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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b14f
         (625 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos...   116   3e-27
SPBC16A3.12c |||triglyceride lipase-cholesterol esterase |Schizo...   116   3e-27
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos...    96   3e-21
SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|c...    27   1.7  
SPAC2F7.04 |pmc2|med1|RNA polymerase II holoenzyme mediator comp...    27   2.2  
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ...    26   5.1  
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe...    26   5.1  
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb...    25   6.7  
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||...    25   6.7  
SPAC2G11.03c |vps45||vacuolar sorting protein Vps 45|Schizosacch...    25   6.7  
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb...    25   8.9  

>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 467

 Score =  116 bits (279), Expect = 3e-27
 Identities = 68/149 (45%), Positives = 84/149 (56%), Gaps = 5/149 (3%)
 Frame = +2

Query: 191 GYPVEVHKVVTEDGYILEMQRIPHGRDQNNR---PDPRK-PAVLVMHGLFASAADWVL-M 355
           GY VE H V TED YIL + RI   +D   R   P P+K P V   HGL  ++  WV  +
Sbjct: 89  GYYVEDHLVRTEDDYILCIHRI--SKDSPGRIGSPHPKKLPVVYCHHGLLMNSEVWVCNV 146

Query: 356 GPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWKFSWEEIGTRDLPAMID 535
            P   L + L   GYDVWLGN RG  YSR H + D   D EFW FS ++    D+P  ID
Sbjct: 147 DPRNCLVFDLVNKGYDVWLGNNRGNKYSRQHLRFD-STDKEFWDFSIDDFAQYDIPDTID 205

Query: 536 YTLKVAGKRRLHYIGHSQGTTVFWAMGSL 622
           Y LK +G+ +L YIG SQGT   +A  S+
Sbjct: 206 YILKTSGQTKLTYIGFSQGTAQAFASLSI 234


>SPBC16A3.12c |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 443

 Score =  116 bits (279), Expect = 3e-27
 Identities = 58/145 (40%), Positives = 83/145 (57%), Gaps = 1/145 (0%)
 Frame = +2

Query: 164 DIVGLITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLVMHGLFASAAD 343
           +I  +   +GY VE H V T+D +IL + RI H +   ++    +  V   HGL  ++  
Sbjct: 74  NIYEICEAFGYRVEEHLVRTQDNFILCLHRITHPKQSQHK----REVVYCHHGLMTNSEL 129

Query: 344 WVLMGPG-LGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWKFSWEEIGTRDL 520
           WV +      L ++L E+GYDVWLGN RG  YSR H    P  D EFW FS +++   D+
Sbjct: 130 WVAVNESERSLPFVLIESGYDVWLGNNRGNKYSRKHITYKP-KDEEFWNFSLDDMAMFDI 188

Query: 521 PAMIDYTLKVAGKRRLHYIGHSQGT 595
           P  +DY L+  G+ +L+YIG SQGT
Sbjct: 189 PDTVDYILRETGREKLNYIGFSQGT 213


>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score = 96.3 bits (229), Expect = 3e-21
 Identities = 53/154 (34%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
 Frame = +2

Query: 164 DIVGLITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLVMHGLFASAAD 343
           D + L   +GY +E H V T DGY+L + R+   +          P VL +HGL  ++  
Sbjct: 74  DTIDLCALHGYDLEEHFVRTTDGYLLGLHRVYKKKKGKIEELNYLPPVLFIHGLMMNSES 133

Query: 344 WVL-MGPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWKFSWEEIGTRDL 520
           WV  +     + + L E GYDVWLGN RG  YS  + K    N  +FW FS + I   D+
Sbjct: 134 WVCNLKKEDAIPFALVEQGYDVWLGNLRGNKYSIKNIKFSSQN-PKFWDFSLDSIAIFDI 192

Query: 521 PAMIDYTLKVAGKRRLHYIGHSQGTTVFWAMGSL 622
           P+++ Y L V     +  +G SQG  + +A  S+
Sbjct: 193 PSIVKYILSVNSFDSISLVGFSQGAILAFAALSI 226


>SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 585

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -3

Query: 440 WSNMYHVRFQATHHNQLQPKCMLSQ-DLDPSEPSQQQK 330
           W     VR QATHHN    +  +   DLD S+  +  +
Sbjct: 27  WPLQPQVRLQATHHNNDSAESAIGMLDLDDSDDDENNR 64


>SPAC2F7.04 |pmc2|med1|RNA polymerase II holoenzyme mediator complex
           subunit |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 454

 Score = 27.1 bits (57), Expect = 2.2
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = -1

Query: 208 NFNWISIFRDKSNNIQKSIFSYIGRVTGTLS 116
           N  W++ F   S ++Q+S F Y+  ++ +L+
Sbjct: 128 NVKWLATFDHSSPSVQQSCFQYLDSLSSSLN 158


>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 582

 Score = 25.8 bits (54), Expect = 5.1
 Identities = 18/55 (32%), Positives = 21/55 (38%)
 Frame = +2

Query: 116 AQGSRYSTNVTEDALLDIVGLITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNN 280
           +QG  YSTN   DA  DI      Y           E  Y    +  PH + QNN
Sbjct: 198 SQGYMYSTNTAHDA-TDIPSSFNFYNTQASTAPNPQEINYQWSHEYRPHTQYQNN 251


>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1465

 Score = 25.8 bits (54), Expect = 5.1
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -2

Query: 390 SAKMYAKPRPGPIRTQSAAEAKSPCITKTAGFLGSGRLFW 271
           S+  Y   +  PIR +   + K  C+ +T   +  G++ W
Sbjct: 849 SSNKYKSRKRNPIRQKVTEDDKGKCVAQTDELVQRGKVKW 888


>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 394

 Score = 25.4 bits (53), Expect = 6.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 407 THHNQLQPKCMLSQDLDPSEPSQQQKQKVHA 315
           TH N  +   ML QD+DP+ P  + +   HA
Sbjct: 310 THANSKR-SIMLPQDIDPTFPDSEPEDDGHA 339


>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 3971

 Score = 25.4 bits (53), Expect = 6.7
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -2

Query: 615  PIAQKTVVPCE*PI**SRLFPATFKV*SIIAGRSRVPISSQLNFQNSESLSGSNLV 448
            PI   TVV    PI  S +  ++  + S+ A  S  PI+S     +S  ++ S +V
Sbjct: 2543 PITSSTVVNTSTPITSSTVVNSSTPITSLTALNSSTPITSSSVLNSSTPITSSTVV 2598


>SPAC2G11.03c |vps45||vacuolar sorting protein Vps
           45|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 558

 Score = 25.4 bits (53), Expect = 6.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 244 F*DIAIFSNDLVNFNWISIFRDKSNNIQKSIF 149
           F D  + +NDL +FN   I  D  +N Q   F
Sbjct: 124 FLDYLVVNNDLASFNIPHIIEDSPDNWQDGAF 155


>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1254

 Score = 25.0 bits (52), Expect = 8.9
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -3

Query: 98  PRRNPHEGIGEQSPG 54
           P+R PH+ +GE+SPG
Sbjct: 117 PKR-PHDSLGEESPG 130


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,815,739
Number of Sequences: 5004
Number of extensions: 60603
Number of successful extensions: 230
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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