Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b15f
         (640 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.1  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    23   3.3  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    23   3.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   3.3  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   4.4  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   4.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   4.4  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   5.8  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   7.6  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
 Frame = -2

Query: 294 WCRSLQPSLPCQL---RSPVTYSSSPSMLRP 211
           W   L+P  PCQL   +  V YSS  S   P
Sbjct: 178 WPEELEPGTPCQLTRRQGYVIYSSLGSFFIP 208


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
 Frame = -2

Query: 294 WCRSLQPSLPCQL---RSPVTYSSSPSMLRP 211
           W   L+P  PCQL   +  V YSS  S   P
Sbjct: 178 WPEELEPGTPCQLTRRQGYVIYSSLGSFFIP 208


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
 Frame = -2

Query: 294 WCRSLQPSLPCQL---RSPVTYSSSPSMLRP 211
           W   L+P  PCQL   +  V YSS  S   P
Sbjct: 178 WPEELEPGTPCQLTRRQGYVIYSSLGSFFIP 208


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 85  VKNSQFTITVSNGCYKL*NYNKKL 14
           + N+ +    +N  Y   NYNKKL
Sbjct: 89  IHNNNYKYNYNNNNYNNNNYNKKL 112


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 85  VKNSQFTITVSNGCYKL*NYNKKL 14
           + N+ +    +N  Y   NYNKKL
Sbjct: 89  IHNNNYKYNYNNNNYNNNNYNKKL 112


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 170 QLTWLLRTFPFTHSGRSIDGDEEYVTGDL 256
           Q+TW L  F    +GR + G    V GD+
Sbjct: 452 QVTWALDGFALPTNGRFMIGQYVTVHGDV 480


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 170 QLTWLLRTFPFTHSGRSIDGDEEYVTGDL 256
           Q+TW L  F    +GR + G    V GD+
Sbjct: 452 QVTWALDGFALPTNGRFMIGQYVTVHGDV 480


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 513 SKPSSVIHTTQGTLQTLQIKPEPNTLVNTQGQSCSDES 626
           + P+S+ + T+  ++T  I+PE  T V+T+     D S
Sbjct: 126 ASPTSIPYATRAEIKTESIQPE-TTKVDTREVQPHDAS 162


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +2

Query: 164 FSQLTWLLRTFPFTHSGRSIDGDEE 238
           F +L     T    HS  SIDGDEE
Sbjct: 96  FKRLELFNITTTTIHSIHSIDGDEE 120


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +3

Query: 447 SVIQTASNIQSVQIPKGNVILVSKPSSVIHTTQGTLQTLQIKPEPNTLVN 596
           SV       Q+    +GN  L    S++  ++ G    L +KP+  +L+N
Sbjct: 10  SVTAIIQGTQAQHWSRGNTWLSLDNSNMSMSSVGPQSPLDMKPDTASLIN 59


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +3

Query: 447 SVIQTASNIQSVQIPKGNVILVSKPSSVIHTTQGTLQTLQIKPEPNTLVN 596
           SV       Q+    +GN  L    S++  ++ G    L +KP+  +L+N
Sbjct: 10  SVTAIIQGTQAQHWSRGNTWLSLDNSNMSMSSVGPQSPLDMKPDTASLIN 59


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 462 ASNIQSVQIPKGNVILVSKPSSVI 533
           ++ ++S+    GN IL +KPS V+
Sbjct: 358 SAKVRSMFNDSGNPILKAKPSEVV 381


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -2

Query: 348 PVSKSSRWPVDPSCQHRLWCRSLQPS 271
           P++   +W V+   + R W R  +P+
Sbjct: 28  PITGDEKWVVNNIKRKRWWSRPREPA 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,670
Number of Sequences: 438
Number of extensions: 3605
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)