BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b11r (354 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 25 1.1 U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 25 1.1 U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 25 1.1 AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 25 1.1 Y17700-1|CAA76820.1| 122|Anopheles gambiae hypothetical protein... 24 1.9 AY825564-1|AAV70175.1| 175|Anopheles gambiae cytochrome P450 pr... 24 1.9 AY825563-1|AAV70174.1| 175|Anopheles gambiae cytochrome P450 pr... 24 1.9 AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 23 3.4 DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 23 4.4 U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles ... 22 5.9 AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 22 5.9 AY062194-1|AAL58555.1| 151|Anopheles gambiae cytochrome P450 CY... 22 7.8 >U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette protein protein. Length = 695 Score = 24.6 bits (51), Expect = 1.1 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = -1 Query: 156 NLFGREVGPAVNNFLEKIPVYLTDYAAEVSRVLEYVAQLVINRLPV 19 N+ + V +N F ++PV+L + + + RV Y I LP+ Sbjct: 481 NMTFQNVFAVINVFSAELPVFLREKRSRLYRVDTYFLGKTIAELPL 526 >U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette protein protein. Length = 695 Score = 24.6 bits (51), Expect = 1.1 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = -1 Query: 156 NLFGREVGPAVNNFLEKIPVYLTDYAAEVSRVLEYVAQLVINRLPV 19 N+ + V +N F ++PV+L + + + RV Y I LP+ Sbjct: 481 NMTFQNVFAVINVFSAELPVFLREKRSRLYRVDTYFLGKTIAELPL 526 >U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette protein protein. Length = 673 Score = 24.6 bits (51), Expect = 1.1 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = -1 Query: 156 NLFGREVGPAVNNFLEKIPVYLTDYAAEVSRVLEYVAQLVINRLPV 19 N+ + V +N F ++PV+L + + + RV Y I LP+ Sbjct: 459 NMTFQNVFAVINVFSAELPVFLREKRSRLYRVDTYFLGKTIAELPL 504 >AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. Length = 2259 Score = 24.6 bits (51), Expect = 1.1 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +1 Query: 283 GSERPQDAAENADFSFSGTD 342 GSE+P++A E + + SGTD Sbjct: 1348 GSEKPKNAIEPSQEAVSGTD 1367 >Y17700-1|CAA76820.1| 122|Anopheles gambiae hypothetical protein protein. Length = 122 Score = 23.8 bits (49), Expect = 1.9 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = -1 Query: 126 VNNFLEKIPVYLTDYAAEVS 67 VN EK+P YL++ +A V+ Sbjct: 88 VNAIYEKLPAYLSEVSARVN 107 >AY825564-1|AAV70175.1| 175|Anopheles gambiae cytochrome P450 protein. Length = 175 Score = 23.8 bits (49), Expect = 1.9 Identities = 18/63 (28%), Positives = 31/63 (49%) Frame = +1 Query: 40 ELGDVLQNTADLGCVVRQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDND 219 +LGD +N D+G R DL+ E + +N + EEI EV + + ++ + Sbjct: 1 DLGDNDEN--DIGEKRRLAFLDLMIETANNGANISDEEIKEEVDTIMFEGHDTTAAGSSF 58 Query: 220 VVC 228 V+C Sbjct: 59 VLC 61 >AY825563-1|AAV70174.1| 175|Anopheles gambiae cytochrome P450 protein. Length = 175 Score = 23.8 bits (49), Expect = 1.9 Identities = 18/63 (28%), Positives = 31/63 (49%) Frame = +1 Query: 40 ELGDVLQNTADLGCVVRQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDND 219 +LGD +N D+G R DL+ E + +N + EEI EV + + ++ + Sbjct: 1 DLGDNDEN--DIGEKRRLAFLDLMIETANNGANISDEEIKEEVDTIMFEGHDTTAAGSSF 58 Query: 220 VVC 228 V+C Sbjct: 59 VLC 61 >AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. Length = 1376 Score = 23.0 bits (47), Expect = 3.4 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = +1 Query: 241 SGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD 342 S ++ ND +K +SGS + Q E F F D Sbjct: 1270 SVTIKNDPMK--TSGSTQQQQQMERQQFGFGNND 1301 >DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. Length = 847 Score = 22.6 bits (46), Expect = 4.4 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -3 Query: 85 LRSRGQPCSGVRRPTRHQQI 26 L + P G RRPT++QQI Sbjct: 16 LANEFNPNRGRRRPTKNQQI 35 >U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles gambiae putativecuticle protein mRNA, partial cds. ). Length = 160 Score = 22.2 bits (45), Expect = 5.9 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -3 Query: 97 LPDGLRSRGQPCSGVRR 47 LP RSR +P GVRR Sbjct: 3 LPRSPRSRTRPARGVRR 19 Score = 21.8 bits (44), Expect = 7.8 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = +2 Query: 125 TAGPTSRPKRLIWRLDLTSP-IVIAAPMSLTMMLSARETEAVASATTFSRASPPEAK 292 TA P + ++ R L + IV AAP++ ++ A A T S A+P K Sbjct: 68 TADPHNGFNAVVRREPLAAKTIVAAAPVATKVIAQPAVAYAAPVAKTISYAAPVATK 124 >AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein protein. Length = 468 Score = 22.2 bits (45), Expect = 5.9 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%) Frame = +3 Query: 42 VGRRTPEHG*PRLRSP--SGRQGS 107 VG++ P G P LR+P +G GS Sbjct: 20 VGKQLPASGIPTLRAPMAAGNAGS 43 >AY062194-1|AAL58555.1| 151|Anopheles gambiae cytochrome P450 CYP4D16 protein. Length = 151 Score = 21.8 bits (44), Expect = 7.8 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -3 Query: 325 RNPHFQPRPEVF 290 RNP F P PE F Sbjct: 108 RNPEFFPNPEKF 119 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 304,945 Number of Sequences: 2352 Number of extensions: 5929 Number of successful extensions: 67 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 67 length of database: 563,979 effective HSP length: 57 effective length of database: 429,915 effective search space used: 25794900 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -