SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b14f
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70780-7|CAA94824.1|  411|Caenorhabditis elegans Hypothetical pr...   174   4e-44
AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical ...   174   4e-44
AF022976-9|AAC69088.2|  404|Caenorhabditis elegans Hypothetical ...   161   5e-40
U64849-2|AAC48051.1|  411|Caenorhabditis elegans Hypothetical pr...   159   2e-39
Z79696-2|CAB01973.1|  405|Caenorhabditis elegans Hypothetical pr...   157   6e-39
AF067942-3|AAL11486.1|  351|Caenorhabditis elegans Hypothetical ...   153   1e-37
AF067942-2|AAG45574.1|  403|Caenorhabditis elegans Hypothetical ...   153   1e-37
AL117200-4|CAB60584.1|  401|Caenorhabditis elegans Hypothetical ...   136   1e-32
Z81055-8|CAB02896.2|  409|Caenorhabditis elegans Hypothetical pr...   122   3e-28
AC024200-10|AAF35999.1|  284|Caenorhabditis elegans Hypothetical...    36   0.024
AC024865-1|AAF60878.1|  157|Caenorhabditis elegans Hypothetical ...    30   1.2  
AL031635-4|CAA21043.2|  269|Caenorhabditis elegans Hypothetical ...    28   4.7  

>Z70780-7|CAA94824.1|  411|Caenorhabditis elegans Hypothetical
           protein F46B6.8 protein.
          Length = 411

 Score =  174 bits (424), Expect = 4e-44
 Identities = 73/144 (50%), Positives = 105/144 (72%)
 Frame = +2

Query: 176 LITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLVMHGLFASAADWVLM 355
           +I ++GY  EVH V TEDGYIL+MQRIP+G+     P+ ++P +L+ HGL A A+DWV  
Sbjct: 38  IIERWGYKAEVHTVTTEDGYILQMQRIPYGKTSVTWPNGKRPVILLQHGLLACASDWVDN 97

Query: 356 GPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWKFSWEEIGTRDLPAMID 535
            P    A++ A+AG+DVWLGN RGT Y R +TKLDP +++ FW+FSW+E+   D+PAM+D
Sbjct: 98  LPTQSAAFVFADAGFDVWLGNVRGTTYGRKNTKLDP-SETAFWQFSWDEMAQYDVPAMVD 156

Query: 536 YTLKVAGKRRLHYIGHSQGTTVFW 607
           + L + G+  L+Y+GHSQGT + +
Sbjct: 157 HVLAMTGQENLYYMGHSQGTLIMF 180


>AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical
           protein Y57E12B.3 protein.
          Length = 684

 Score =  174 bits (424), Expect = 4e-44
 Identities = 80/161 (49%), Positives = 108/161 (67%), Gaps = 4/161 (2%)
 Frame = +2

Query: 140 NVTED--ALLDIVGLITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPR--KPAV 307
           N+T D  AL+D+  +IT +GYPVE HKVVT DGYIL + RIPHG+++ ++   +  KP V
Sbjct: 266 NITIDPEALMDVPEIITHWGYPVETHKVVTVDGYILTLHRIPHGKNETSKSASKTPKPVV 325

Query: 308 LVMHGLFASAADWVLMGPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWK 487
            + HGL  +++ W+L  P     YI A+ GYDVWLGN RG  YS+ HT++    D  FWK
Sbjct: 326 FLQHGLLCTSSIWLLNLPRQSAGYIFADQGYDVWLGNMRGNTYSKEHTRM-TSADRRFWK 384

Query: 488 FSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGTTVFWA 610
           FSWEE+   DLPAMI+Y LK   ++ L+Y+GHSQG    +A
Sbjct: 385 FSWEEMARYDLPAMINYALKTTKRQNLYYVGHSQGALTMFA 425


>AF022976-9|AAC69088.2|  404|Caenorhabditis elegans Hypothetical
           protein R11G11.14 protein.
          Length = 404

 Score =  161 bits (390), Expect = 5e-40
 Identities = 70/144 (48%), Positives = 99/144 (68%), Gaps = 1/144 (0%)
 Frame = +2

Query: 176 LITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLVMHGLFASAADWVLM 355
           +I ++GYP  ++ V T+DGYILE+ RIPHG+     P+ ++P V + HGL  ++ DW + 
Sbjct: 33  IIERWGYPAMIYSVTTDDGYILELHRIPHGKTNVTWPNGKQPVVFMQHGLLCASTDWTMN 92

Query: 356 GPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWKFSWEEIGTRDLPAMID 535
            P    A+I A+AG+DVWLGN RG  YS  H  L   + S+FW++SW+E+ T DLPAMID
Sbjct: 93  LPEQSAAFIFADAGFDVWLGNMRGNTYSMKHKNLKASH-SDFWEWSWDEMATYDLPAMID 151

Query: 536 YTLKVAGKRRLHYIGHSQGT-TVF 604
             L+V G+  L+Y+GHSQGT T+F
Sbjct: 152 KVLEVTGQESLYYMGHSQGTLTMF 175


>U64849-2|AAC48051.1|  411|Caenorhabditis elegans Hypothetical
           protein K04A8.5 protein.
          Length = 411

 Score =  159 bits (385), Expect = 2e-39
 Identities = 71/164 (43%), Positives = 100/164 (60%), Gaps = 2/164 (1%)
 Frame = +2

Query: 125 SRYSTNVTEDALLDIVGLITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPR--K 298
           S YS +V  +  LD   LI  +GY VE++   T+DG+ILE+ RIP+GR+     D    +
Sbjct: 22  SNYSKSVDLEFYLDTPELIKSWGYSVEIYNTTTKDGFILELHRIPYGREVPTSSDVNNSR 81

Query: 299 PAVLVMHGLFASAADWVLMGPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSE 478
           P + + HG   S+ DWV   P     ++ A+AG+DVWLGN RG  YSR H  L+PD D +
Sbjct: 82  PVIFLQHGFLCSSFDWVANSPHQSAGFVFADAGFDVWLGNFRGNTYSRKHVSLNPDKDPK 141

Query: 479 FWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGTTVFWA 610
           FW +SW++I   DLPAMI   L+++G+  L+Y G S GT   +A
Sbjct: 142 FWDWSWDQISEYDLPAMIGKALEISGQESLYYTGFSLGTLTMFA 185


>Z79696-2|CAB01973.1|  405|Caenorhabditis elegans Hypothetical
           protein F54F3.3 protein.
          Length = 405

 Score =  157 bits (381), Expect = 6e-39
 Identities = 72/144 (50%), Positives = 99/144 (68%), Gaps = 1/144 (0%)
 Frame = +2

Query: 176 LITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLVMHGLFASAADWVLM 355
           +I ++GYP  ++ V TEDGYILE+ RIP+G+     P+ +KP V + HGL  S+++WV+ 
Sbjct: 34  IIMRWGYPAMIYDVTTEDGYILELHRIPYGKTNVTWPNGKKPVVFMQHGLECSSSNWVVN 93

Query: 356 GPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWKFSWEEIGTRDLPAMID 535
            P    A++ A+AGYDVWLGN RG  YS  H  L P + S FW +SW+E+   DLPAMI+
Sbjct: 94  LPTESAAFLFADAGYDVWLGNFRGNTYSMKHKNLKPSH-SAFWDWSWDEMQQYDLPAMIE 152

Query: 536 YTLKVAGKRRLHYIGHSQGT-TVF 604
             L+V G+  L+YIGHSQGT T+F
Sbjct: 153 KALEVTGQDSLYYIGHSQGTLTMF 176


>AF067942-3|AAL11486.1|  351|Caenorhabditis elegans Hypothetical
           protein ZK6.7b protein.
          Length = 351

 Score =  153 bits (370), Expect = 1e-37
 Identities = 67/144 (46%), Positives = 98/144 (68%), Gaps = 1/144 (0%)
 Frame = +2

Query: 176 LITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLVMHGLFASAADWVLM 355
           +I ++GYP  ++ V T+DGYILEM RIP G+     P+ ++P V + HGL  +++DWV+ 
Sbjct: 32  IIERWGYPAMIYTVATDDGYILEMHRIPFGKTNVTWPNGKRPVVFMQHGLLCASSDWVVN 91

Query: 356 GPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWKFSWEEIGTRDLPAMID 535
            P     ++ A+AG+DVWLGN RG  YS  H  L P + S FW +SW+E+ T DL AMI+
Sbjct: 92  LPDQSAGFLFADAGFDVWLGNMRGNTYSMKHKDLKPSH-SAFWDWSWDEMATYDLNAMIN 150

Query: 536 YTLKVAGKRRLHYIGHSQGT-TVF 604
           + L+V G+  ++Y+GHSQGT T+F
Sbjct: 151 HVLEVTGQDSVYYMGHSQGTLTMF 174


>AF067942-2|AAG45574.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK6.7a protein.
          Length = 403

 Score =  153 bits (370), Expect = 1e-37
 Identities = 67/144 (46%), Positives = 98/144 (68%), Gaps = 1/144 (0%)
 Frame = +2

Query: 176 LITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLVMHGLFASAADWVLM 355
           +I ++GYP  ++ V T+DGYILEM RIP G+     P+ ++P V + HGL  +++DWV+ 
Sbjct: 32  IIERWGYPAMIYTVATDDGYILEMHRIPFGKTNVTWPNGKRPVVFMQHGLLCASSDWVVN 91

Query: 356 GPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWKFSWEEIGTRDLPAMID 535
            P     ++ A+AG+DVWLGN RG  YS  H  L P + S FW +SW+E+ T DL AMI+
Sbjct: 92  LPDQSAGFLFADAGFDVWLGNMRGNTYSMKHKDLKPSH-SAFWDWSWDEMATYDLNAMIN 150

Query: 536 YTLKVAGKRRLHYIGHSQGT-TVF 604
           + L+V G+  ++Y+GHSQGT T+F
Sbjct: 151 HVLEVTGQDSVYYMGHSQGTLTMF 174


>AL117200-4|CAB60584.1|  401|Caenorhabditis elegans Hypothetical
           protein Y50E8A.7 protein.
          Length = 401

 Score =  136 bits (329), Expect = 1e-32
 Identities = 70/151 (46%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
 Frame = +2

Query: 161 LDIVGLITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPD-PRKPAVLVMHGLFASA 337
           LD    I+ YGY VE H V T+DGY +++QRIP GRD  +     ++P V  MHGLF S+
Sbjct: 23  LDAADTISHYGYTVEKHYVTTDDGYTVQLQRIPVGRDDRSILGCSKRPVVFFMHGLFGSS 82

Query: 338 ADWVLMGPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWKFSWEEIGTRD 517
             ++L  P    AYI A+AG+DVWLGN RGT Y   HT     N   FW FS  E    D
Sbjct: 83  YHFLLNLPSQSAAYIFADAGFDVWLGNIRGTEYGLNHTSFS-TNGVNFWNFSLYEHSHYD 141

Query: 518 LPAMIDYTLKVAGKRRLHYIGHSQGTTVFWA 610
           L   I+Y L       L Y+GHSQGT V +A
Sbjct: 142 LRQQIEYVLDYTRHESLFYVGHSQGTAVMFA 172


>Z81055-8|CAB02896.2|  409|Caenorhabditis elegans Hypothetical
           protein F01G10.7 protein.
          Length = 409

 Score =  122 bits (293), Expect = 3e-28
 Identities = 54/159 (33%), Positives = 90/159 (56%)
 Frame = +2

Query: 134 STNVTEDALLDIVGLITKYGYPVEVHKVVTEDGYILEMQRIPHGRDQNNRPDPRKPAVLV 313
           S  + ++  + +  +   +GY  EVH V T D YILE+ RIP  +++      ++P V +
Sbjct: 18  SLAIDDECYMTVPEIGKHFGYESEVHLVRTTDEYILELHRIPCKQNEKCDRSSKRPIVFM 77

Query: 314 MHGLFASAADWVLMGPGLGLAYILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWKFS 493
            HGL A    W+         ++ A+AG+D+W+ N+RGT  S+ H    P+N  +FW F+
Sbjct: 78  QHGLLADGFSWIPNLANQSAGFVFADAGFDIWIANSRGTPASQKHIGYGPEN-QKFWNFT 136

Query: 494 WEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGTTVFWA 610
           W+++   DL A +D  LK   +  L+Y+GHSQGT + ++
Sbjct: 137 WQQMSEFDLTASVDLVLKETKQEFLYYLGHSQGTMIMFS 175


>AC024200-10|AAF35999.1|  284|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.7 protein.
          Length = 284

 Score = 35.9 bits (79), Expect = 0.024
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +2

Query: 377 YILAEAGYDVWLGNARGTYYSRAHTKLDPDNDSEFWKFSWEEIGTR 514
           Y+  EA  D ++  ARG +  RA+ +LDP+ +  FW   W EI  +
Sbjct: 174 YLEMEAAVD-YIERARGVF--RANKELDPNREGSFWTDDWNEIAEK 216



 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 416 NARGTYYSRAHTKLDPDNDSEFWKFSWEEI 505
           NA G Y  +A+ ++DP   S FW   W EI
Sbjct: 53  NAMGVY--QANLEVDPTGTSTFWTEEWNEI 80


>AC024865-1|AAF60878.1|  157|Caenorhabditis elegans Hypothetical
           protein Y74C10AL.2 protein.
          Length = 157

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
 Frame = +1

Query: 343 LGSDGSRSWLSIHFG*SWL*CVAWKRTW-----YILLQSSH*IRPG 465
           LG+ GSR WL   F  S+   VA   TW     Y+L+Q SH + PG
Sbjct: 87  LGTKGSRLWLMAAFVVSFASLVA--ATWILFSDYVLIQGSHSVWPG 130


>AL031635-4|CAA21043.2|  269|Caenorhabditis elegans Hypothetical
           protein Y47D3B.6 protein.
          Length = 269

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -2

Query: 432 YVPRAFPSHTS*PASAKMYAKPRPGPIRTQSAAEAKSPCI 313
           Y P   P++   P  A ++A P P P+     A   +P I
Sbjct: 64  YAPAPLPAYAPAPLPAPVFAAPAPAPVFAAPFAAPPAPVI 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,409,658
Number of Sequences: 27780
Number of extensions: 339039
Number of successful extensions: 942
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -