQI-RTTPSATSLPQTVVMTSPVTLTSQ 186
Query: 564 QIKPE 578
K +
Sbjct: 187 TTKTD 191
>S83182-1|AAB46909.1| 560|Homo sapiens hyaluronan-binding protein
protein.
Length = 560
Score = 30.7 bits (66), Expect = 4.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 294 WCRSLQPSLPCQLRSPVTYSSSPSMLRPEWVNGKVRSSHVNCEKTRH 154
W SLQ SLP + P + +++ P WV + ++H KTRH
Sbjct: 327 WQASLQSSLPLTISMPQGHFCGGALIHPCWV---LTAAHCTDIKTRH 370
>D49742-1|BAA08576.1| 560|Homo sapiens HGF activator like protein
protein.
Length = 560
Score = 30.7 bits (66), Expect = 4.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 294 WCRSLQPSLPCQLRSPVTYSSSPSMLRPEWVNGKVRSSHVNCEKTRH 154
W SLQ SLP + P + +++ P WV + ++H KTRH
Sbjct: 327 WQASLQSSLPLTISMPQGHFCGGALIHPCWV---LTAAHCTDIKTRH 370
>BC031412-1|AAH31412.1| 560|Homo sapiens hyaluronan binding protein
2 protein.
Length = 560
Score = 30.7 bits (66), Expect = 4.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 294 WCRSLQPSLPCQLRSPVTYSSSPSMLRPEWVNGKVRSSHVNCEKTRH 154
W SLQ SLP + P + +++ P WV + ++H KTRH
Sbjct: 327 WQASLQSSLPLTISMPQGHFCGGALIHPCWV---LTAAHCTDIKTRH 370
>AY534754-1|AAS16352.1| 560|Homo sapiens hyaluronan binding protein
2 protein.
Length = 560
Score = 30.7 bits (66), Expect = 4.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 294 WCRSLQPSLPCQLRSPVTYSSSPSMLRPEWVNGKVRSSHVNCEKTRH 154
W SLQ SLP + P + +++ P WV + ++H KTRH
Sbjct: 327 WQASLQSSLPLTISMPQGHFCGGALIHPCWV---LTAAHCTDIKTRH 370
>AL390197-1|CAH71108.1| 560|Homo sapiens hyaluronan binding protein
2 protein.
Length = 560
Score = 30.7 bits (66), Expect = 4.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 294 WCRSLQPSLPCQLRSPVTYSSSPSMLRPEWVNGKVRSSHVNCEKTRH 154
W SLQ SLP + P + +++ P WV + ++H KTRH
Sbjct: 327 WQASLQSSLPLTISMPQGHFCGGALIHPCWV---LTAAHCTDIKTRH 370
>BC130656-1|AAI30657.1| 126|Homo sapiens hypothetical gene
supported by AK128882 protein.
Length = 126
Score = 29.9 bits (64), Expect = 8.0
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 396 WVE*VVLYW*QHEEWNPVSKSSRWPVDPSCQHRLWCRSLQPSLPCQLRSPVTYSSSPSML 217
WV V YW + + N + W + SC H L+ S P+ PV YS + L
Sbjct: 16 WVPEFVAYWRKTHQGNLQTLLLHWLLLCSCLHHLYNASCHPAF------PVEYSHAVCCL 69
Query: 216 RPEW 205
+P +
Sbjct: 70 QPRF 73
>BC130299-1|AAI30300.1| 126|Homo sapiens hypothetical gene
supported by AK128882 protein.
Length = 126
Score = 29.9 bits (64), Expect = 8.0
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 396 WVE*VVLYW*QHEEWNPVSKSSRWPVDPSCQHRLWCRSLQPSLPCQLRSPVTYSSSPSML 217
WV V YW + + N + W + SC H L+ S P+ PV YS + L
Sbjct: 16 WVPEFVAYWRKTHQGNLQTLLLHWLLLCSCLHHLYNASCHPAF------PVEYSHAVCCL 69
Query: 216 RPEW 205
+P +
Sbjct: 70 QPRF 73
>AK096941-1|BAC04907.1| 126|Homo sapiens protein ( Homo sapiens
cDNA FLJ39622 fis, clone SMINT2001199. ).
Length = 126
Score = 29.9 bits (64), Expect = 8.0
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -2
Query: 396 WVE*VVLYW*QHEEWNPVSKSSRWPVDPSCQHRLWCRSLQPSLPCQLRSPVTYSSSPSML 217
WV V YW + + N + W + SC H L+ S P+ PV YS + L
Sbjct: 16 WVPEFVAYWRKTHQGNLQTLLLHWLLLCSCLHHLYNASCHPTF------PVEYSHAVCCL 69
Query: 216 RPEW 205
+P +
Sbjct: 70 QPRF 73
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,418,209
Number of Sequences: 237096
Number of extensions: 1878883
Number of successful extensions: 3364
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3364
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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