Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b14f
         (625 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    23   2.4  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    23   2.4  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   4.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   4.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.4  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.8  

>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 528 IAGRSRVPISSQLNFQNSESLSGSNL 451
           + G S V + SQ+N   S  +SG+N+
Sbjct: 30  VKGESNVDVVSQINSLVSSIVSGANV 55


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 528 IAGRSRVPISSQLNFQNSESLSGSNL 451
           + G S V + SQ+N   S  +SG+N+
Sbjct: 30  VKGESNVDVVSQINSLVSSIVSGANV 55


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
          isomerase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 7  TNNEVVVRIVSLYLCYPGDCSP 72
          +N EVVV + S+YL Y  +  P
Sbjct: 34 SNVEVVVGVPSIYLTYAKNILP 55


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 322 SMHNQNSWFPRVGSVVLVTSMRN 254
           SM N+NS F R+G  V   +  N
Sbjct: 197 SMTNENSEFRRMGREVFAVNFMN 219


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 371  SQDLDPSEPSQQQKQKVHA*PKQ 303
            SQ     +P QQQ+Q+    P+Q
Sbjct: 1497 SQKTQQQQPQQQQQQQQQQQPQQ 1519


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 5   LLTMKWLLGLFLC 43
           LL  KW+ G+ LC
Sbjct: 97  LLLGKWIFGIHLC 109


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 5   LLTMKWLLGLFLC 43
           LL  KW+ G+ LC
Sbjct: 97  LLLGKWIFGIHLC 109


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 5   LLTMKWLLGLFLC 43
           LL  KW+ G+ LC
Sbjct: 97  LLLGKWIFGIHLC 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,195
Number of Sequences: 438
Number of extensions: 4476
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)