Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b14f
         (625 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)       160   7e-40
SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)             149   1e-36
SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06)       118   5e-27
SB_25531| Best HMM Match : No HMM Matches (HMM E-Value=.)              45   4e-05
SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2)               37   0.012
SB_7173| Best HMM Match : dDENN (HMM E-Value=1.5e-08)                  35   0.062
SB_44624| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.00027)         31   0.76 
SB_33099| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.76 
SB_37380| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=5.2)             30   1.3  
SB_45912| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0)              29   4.1  
SB_17386| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.4  
SB_28305| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0054)               28   7.1  
SB_13199| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_49754| Best HMM Match : DUF1281 (HMM E-Value=5.9)                   27   9.4  
SB_18547| Best HMM Match : Vicilin_N (HMM E-Value=1.6)                 27   9.4  

>SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)
          Length = 991

 Score =  160 bits (389), Expect = 7e-40
 Identities = 71/142 (50%), Positives = 93/142 (65%)
 Frame = +2

Query: 176 LITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLVMHGLFASAADWVLM 355
           LI   GYPVE H V T DG+IL +QRIPHGR++      RKP V + HGL   + +WVL 
Sbjct: 111 LIRNRGYPVEEHYVTTSDGFILNLQRIPHGRNELREGSGRKPVVFLQHGLLMDSTNWVLN 170

Query: 356 GPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWKFSWEEIGTRDLPAMID 535
            P   L YILA+ G+DVWLGN RG  YS AH K + D+ S+FW ++W+++   DLPAMID
Sbjct: 171 SPHDSLGYILADKGFDVWLGNIRGNEYSAAHVKWNKDS-SKFWDWTWQQMAQYDLPAMID 229

Query: 536 YTLKVAGKRRLHYIGHSQGTTV 601
           Y      + ++ Y+GHSQGT +
Sbjct: 230 YVTLATSQSQVFYVGHSQGTLI 251


>SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 668

 Score =  149 bits (362), Expect = 1e-36
 Identities = 70/147 (47%), Positives = 93/147 (63%)
 Frame = +2

Query: 161 LDIVGLITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLVMHGLFASAA 340
           +++  LI   GYPVE + V TEDGYIL +QRIP+GR+   +    KP V + HGL  SA 
Sbjct: 296 MNVTQLIQYNGYPVEDYDVTTEDGYILSVQRIPYGREGKCKGVKDKPVVFLQHGLLCSAT 355

Query: 341 DWVLMGPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWKFSWEEIGTRDL 520
           +WV         +ILA+  +DVWLGN RG  Y + H KL  D+D+ FW FS++E+   DL
Sbjct: 356 NWVTNLYNESFGFILADQCFDVWLGNVRGNTYGKRHVKLPVDSDA-FWDFSFDEMAKYDL 414

Query: 521 PAMIDYTLKVAGKRRLHYIGHSQGTTV 601
           PAMID+  K  G+  L+Y GHSQGT +
Sbjct: 415 PAMIDFVTKTTGQASLYYAGHSQGTMI 441


>SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06)
          Length = 226

 Score =  118 bits (283), Expect = 5e-27
 Identities = 55/118 (46%), Positives = 72/118 (61%)
 Frame = +2

Query: 248 QRIPHGRDQNNRPDPRKPAVLVMHGLFASAADWVLMGPGLGLAYILAEAGYDVWLGNARG 427
           QRIP+GR    +    KP V + HGL  SA +WV         +ILA+  +DVWLGN RG
Sbjct: 2   QRIPYGRKGKCKGVKDKPVVFLQHGLLCSATNWVTNLYNESFGFILADQCFDVWLGNVRG 61

Query: 428 TYYSRAHTKLDPDNDSEFWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGTTV 601
             Y + H KL  D+D+ FW FS++E+   DLPAMID+  K  G+  L+Y GHSQGT +
Sbjct: 62  NTYGKRHVKLPVDSDA-FWDFSFDEMAKYDLPAMIDFVTKTTGQASLYYAGHSQGTMI 118


>SB_25531| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 145

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = +2

Query: 494 WEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGTTV 601
           ++E+   DLPAMID+  K  G+  L+Y GHSQGT +
Sbjct: 2   FDEMAKYDLPAMIDFVTKTTGQASLYYAGHSQGTMI 37


>SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2)
          Length = 265

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +2

Query: 527 MIDYTLKVAGKRRLHYIGHSQGT 595
           MIDY L+  G+ +L YIGHSQGT
Sbjct: 1   MIDYVLQTTGQSQLFYIGHSQGT 23


>SB_7173| Best HMM Match : dDENN (HMM E-Value=1.5e-08)
          Length = 416

 Score = 34.7 bits (76), Expect = 0.062
 Identities = 13/31 (41%), Positives = 23/31 (74%)
 Frame = -2

Query: 390 SAKMYAKPRPGPIRTQSAAEAKSPCITKTAG 298
           S K+  +PRPGP+R +S++ ++SP ++ T G
Sbjct: 187 SEKLKPQPRPGPLRKRSSSSSRSPVLSVTDG 217


>SB_44624| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.00027)
          Length = 299

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 284 PDPRKPAVLVMHGLFASAADW 346
           PDP  P + +MHGLF +  +W
Sbjct: 64  PDPPDPPLFIMHGLFGNKKNW 84


>SB_33099| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 698

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 149 EDALLDIVGLITKYGYPVEVHKVVTEDG 232
           ED+L D + L+ KYG+P  V+ + T+ G
Sbjct: 164 EDSLSDAIDLLRKYGFPTNVYPLGTKRG 191


>SB_37380| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=5.2)
          Length = 322

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 149 EDALLDIVGLITKYGYPVEVHKV 217
           ED+L D + L+ KYG+P  V+++
Sbjct: 124 EDSLSDAIDLLRKYGFPTNVYRI 146


>SB_45912| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 187

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 395 QLQPKCMLSQDLDPSEPSQQQKQKVHA 315
           QLQ + ++SQ    S P QQQ+Q +HA
Sbjct: 87  QLQQQLLMSQQSKYSHPLQQQQQHLHA 113


>SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0)
          Length = 1788

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 4/102 (3%)
 Frame = +2

Query: 191  GYPVE-VHKVVTEDGYIL---EMQRIPHGRDQNNRPDPRKPAVLVMHGLFASAADWVLMG 358
            GY VE V  +   DG  L   E   + HG    NR   R   V+     + +  +W   G
Sbjct: 1349 GYFVERVANITVNDGLSLAGWEDGLLGHGEVPYNRKSFRNSNVMAY--AWNNIWEW---G 1403

Query: 359  PGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFW 484
             G   AY+LA AGY V +  A   Y+   + + DP     +W
Sbjct: 1404 SGKR-AYLLANAGYKVVMTQATHLYFDFPY-EPDPQERGYYW 1443


>SB_17386| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 219

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 152 DALLDIVGLITKYGYPVEVHKVVTEDGYILEMQRIPHGRD 271
           D+  D + ++ KYG+P  V+++    G +L       GRD
Sbjct: 159 DSASDAIDIVRKYGFPTNVYRIAYVMGRLLSEVLQLTGRD 198


>SB_28305| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0054)
          Length = 425

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 33  CFSVSVLPRRLFADPLMRITSRNYTGWTLRVP 128
           C SV  LP  +F DP ++  +R    W  +VP
Sbjct: 268 CASVGNLPCNIFNDPTLQDLARKVNQWIPQVP 299


>SB_13199| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 259

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 188 YGYPVEVHKVVTEDGYILEMQRIPHGR 268
           Y Y  E H V+   G   E + IPHGR
Sbjct: 224 YDYTNETHNVLDRLGLCTENREIPHGR 250


>SB_49754| Best HMM Match : DUF1281 (HMM E-Value=5.9)
          Length = 338

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 164 DIVGLITKYGYPVEVHKV 217
           D + L+ KYG+P  VH++
Sbjct: 18  DAIDLVRKYGFPTNVHRI 35


>SB_18547| Best HMM Match : Vicilin_N (HMM E-Value=1.6)
          Length = 203

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +2

Query: 56  QATVRRSPHADYVEELYRLDAQGSRYSTNVTEDALLDIVGLITKYGYPVEVHKVVTED 229
           ++  RR P AD    +YR +++     +    D++ DIVG I  Y    E +   T+D
Sbjct: 8   RSVYRREPEADVGSSVYRRESEAGVGGSVYRRDSVADIVGGI--YRRESEANVGATDD 63


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,926,507
Number of Sequences: 59808
Number of extensions: 471397
Number of successful extensions: 1063
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)