Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b14f
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.6  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   1.6  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   1.6  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.4  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 507 PISSQLNFQNSESLSGSNLV 448
           PIS+ L+  NS S S +NL+
Sbjct: 321 PISASLSTSNSNSPSSTNLI 340


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 507 PISSQLNFQNSESLSGSNLV 448
           PIS+ L+  NS S S +NL+
Sbjct: 110 PISASLSTSNSNSPSSTNLI 129


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 507 PISSQLNFQNSESLSGSNLV 448
           PIS+ L+  NS S S +NL+
Sbjct: 110 PISASLSTSNSNSPSSTNLI 129


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 443 AHTKLDPDNDSEFWKFSWEEIG 508
           AHT L  D+D ++   + EE+G
Sbjct: 192 AHTPLTDDHDEKYGVPTLEELG 213


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 386  PKCMLSQDLDPSEP 345
            PKC+L +D D ++P
Sbjct: 2197 PKCILGRDNDKTKP 2210


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -2

Query: 195 YPYFVISPTISRRASS 148
           YPY ++SP +S+ A+S
Sbjct: 172 YPYPILSPEMSQVAAS 187


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -2

Query: 195 YPYFVISPTISRRASS 148
           YPY ++SP +S+ A+S
Sbjct: 64  YPYPILSPEMSQVAAS 79


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 407 WLGNARGTYYSRAHTKL 457
           W+    GT++  AHT L
Sbjct: 233 WIAGNAGTHFWHAHTGL 249


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 407 WLGNARGTYYSRAHTKL 457
           W+    GT++  AHT L
Sbjct: 233 WIAGNAGTHFWHAHTGL 249


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 434 NMYHVRFQATHHNQLQPKCMLSQ 366
           N Y   +  T++ Q+QP  + SQ
Sbjct: 299 NYYAQNYAPTYYGQMQPDYLNSQ 321


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,233
Number of Sequences: 336
Number of extensions: 3759
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)