BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b14f (625 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 23 1.6 AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 23 1.6 AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 23 1.6 EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 22 4.8 DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 4.8 AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 4.8 AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 22 4.8 AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 8.4 AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 8.4 AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 8.4 >AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain transcription factor Labialprotein. Length = 353 Score = 23.4 bits (48), Expect = 1.6 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -2 Query: 507 PISSQLNFQNSESLSGSNLV 448 PIS+ L+ NS S S +NL+ Sbjct: 321 PISASLSTSNSNSPSSTNLI 340 >AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein protein. Length = 142 Score = 23.4 bits (48), Expect = 1.6 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -2 Query: 507 PISSQLNFQNSESLSGSNLV 448 PIS+ L+ NS S S +NL+ Sbjct: 110 PISASLSTSNSNSPSSTNLI 129 >AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein protein. Length = 142 Score = 23.4 bits (48), Expect = 1.6 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -2 Query: 507 PISSQLNFQNSESLSGSNLV 448 PIS+ L+ NS S S +NL+ Sbjct: 110 PISASLSTSNSNSPSSTNLI 129 >EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 protein. Length = 535 Score = 21.8 bits (44), Expect = 4.8 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = +2 Query: 443 AHTKLDPDNDSEFWKFSWEEIG 508 AHT L D+D ++ + EE+G Sbjct: 192 AHTPLTDDHDEKYGVPTLEELG 213 >DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein. Length = 2700 Score = 21.8 bits (44), Expect = 4.8 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -3 Query: 386 PKCMLSQDLDPSEP 345 PKC+L +D D ++P Sbjct: 2197 PKCILGRDNDKTKP 2210 >AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. Length = 790 Score = 21.8 bits (44), Expect = 4.8 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = -2 Query: 195 YPYFVISPTISRRASS 148 YPY ++SP +S+ A+S Sbjct: 172 YPYPILSPEMSQVAAS 187 >AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. Length = 682 Score = 21.8 bits (44), Expect = 4.8 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = -2 Query: 195 YPYFVISPTISRRASS 148 YPY ++SP +S+ A+S Sbjct: 64 YPYPILSPEMSQVAAS 79 >AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. Length = 712 Score = 21.0 bits (42), Expect = 8.4 Identities = 7/17 (41%), Positives = 10/17 (58%) Frame = +2 Query: 407 WLGNARGTYYSRAHTKL 457 W+ GT++ AHT L Sbjct: 233 WIAGNAGTHFWHAHTGL 249 >AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. Length = 717 Score = 21.0 bits (42), Expect = 8.4 Identities = 7/17 (41%), Positives = 10/17 (58%) Frame = +2 Query: 407 WLGNARGTYYSRAHTKL 457 W+ GT++ AHT L Sbjct: 233 WIAGNAGTHFWHAHTGL 249 >AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 protein protein. Length = 371 Score = 21.0 bits (42), Expect = 8.4 Identities = 8/23 (34%), Positives = 13/23 (56%) Frame = -3 Query: 434 NMYHVRFQATHHNQLQPKCMLSQ 366 N Y + T++ Q+QP + SQ Sbjct: 299 NYYAQNYAPTYYGQMQPDYLNSQ 321 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 162,233 Number of Sequences: 336 Number of extensions: 3759 Number of successful extensions: 12 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 122,585 effective HSP length: 54 effective length of database: 104,441 effective search space used: 15979473 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -