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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b14f
         (625 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1358 - 26372559-26372887,26373183-26373262,26373287-263734...   135   3e-32
04_03_0156 - 11963580-11963914,11964422-11964517,11964618-119646...    98   4e-21
09_01_0014 + 357398-357583,360213-360323,360520-360676,361067-36...    93   2e-19
06_03_0852 - 25371461-25371783,25372080-25372159,25372472-253725...    64   9e-11
01_05_0146 + 18591235-18591345,18591662-18591830,18592282-185923...    48   6e-06
01_05_0145 + 18588201-18588242,18588925-18589044,18589201-185894...    41   7e-04
09_04_0366 + 16970063-16970254,16970697-16970720,16972440-16973591     33   0.24 
11_04_0332 + 16465360-16465769,16465873-16466272,16466379-164664...    29   4.0  
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308...    29   4.0  
09_04_0713 - 19675437-19675551,19675872-19676017,19676226-196762...    28   6.9  
06_01_0390 + 2802334-2802339,2802461-2802618,2802755-2802826,280...    28   6.9  
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692...    27   9.2  

>08_02_1358 -
           26372559-26372887,26373183-26373262,26373287-26373420,
           26373546-26373689,26373809-26373919,26374165-26374305,
           26376839-26376964,26377072-26377263
          Length = 418

 Score =  135 bits (326), Expect = 3e-32
 Identities = 64/145 (44%), Positives = 88/145 (60%), Gaps = 4/145 (2%)
 Frame = +2

Query: 179 ITKYGYPVEVHKVVTEDGYILEMQRIPHGR----DQNNRPDPRKPAVLVMHGLFASAADW 346
           +  +GYP E H+V T+DGYIL +QRIP GR            R+P VL+ HG+      W
Sbjct: 53  VAPFGYPCEEHEVTTQDGYILGLQRIPRGRIGGVTGGGAAAARQP-VLLQHGVLVDGMTW 111

Query: 347 VLMGPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWKFSWEEIGTRDLPA 526
           +L  P   L YILA+ G+DVW+ N RGT +S  H  LDP + S +W +SW++I   D+PA
Sbjct: 112 LLGSPEESLPYILADQGFDVWIANNRGTRWSSRHVSLDPKSRS-YWNWSWDDIVVNDMPA 170

Query: 527 MIDYTLKVAGKRRLHYIGHSQGTTV 601
           ++DY     G++  HY+GHS GT V
Sbjct: 171 IVDYVCSHTGQKP-HYVGHSMGTLV 194


>04_03_0156 -
           11963580-11963914,11964422-11964517,11964618-11964697,
           11965250-11965290,11965402-11965548,11965922-11966035,
           11968842-11968961,11969491-11969631,11969892-11970014,
           11970357-11970566
          Length = 468

 Score = 98.3 bits (234), Expect = 4e-21
 Identities = 46/95 (48%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
 Frame = +2

Query: 179 ITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQN--NRPDPRKPAVLVMHGLFASAADWVL 352
           +  +GY  E H V TEDGYIL +QRIP GR +         K  VL+ HGL      W++
Sbjct: 59  VAPFGYACEEHTVTTEDGYILSLQRIPSGRGETAAGGGGGGKVPVLLQHGLMMDGVTWLM 118

Query: 353 MGPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKL 457
             P   L YILA+ GYDVW+ N+RGT YSR HT L
Sbjct: 119 NSPNESLGYILADNGYDVWIANSRGTVYSRHHTSL 153



 Score = 54.8 bits (126), Expect = 5e-08
 Identities = 17/41 (41%), Positives = 31/41 (75%)
 Frame = +2

Query: 479 FWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGTTV 601
           +W +SW+E+ ++DL A++ Y    AG++++HY+GHS GT +
Sbjct: 200 YWNWSWDELSSKDLSAVVQYVYSQAGQQKMHYVGHSLGTLI 240


>09_01_0014 +
           357398-357583,360213-360323,360520-360676,361067-361233,
           362012-362122,362206-362349,362436-362476,364134-364174,
           364175-364261,365402-365724
          Length = 455

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 44/115 (38%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
 Frame = +2

Query: 176 LITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLVMHGLFASAADWVLM 355
           L+   GYP   H V T+DG++L +Q IPHG+  N   D   P V + HGLF     W + 
Sbjct: 50  LLLPLGYPCTEHNVETKDGFLLSLQHIPHGK--NKAADSTGPPVFLQHGLFQGGDTWFIN 107

Query: 356 GPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDN--DSEFWKFSWEEIGTR 514
                L YILA+ G+DVW+GN RGT +S+ H+     +  ++  W   W  +G R
Sbjct: 108 SAEQSLGYILADNGFDVWIGNVRGTRWSKGHSTFSVHDKVNTLHWN-EWRALGLR 161



 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = +2

Query: 479 FWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGT 595
           FW +SW+E+   DL AM+ Y   V  + ++ Y+GHSQGT
Sbjct: 209 FWDWSWQELAEYDLLAMLGYVYTVT-QSKILYVGHSQGT 246


>06_03_0852 -
           25371461-25371783,25372080-25372159,25372472-25372554,
           25372597-25372740,25372836-25372946,25373238-25373354,
           25373436-25373562,25374160-25374296
          Length = 373

 Score = 64.1 bits (149), Expect = 9e-11
 Identities = 26/53 (49%), Positives = 35/53 (66%)
 Frame = +2

Query: 188 YGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLVMHGLFASAADW 346
           +GYP E +KV TEDGYIL ++RIPHG   +N     +P VL+ HGL  +  +W
Sbjct: 80  FGYPCEEYKVTTEDGYILSLKRIPHGPHDSNTSTEMRPPVLLFHGLMVAYWEW 132



 Score = 48.0 bits (109), Expect = 6e-06
 Identities = 18/44 (40%), Positives = 31/44 (70%)
 Frame = +2

Query: 479 FWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGTTVFWA 610
           +W++SW+E+ + DLPA++ +     G+ ++HYIGHS GT +  A
Sbjct: 129 YWEWSWDELASYDLPAVLQFAYDHTGE-KIHYIGHSLGTLMILA 171


>01_05_0146 +
           18591235-18591345,18591662-18591830,18592282-18592334,
           18592369-18592487,18592618-18593698
          Length = 510

 Score = 48.0 bits (109), Expect = 6e-06
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
 Frame = +2

Query: 392 AGYDVWLGNARGTYYSRAHTKLDPDNDS-EFWKFSWEEIGTRDLPAMIDYTLKV----AG 556
           AGYDV+LGN RG   SR H  +D +  S ++WK+S  E GT+D+PA+++   K+     G
Sbjct: 125 AGYDVFLGNLRGLV-SREH--VDKNISSYKYWKYSVNEHGTKDMPAIVEEIHKIKTSELG 181

Query: 557 KRRLH 571
           K R H
Sbjct: 182 KSRPH 186


>01_05_0145 +
           18588201-18588242,18588925-18589044,18589201-18589457,
           18589980-18590048,18590091-18590115
          Length = 170

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +2

Query: 176 LITKYGYPVEVHKVVTEDGYILEMQRIP 259
           +IT+ GYP E  KVVT DGY+L ++RIP
Sbjct: 135 VITELGYPFEAIKVVTSDGYVLLLERIP 162


>09_04_0366 + 16970063-16970254,16970697-16970720,16972440-16973591
          Length = 455

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 383 LAEAGYDVWLGNARGTYYSRA-HTKLDPDNDSEFWKFSWEEIGTRDLPAMIDYTLKVAGK 559
           L +AG+ V+  +  GTY+    HT    DND EF ++   E+G   +P  + Y     GK
Sbjct: 370 LKDAGFIVYPSS--GTYFVMVDHTPFGFDNDIEFCEYLIREVGVVAIPPSVFYLNPEDGK 427

Query: 560 RRLHY 574
             + +
Sbjct: 428 NLVRF 432


>11_04_0332 +
           16465360-16465769,16465873-16466272,16466379-16466423,
           16467113-16467139,16467201-16467266,16467889-16467950,
           16468049-16468123,16468218-16468383,16468611-16468734,
           16469737-16469843,16469992-16470102
          Length = 530

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
 Frame = +2

Query: 374 AYILAEAGYDVWLGNARGTYYSRAHTKLDPDND-SEFWKFSWEEIGTRDLPAMIDYTLK 547
           A +L E G  +W GNA   Y          + D    + F W   G        DYT K
Sbjct: 315 AKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMHADYTGK 373


>01_01_0409 -
           3084821-3084988,3085069-3085155,3085270-3085476,
           3085904-3085985,3086085-3086275,3086410-3086616,
           3086709-3086871,3087905-3087960,3088035-3088148,
           3088599-3089807
          Length = 827

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 8/50 (16%)
 Frame = +1

Query: 40  LYLCYPGDCSPIPS--------CGLRRGTIQAGRSGFPLLYQCN*RCSSG 165
           L LC+PG C P P+        CG  R T +     +    +CN R   G
Sbjct: 214 LLLCHPGPCPPCPAIVPNAMCFCGSHRETRRCSHQRYSCSGKCNKRLGCG 263


>09_04_0713 -
           19675437-19675551,19675872-19676017,19676226-19676259,
           19676333-19676473,19676860-19676924,19677022-19677108,
           19677186-19677254,19677457-19677548,19677781-19677853,
           19678129-19678205,19678490-19678684,19678804-19678861,
           19679423-19679517,19680071-19680191
          Length = 455

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +2

Query: 158 LLDIVGLITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLVMHG 322
           LL  V L TKYG    +  V+   G IL +    H  D+   P+P K  + V+ G
Sbjct: 117 LLTWVFLKTKYGLRKFIGVVICVAGIILVVFSDVHASDRAKGPNPLKGDLFVIAG 171


>06_01_0390 +
           2802334-2802339,2802461-2802618,2802755-2802826,
           2802967-2803114,2803234-2803503,2803741-2803904,
           2804184-2804236,2804302-2804496,2804597-2804694,
           2804787-2804891
          Length = 422

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 22/105 (20%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
 Frame = +2

Query: 305 VLVMHGLFASAADW----VLMGPGLGLAYILAEAGYDVWLGNARGTYYSRAHT--KLDPD 466
           ++++HG+ AS +DW     ++   LG  + +  +   +   N   ++ +   T   +   
Sbjct: 46  LILVHGIIASPSDWTYGEAVLKKRLGDNFFIYGSYIGLHFANENNSFLAIKLTVNYIIAA 105

Query: 467 NDSEFWKFSWEEI---GTRDLPAMIDYTLKVAGKRRLHYIGHSQG 592
           + S  +  +++ I   G R    ++D   K+AG R++ ++ HS G
Sbjct: 106 SSSNIYTKTFDGIDVAGRRLANEVLDVIQKMAGLRKISFLAHSLG 150


>01_06_0343 +
           28566513-28566644,28566791-28568494,28569178-28569240,
           28569241-28569310,28570438-28570715,28571886-28571963,
           28573017-28573715,28573811-28573913,28574096-28574196,
           28574272-28574446,28574843-28575013,28575534-28575634,
           28575706-28575771
          Length = 1246

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
 Frame = +2

Query: 293 RKPAVLVMHGLFASAADWVLMGPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLD-PDN 469
           R   ++++ G+  +A  + L  PG   A  ++  G+D W+   RG   S   ++L   D 
Sbjct: 753 RNHPLMLLSGVATNAIGFDL-SPGASFARHMSMQGFDTWIVEVRGAGLSMRGSELAVADT 811

Query: 470 DSEFWKFS-WEEIGTRDL 520
            S+  + S  +EI T+ L
Sbjct: 812 TSDMSRSSALDEITTQKL 829


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,073,590
Number of Sequences: 37544
Number of extensions: 400444
Number of successful extensions: 1083
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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