Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b11r
(354 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13710| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.82
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.82
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29) 29 0.82
SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.3
SB_38556| Best HMM Match : RVP (HMM E-Value=1.4) 27 3.3
SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037) 27 3.3
SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.3
SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.3
SB_55123| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-09) 27 3.3
SB_43706| Best HMM Match : RVP (HMM E-Value=1.4) 27 3.3
SB_29739| Best HMM Match : Ank (HMM E-Value=8.7) 27 3.3
SB_22574| Best HMM Match : RVP (HMM E-Value=1.4) 27 3.3
SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014) 27 3.3
SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.3
SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8) 27 4.4
SB_7200| Best HMM Match : Tubulin-binding (HMM E-Value=5.1) 27 4.4
SB_25946| Best HMM Match : Pterin_bind (HMM E-Value=2) 27 5.8
SB_43634| Best HMM Match : Sushi (HMM E-Value=1.2e-16) 27 5.8
SB_38461| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=6.5) 27 5.8
SB_38348| Best HMM Match : Ank (HMM E-Value=8.7) 27 5.8
SB_39656| Best HMM Match : ATP_bind_3 (HMM E-Value=0.79) 26 7.7
SB_39376| Best HMM Match : Alpha-amylase_C (HMM E-Value=0.49) 26 7.7
SB_33238| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.7
SB_36862| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.7
SB_2516| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.7
SB_2502| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.7
>SB_13710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 819
Score = 29.5 bits (63), Expect = 0.82
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = -1
Query: 285 SGGLALENVVAEATASVSLADNIIVSDIGAAITIGDVKSNLQIN 154
SGG L A+A +VSL+D+ S A I++ D++ +LQ++
Sbjct: 665 SGGRTLVQAAADAALAVSLSDH--CSQPSAPISLYDLRDSLQVH 706
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 29.5 bits (63), Expect = 0.82
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +1
Query: 43 LGDVLQNTADLGCVVRQVDRDLL*EVVDGW-SNFASEEIDLEVRFDIANSYCSSDVTDND 219
L D+L+N + V D D+ ++ G S + E D+ + +S+ + TD D
Sbjct: 654 LADLLKNASARMDDVSSGDNDIPDDLTGGAVSQGSGGEDDI-----LVDSHTPKEFTDTD 708
Query: 220 V-VCEGDGSGSLSNDVLKGKSSGSERPQDAA 309
+ +G+GSGS N + G +GS +++A
Sbjct: 709 AKLLQGEGSGSQHNVMRGGSGAGSGNLKESA 739
>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
Length = 1544
Score = 29.5 bits (63), Expect = 0.82
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 202 DVTDNDVVCEGDGSGSLS-NDVLKGKSSGSERPQDAAENADFSFSGTD 342
DV+D D V +GD G+ + +DV G S G + +++ D S D
Sbjct: 166 DVSDGDDVSDGDVDGANNCDDVSNGASDGDDVSNGSSDGDDVSNGAND 213
Score = 27.1 bits (57), Expect = 4.4
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +1
Query: 46 GDVLQNTADLGCVVRQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTD-NDV 222
GD + N A G VV +D D +V DG S + D D+++S SSD D +D
Sbjct: 1328 GDDVSNGASDGDVVVTIDGD---DVSDG-----SSDGD-----DVSDS--SSDGDDVSDG 1372
Query: 223 VCEGDGSGSLSNDVLKGKSSGSERPQDAAENADFSF 330
+GD +DV KG SSG + A++ + S+
Sbjct: 1373 ASDGDDVSD-GDDVSKGASSGDDVSNGASDGDETSY 1407
>SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1505
Score = 27.5 bits (58), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = -1
Query: 354 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--NIIVSDIGA 196
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +I V
Sbjct: 344 VSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKNDIAVRPAKG 403
Query: 195 AITIGD 178
I +GD
Sbjct: 404 QIILGD 409
>SB_38556| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 230
Score = 27.5 bits (58), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = -1
Query: 354 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--NIIVSDIGA 196
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +I V
Sbjct: 100 VSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKNDIAVRPAKG 159
Query: 195 AITIGD 178
I +GD
Sbjct: 160 QIILGD 165
>SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037)
Length = 1283
Score = 27.5 bits (58), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = -1
Query: 354 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--NIIVSDIGA 196
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +I V
Sbjct: 356 VSQADGSSQLHVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKNDIAVRPAKG 415
Query: 195 AITIGD 178
I +GD
Sbjct: 416 QIILGD 421
>SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 27.5 bits (58), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = -1
Query: 354 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSL--ADNIIVSDIGA 196
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A ++I V
Sbjct: 21 VSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMETNDIAVRPAKG 80
Query: 195 AITIGD 178
I +GD
Sbjct: 81 QIILGD 86
>SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1586
Score = 27.5 bits (58), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = -1
Query: 354 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--NIIVSDIGA 196
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +I V
Sbjct: 402 VSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKNDIAVRPAKG 461
Query: 195 AITIGD 178
I +GD
Sbjct: 462 QIILGD 467
>SB_55123| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-09)
Length = 315
Score = 27.5 bits (58), Expect = 3.3
Identities = 31/94 (32%), Positives = 39/94 (41%)
Frame = -1
Query: 300 LRSFASGGLALENVVAEATASVSLADNIIVSDIGAAITIGDVKSNLQINLFGREVGPAVN 121
L S+ GLA+ N+V + A NII A T D L +L G ++ N
Sbjct: 43 LASYLIAGLAVSNLVLVVGEILQAAGNIIYGK-NAYNTPSDNGGTLNGSLLGADIRGTTN 101
Query: 120 NFLEKIPVYLTDYAAEVSRVLEYVAQLVINRLPV 19
LE I T Y A + VL V L RL V
Sbjct: 102 YRLE-IASDFTLYFAMATSVLT-VLVLATERLVV 133
>SB_43706| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 577
Score = 27.5 bits (58), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = -1
Query: 354 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--NIIVSDIGA 196
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +I V
Sbjct: 355 VSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKNDIAVRPAKG 414
Query: 195 AITIGD 178
I +GD
Sbjct: 415 QIILGD 420
>SB_29739| Best HMM Match : Ank (HMM E-Value=8.7)
Length = 242
Score = 27.5 bits (58), Expect = 3.3
Identities = 25/100 (25%), Positives = 40/100 (40%)
Frame = -1
Query: 348 ASVGSAEGEIRIFSRVLRSFASGGLALENVVAEATASVSLADNIIVSDIGAAITIGDVKS 169
AS+ + G + + + A GG A+ + A A + ++ D+G + +G +
Sbjct: 55 ASMAAKGGHVEVLKVMGEYCADGGEAMTEAMGAAAAEGQVGVVELLIDLGVDVDVGWATA 114
Query: 168 NLQINLFGREVGPAVNNFLEKIPVYLTDYAAEVSRVLEYV 49
N + NF E P Y A E SR LE V
Sbjct: 115 EAAYNGHVEVLKLLRENFWEFDPDYAITPAIE-SRNLEIV 153
>SB_22574| Best HMM Match : RVP (HMM E-Value=1.4)
Length = 382
Score = 27.5 bits (58), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = -1
Query: 354 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--NIIVSDIGA 196
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +I V
Sbjct: 252 VSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKNDIAVRPAKG 311
Query: 195 AITIGD 178
I +GD
Sbjct: 312 QIILGD 317
>SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014)
Length = 1212
Score = 27.5 bits (58), Expect = 3.3
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Frame = -1
Query: 354 VSASVGSAE----GEIRI-FSRVLRSFASGGLALENVVAEATASVSLAD--NIIVSDIGA 196
VS + GS++ GE R+ F+R +SF+ GL +EN+ E A + +I V
Sbjct: 365 VSQADGSSQLRVVGETRLSFTRADKSFSFEGLVVENLDVEVLAGTPFMEKNDIAVRPAKG 424
Query: 195 AITIGD 178
I +GD
Sbjct: 425 QIILGD 430
>SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 848
Score = 27.5 bits (58), Expect = 3.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 82 RSRGQPCSGVRRPTRHQQITCKLLE 8
++R Q SGVR+ TRH +T L++
Sbjct: 416 QARSQEGSGVRKKTRHSTVTSALIK 440
>SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8)
Length = 841
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 175 DIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENAD 321
D N +++ DND E DG S +D+ G+ S E ++ + +
Sbjct: 413 DYNNMAACANIFDNDSDDEDDGQASGESDLSFGEESSDEEELESGDEGE 461
>SB_7200| Best HMM Match : Tubulin-binding (HMM E-Value=5.1)
Length = 294
Score = 27.1 bits (57), Expect = 4.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 148 RTRSWTSRQQLPREDPCLPDGLRSRGQPCSGV 53
RT+SWT + +++P +P L C GV
Sbjct: 223 RTKSWTFKSSQAKDNPRVPGHLDQTKGNCGGV 254
>SB_25946| Best HMM Match : Pterin_bind (HMM E-Value=2)
Length = 303
Score = 26.6 bits (56), Expect = 5.8
Identities = 21/92 (22%), Positives = 36/92 (39%)
Frame = -1
Query: 348 ASVGSAEGEIRIFSRVLRSFASGGLALENVVAEATASVSLADNIIVSDIGAAITIGDVKS 169
AS+ + G + + + A GG A+ + A A + ++ D+GA + +G +
Sbjct: 55 ASMAAKGGHVEVLKVMGEYCADGGEAMTEAMGAAAAEGQVGVVELLIDLGADVDVGWATA 114
Query: 168 NLQINLFGREVGPAVNNFLEKIPVYLTDYAAE 73
N + NF E P Y A E
Sbjct: 115 EAAYNGHVEVLKLLRENFSEFDPDYAITPATE 146
>SB_43634| Best HMM Match : Sushi (HMM E-Value=1.2e-16)
Length = 986
Score = 26.6 bits (56), Expect = 5.8
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 163 EVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSG 285
++ F+ + +C++D D C GDG ++ KS G
Sbjct: 545 KIPFNSSLMFCANDGKDYKQTCRGDGGSPFISESYDRKSRG 585
>SB_38461| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=6.5)
Length = 207
Score = 26.6 bits (56), Expect = 5.8
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 351 SASVG-SAEGEIRIFSRVLRSFASGGLALENVVAEATASVSLADNIIVSDIGAA 193
+AS G + EIR+ + + GGLAL + AT L ++VS +G A
Sbjct: 21 TASFGHGGDKEIRVQYAEIVAAVLGGLALAWIADLATGRRGLGATVLVSGVGLA 74
>SB_38348| Best HMM Match : Ank (HMM E-Value=8.7)
Length = 188
Score = 26.6 bits (56), Expect = 5.8
Identities = 21/92 (22%), Positives = 36/92 (39%)
Frame = -1
Query: 348 ASVGSAEGEIRIFSRVLRSFASGGLALENVVAEATASVSLADNIIVSDIGAAITIGDVKS 169
AS+ + G + + + A GG A+ + A A + ++ D+GA + +G +
Sbjct: 55 ASMAAKGGHVEVLKVMGEYCADGGEAMTEAMGAAAAEGQVGVVELLIDLGADVDVGWATA 114
Query: 168 NLQINLFGREVGPAVNNFLEKIPVYLTDYAAE 73
N + NF E P Y A E
Sbjct: 115 EAAYNGHVEVLKLLRENFSEFDPDYAITPATE 146
>SB_39656| Best HMM Match : ATP_bind_3 (HMM E-Value=0.79)
Length = 492
Score = 26.2 bits (55), Expect = 7.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 175 DIANSYCSSDVTDNDVVCEGDGSGSLSNDV 264
+I+N C+S TDND E + SN++
Sbjct: 191 EISNETCNSTTTDNDCNSEANEDTRNSNEI 220
>SB_39376| Best HMM Match : Alpha-amylase_C (HMM E-Value=0.49)
Length = 679
Score = 26.2 bits (55), Expect = 7.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 175 DIANSYCSSDVTDNDVVCEGDGSGSLSNDV 264
+I+N C+S TDND E + SN++
Sbjct: 536 EISNETCNSTTTDNDCNSEANEDTRNSNEI 565
>SB_33238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 26.2 bits (55), Expect = 7.7
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +1
Query: 31 VDDELGDVLQNTADLGCVVRQVDRDLL*EVV--DGWSNFASEEIDLEVRFDIANSYCSSD 204
+DD+ DV+ D G V D D++ + V D S+ ++++ + D+ + +D
Sbjct: 272 IDDDDSDVI----DEGDVNDDDDSDVIDDDVNDDDDSDVIDDDVNDDDDSDVIDEGDVND 327
Query: 205 VTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENAD 321
D+DV+ EGD +DV+ E D ++ D
Sbjct: 328 DDDSDVIDEGDVIDDDDSDVIDEGDVIDEDEGDVIDDDD 366
>SB_36862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 624
Score = 26.2 bits (55), Expect = 7.7
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 148 EEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAE 312
E D + FD ++ C D D D GD SL + +++ S +DAA+
Sbjct: 423 ENDDSQEPFDADSTACPKDDDDLDESLSGDSLDSLETSAKQVEATQSPYFKDAAQ 477
>SB_2516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 850
Score = 26.2 bits (55), Expect = 7.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 166 VRFDIANSYCSSDVTDNDVVCEGDGSGSL 252
V D+ YC++ + + CE GSGSL
Sbjct: 11 VLLDVLVLYCAAGNNERFIRCENTGSGSL 39
>SB_2502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 26.2 bits (55), Expect = 7.7
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 148 EEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSND 261
E+ D + DI N Y D D+D +GDG G D
Sbjct: 14 EDEDNDEDNDIDNGYDDDDKDDDDNDDDGDGDGDGDGD 51
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,498,172
Number of Sequences: 59808
Number of extensions: 188160
Number of successful extensions: 756
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 548040812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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