BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b14f (625 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_02_1358 - 26372559-26372887,26373183-26373262,26373287-263734... 135 3e-32 04_03_0156 - 11963580-11963914,11964422-11964517,11964618-119646... 98 4e-21 09_01_0014 + 357398-357583,360213-360323,360520-360676,361067-36... 93 2e-19 06_03_0852 - 25371461-25371783,25372080-25372159,25372472-253725... 64 9e-11 01_05_0146 + 18591235-18591345,18591662-18591830,18592282-185923... 48 6e-06 01_05_0145 + 18588201-18588242,18588925-18589044,18589201-185894... 41 7e-04 09_04_0366 + 16970063-16970254,16970697-16970720,16972440-16973591 33 0.24 11_04_0332 + 16465360-16465769,16465873-16466272,16466379-164664... 29 4.0 01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 29 4.0 09_04_0713 - 19675437-19675551,19675872-19676017,19676226-196762... 28 6.9 06_01_0390 + 2802334-2802339,2802461-2802618,2802755-2802826,280... 28 6.9 01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 27 9.2 >08_02_1358 - 26372559-26372887,26373183-26373262,26373287-26373420, 26373546-26373689,26373809-26373919,26374165-26374305, 26376839-26376964,26377072-26377263 Length = 418 Score = 135 bits (326), Expect = 3e-32 Identities = 64/145 (44%), Positives = 88/145 (60%), Gaps = 4/145 (2%) Frame = +2 Query: 179 ITKYGYPVEVHKVVTEDGYILEMQRIPHGR----DQNNRPDPRKPAVLVMHGLFASAADW 346 + +GYP E H+V T+DGYIL +QRIP GR R+P VL+ HG+ W Sbjct: 53 VAPFGYPCEEHEVTTQDGYILGLQRIPRGRIGGVTGGGAAAARQP-VLLQHGVLVDGMTW 111 Query: 347 VLMGPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWKFSWEEIGTRDLPA 526 +L P L YILA+ G+DVW+ N RGT +S H LDP + S +W +SW++I D+PA Sbjct: 112 LLGSPEESLPYILADQGFDVWIANNRGTRWSSRHVSLDPKSRS-YWNWSWDDIVVNDMPA 170 Query: 527 MIDYTLKVAGKRRLHYIGHSQGTTV 601 ++DY G++ HY+GHS GT V Sbjct: 171 IVDYVCSHTGQKP-HYVGHSMGTLV 194 >04_03_0156 - 11963580-11963914,11964422-11964517,11964618-11964697, 11965250-11965290,11965402-11965548,11965922-11966035, 11968842-11968961,11969491-11969631,11969892-11970014, 11970357-11970566 Length = 468 Score = 98.3 bits (234), Expect = 4e-21 Identities = 46/95 (48%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Frame = +2 Query: 179 ITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQN--NRPDPRKPAVLVMHGLFASAADWVL 352 + +GY E H V TEDGYIL +QRIP GR + K VL+ HGL W++ Sbjct: 59 VAPFGYACEEHTVTTEDGYILSLQRIPSGRGETAAGGGGGGKVPVLLQHGLMMDGVTWLM 118 Query: 353 MGPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKL 457 P L YILA+ GYDVW+ N+RGT YSR HT L Sbjct: 119 NSPNESLGYILADNGYDVWIANSRGTVYSRHHTSL 153 Score = 54.8 bits (126), Expect = 5e-08 Identities = 17/41 (41%), Positives = 31/41 (75%) Frame = +2 Query: 479 FWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGTTV 601 +W +SW+E+ ++DL A++ Y AG++++HY+GHS GT + Sbjct: 200 YWNWSWDELSSKDLSAVVQYVYSQAGQQKMHYVGHSLGTLI 240 >09_01_0014 + 357398-357583,360213-360323,360520-360676,361067-361233, 362012-362122,362206-362349,362436-362476,364134-364174, 364175-364261,365402-365724 Length = 455 Score = 93.1 bits (221), Expect = 2e-19 Identities = 44/115 (38%), Positives = 62/115 (53%), Gaps = 2/115 (1%) Frame = +2 Query: 176 LITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLVMHGLFASAADWVLM 355 L+ GYP H V T+DG++L +Q IPHG+ N D P V + HGLF W + Sbjct: 50 LLLPLGYPCTEHNVETKDGFLLSLQHIPHGK--NKAADSTGPPVFLQHGLFQGGDTWFIN 107 Query: 356 GPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDN--DSEFWKFSWEEIGTR 514 L YILA+ G+DVW+GN RGT +S+ H+ + ++ W W +G R Sbjct: 108 SAEQSLGYILADNGFDVWIGNVRGTRWSKGHSTFSVHDKVNTLHWN-EWRALGLR 161 Score = 43.6 bits (98), Expect = 1e-04 Identities = 18/39 (46%), Positives = 26/39 (66%) Frame = +2 Query: 479 FWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGT 595 FW +SW+E+ DL AM+ Y V + ++ Y+GHSQGT Sbjct: 209 FWDWSWQELAEYDLLAMLGYVYTVT-QSKILYVGHSQGT 246 >06_03_0852 - 25371461-25371783,25372080-25372159,25372472-25372554, 25372597-25372740,25372836-25372946,25373238-25373354, 25373436-25373562,25374160-25374296 Length = 373 Score = 64.1 bits (149), Expect = 9e-11 Identities = 26/53 (49%), Positives = 35/53 (66%) Frame = +2 Query: 188 YGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLVMHGLFASAADW 346 +GYP E +KV TEDGYIL ++RIPHG +N +P VL+ HGL + +W Sbjct: 80 FGYPCEEYKVTTEDGYILSLKRIPHGPHDSNTSTEMRPPVLLFHGLMVAYWEW 132 Score = 48.0 bits (109), Expect = 6e-06 Identities = 18/44 (40%), Positives = 31/44 (70%) Frame = +2 Query: 479 FWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGTTVFWA 610 +W++SW+E+ + DLPA++ + G+ ++HYIGHS GT + A Sbjct: 129 YWEWSWDELASYDLPAVLQFAYDHTGE-KIHYIGHSLGTLMILA 171 >01_05_0146 + 18591235-18591345,18591662-18591830,18592282-18592334, 18592369-18592487,18592618-18593698 Length = 510 Score = 48.0 bits (109), Expect = 6e-06 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 5/65 (7%) Frame = +2 Query: 392 AGYDVWLGNARGTYYSRAHTKLDPDNDS-EFWKFSWEEIGTRDLPAMIDYTLKV----AG 556 AGYDV+LGN RG SR H +D + S ++WK+S E GT+D+PA+++ K+ G Sbjct: 125 AGYDVFLGNLRGLV-SREH--VDKNISSYKYWKYSVNEHGTKDMPAIVEEIHKIKTSELG 181 Query: 557 KRRLH 571 K R H Sbjct: 182 KSRPH 186 >01_05_0145 + 18588201-18588242,18588925-18589044,18589201-18589457, 18589980-18590048,18590091-18590115 Length = 170 Score = 41.1 bits (92), Expect = 7e-04 Identities = 17/28 (60%), Positives = 22/28 (78%) Frame = +2 Query: 176 LITKYGYPVEVHKVVTEDGYILEMQRIP 259 +IT+ GYP E KVVT DGY+L ++RIP Sbjct: 135 VITELGYPFEAIKVVTSDGYVLLLERIP 162 >09_04_0366 + 16970063-16970254,16970697-16970720,16972440-16973591 Length = 455 Score = 32.7 bits (71), Expect = 0.24 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = +2 Query: 383 LAEAGYDVWLGNARGTYYSRA-HTKLDPDNDSEFWKFSWEEIGTRDLPAMIDYTLKVAGK 559 L +AG+ V+ + GTY+ HT DND EF ++ E+G +P + Y GK Sbjct: 370 LKDAGFIVYPSS--GTYFVMVDHTPFGFDNDIEFCEYLIREVGVVAIPPSVFYLNPEDGK 427 Query: 560 RRLHY 574 + + Sbjct: 428 NLVRF 432 >11_04_0332 + 16465360-16465769,16465873-16466272,16466379-16466423, 16467113-16467139,16467201-16467266,16467889-16467950, 16468049-16468123,16468218-16468383,16468611-16468734, 16469737-16469843,16469992-16470102 Length = 530 Score = 28.7 bits (61), Expect = 4.0 Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 1/59 (1%) Frame = +2 Query: 374 AYILAEAGYDVWLGNARGTYYSRAHTKLDPDND-SEFWKFSWEEIGTRDLPAMIDYTLK 547 A +L E G +W GNA Y + D + F W G DYT K Sbjct: 315 AKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMHADYTGK 373 >01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476, 3085904-3085985,3086085-3086275,3086410-3086616, 3086709-3086871,3087905-3087960,3088035-3088148, 3088599-3089807 Length = 827 Score = 28.7 bits (61), Expect = 4.0 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 8/50 (16%) Frame = +1 Query: 40 LYLCYPGDCSPIPS--------CGLRRGTIQAGRSGFPLLYQCN*RCSSG 165 L LC+PG C P P+ CG R T + + +CN R G Sbjct: 214 LLLCHPGPCPPCPAIVPNAMCFCGSHRETRRCSHQRYSCSGKCNKRLGCG 263 >09_04_0713 - 19675437-19675551,19675872-19676017,19676226-19676259, 19676333-19676473,19676860-19676924,19677022-19677108, 19677186-19677254,19677457-19677548,19677781-19677853, 19678129-19678205,19678490-19678684,19678804-19678861, 19679423-19679517,19680071-19680191 Length = 455 Score = 27.9 bits (59), Expect = 6.9 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = +2 Query: 158 LLDIVGLITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLVMHG 322 LL V L TKYG + V+ G IL + H D+ P+P K + V+ G Sbjct: 117 LLTWVFLKTKYGLRKFIGVVICVAGIILVVFSDVHASDRAKGPNPLKGDLFVIAG 171 >06_01_0390 + 2802334-2802339,2802461-2802618,2802755-2802826, 2802967-2803114,2803234-2803503,2803741-2803904, 2804184-2804236,2804302-2804496,2804597-2804694, 2804787-2804891 Length = 422 Score = 27.9 bits (59), Expect = 6.9 Identities = 22/105 (20%), Positives = 50/105 (47%), Gaps = 9/105 (8%) Frame = +2 Query: 305 VLVMHGLFASAADW----VLMGPGLGLAYILAEAGYDVWLGNARGTYYSRAHT--KLDPD 466 ++++HG+ AS +DW ++ LG + + + + N ++ + T + Sbjct: 46 LILVHGIIASPSDWTYGEAVLKKRLGDNFFIYGSYIGLHFANENNSFLAIKLTVNYIIAA 105 Query: 467 NDSEFWKFSWEEI---GTRDLPAMIDYTLKVAGKRRLHYIGHSQG 592 + S + +++ I G R ++D K+AG R++ ++ HS G Sbjct: 106 SSSNIYTKTFDGIDVAGRRLANEVLDVIQKMAGLRKISFLAHSLG 150 >01_06_0343 + 28566513-28566644,28566791-28568494,28569178-28569240, 28569241-28569310,28570438-28570715,28571886-28571963, 28573017-28573715,28573811-28573913,28574096-28574196, 28574272-28574446,28574843-28575013,28575534-28575634, 28575706-28575771 Length = 1246 Score = 27.5 bits (58), Expect = 9.2 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Frame = +2 Query: 293 RKPAVLVMHGLFASAADWVLMGPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLD-PDN 469 R ++++ G+ +A + L PG A ++ G+D W+ RG S ++L D Sbjct: 753 RNHPLMLLSGVATNAIGFDL-SPGASFARHMSMQGFDTWIVEVRGAGLSMRGSELAVADT 811 Query: 470 DSEFWKFS-WEEIGTRDL 520 S+ + S +EI T+ L Sbjct: 812 TSDMSRSSALDEITTQKL 829 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,073,590 Number of Sequences: 37544 Number of extensions: 400444 Number of successful extensions: 1083 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1034 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1074 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1513903616 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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