Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b11r
         (354 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    26   0.13 
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    24   0.40 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    24   0.40 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   1.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   2.8  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   3.7  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    21   3.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   4.9  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   4.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   6.5  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   8.6  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 25.8 bits (54), Expect = 0.13
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 202 RSCNNYWRCQ 173
           +SCN YW+CQ
Sbjct: 168 KSCNRYWQCQ 177



 Score = 19.8 bits (39), Expect = 8.6
 Identities = 5/8 (62%), Positives = 5/8 (62%)
 Frame = -3

Query: 199 SCNNYWRC 176
           SC  YW C
Sbjct: 111 SCTRYWTC 118


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 24.2 bits (50), Expect = 0.40
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 205 HRSCNNYWRC 176
           H SC+ YW+C
Sbjct: 35  HTSCDKYWKC 44


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 24.2 bits (50), Expect = 0.40
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 205 HRSCNNYWRC 176
           H SC+ YW+C
Sbjct: 35  HTSCDKYWKC 44


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 266 SRASPPEAKDLRTRLKMRISPSAEPTD 346
           S  S  E KD+ T L    SP+ +P D
Sbjct: 116 SPKSEKEEKDMETTLTPCASPNRKPDD 142


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 38  TSWATYSRTRLTSAA*SVR*TGIFSRKLLTAGPTSRP 148
           TS  TYS   + ++  SV  T  +   L   G TS+P
Sbjct: 91  TSNPTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQP 127


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 346 ISRFR*RRNPHFQPRPEVF 290
           IS F   R+P + P PE F
Sbjct: 378 ISMFAIHRDPQYFPDPEKF 396


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 346 ISRFR*RRNPHFQPRPEVF 290
           I +F   RNP + P P+ F
Sbjct: 90  IGQFLVHRNPKYFPNPDKF 108


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +2

Query: 239 EAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTD 346
           E V    + ++A  P ++DL T L  +     +P D
Sbjct: 398 EEVTQKPSSTKAPAPPSRDLTTTLCTKAGYVRDPDD 433


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -3

Query: 328 RRNPHFQPR 302
           RRNP+++PR
Sbjct: 228 RRNPYYRPR 236


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 328 RRNPHFQPRPEVFRFRRTCP 269
           RRN   +PRP + R   T P
Sbjct: 325 RRNEPKRPRPNIDRHEVTRP 344


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 292 RPQDAAENADFSFSG 336
           RPQ   E A F+F G
Sbjct: 565 RPQGGEELAQFNFCG 579


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,942
Number of Sequences: 336
Number of extensions: 1258
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)