Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b12r
(672 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 27 0.21
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 26 0.28
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 26 0.28
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.5
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 4.6
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 4.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 4.6
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 6.1
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 6.1
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 6.1
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 6.1
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 6.1
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 6.1
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 6.1
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 6.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 6.1
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 8.1
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 8.1
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 8.1
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 26.6 bits (56), Expect = 0.21
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 319 SLGNNYRARYYDGRISNDHGRNSRLFFNI 405
SL NNY Y+ +N + N +L++NI
Sbjct: 84 SLSNNYNYSNYNNYNNNYNNYNKKLYYNI 112
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 26.2 bits (55), Expect = 0.28
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 259 VHWARGHNGGVSHDHRGYT 315
+HW GHNGG S GYT
Sbjct: 1422 LHWKSGHNGGAS--LTGYT 1438
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 26.2 bits (55), Expect = 0.28
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 259 VHWARGHNGGVSHDHRGYT 315
+HW GHNGG S GYT
Sbjct: 1418 LHWKSGHNGGAS--LTGYT 1434
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +1
Query: 277 HNGGVSHDHRGYTRSLGNNYRARYYD 354
+N ++++ Y + NNY+ YY+
Sbjct: 330 NNNNYNNNYNNYNNNNYNNYKKLYYN 355
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 582 GHYESPDVGPALVEAPIVPSPVHVGPLVP 496
G++ +GP + +P H+GPL P
Sbjct: 125 GNFPPRPMGPWISIQEQIPRFRHIGPLTP 153
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 295 HDHRGYTRSLGNNYRARYYD 354
H++ Y + NNY+ YY+
Sbjct: 91 HNNNNYNNNNYNNYKKLYYN 110
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 582 GHYESPDVGPALVEAPIVPSPVHVGPLVP 496
G++ +GP + +P H+GPL P
Sbjct: 366 GNFPPRPMGPWISIQEQIPRFRHIGPLTP 394
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 582 GHYESPDVGPALVEAPIVPSPVHVGPLVP 496
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 582 GHYESPDVGPALVEAPIVPSPVHVGPLVP 496
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 582 GHYESPDVGPALVEAPIVPSPVHVGPLVP 496
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 582 GHYESPDVGPALVEAPIVPSPVHVGPLVP 496
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 582 GHYESPDVGPALVEAPIVPSPVHVGPLVP 496
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 582 GHYESPDVGPALVEAPIVPSPVHVGPLVP 496
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 582 GHYESPDVGPALVEAPIVPSPVHVGPLVP 496
G++ S +GP + +P H+GP P
Sbjct: 130 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 158
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 582 GHYESPDVGPALVEAPIVPSPVHVGPLVP 496
G++ S +GP + +P H+GP P
Sbjct: 133 GNFPSRPMGPWVPMQEQIPRFRHIGPSTP 161
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 6.1
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = +1
Query: 295 HDHRGYTRSLGNNYRARYYD 354
+++ Y + NNY+ YY+
Sbjct: 335 NNYNNYNNNYNNNYKKLYYN 354
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.1
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 292 SHDHRGYTRSLGNNYRARYYD 354
++++ Y + NNYR YY+
Sbjct: 90 NYNNNNYKKLYCNNYRKLYYN 110
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 531 VPSPVHVGPLVPGQLTPLVHI 469
VP P+H G P + P + I
Sbjct: 346 VPVPIHCGNFPPRPMGPWISI 366
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 588 KRGHYESPDVG 556
KRG YE P VG
Sbjct: 610 KRGKYEEPTVG 620
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,680
Number of Sequences: 438
Number of extensions: 2176
Number of successful extensions: 26
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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