Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b11r
(354 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L08825-1|AAA28914.1| 723|Drosophila melanogaster single-strande... 29 1.7
AE013599-2072|AAM70976.1| 733|Drosophila melanogaster CG30471-P... 29 2.2
AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-P... 27 5.2
X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein pr... 27 6.9
AL138972-11|CAB72294.1| 1212|Drosophila melanogaster EG:BACR25B3... 27 6.9
AF132186-1|AAD34774.1| 1212|Drosophila melanogaster unknown prot... 27 6.9
AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-P... 27 6.9
AE014298-417|AAF45793.1| 1212|Drosophila melanogaster CG8590-PA ... 27 6.9
X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein. 27 9.1
BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p pro... 27 9.1
AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA... 27 9.1
AE013599-1072|AAF58808.1| 1698|Drosophila melanogaster CG12904-P... 27 9.1
>L08825-1|AAA28914.1| 723|Drosophila melanogaster single-stranded
recognition proteinprotein.
Length = 723
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +1
Query: 124 DGWSNFASEEIDL---EVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSER 294
DG S+ S + D E D+A Y S++ +D+D + G G S+ K K SE+
Sbjct: 469 DGDSDEESTDEDFKPNENESDVAEEYDSNEESDSDEDSDASGGGGDSDGAKKKKEKKSEK 528
Query: 295 PQ 300
+
Sbjct: 529 KE 530
>AE013599-2072|AAM70976.1| 733|Drosophila melanogaster CG30471-PA
protein.
Length = 733
Score = 28.7 bits (61), Expect = 2.2
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +2
Query: 20 TGNLLMTSWATYSRTRLTSAA*SVR*TGIFSRKLLTAGPTSRPKRLIWRLDLTSPIVIAA 199
T +L + A +S T S TG++ +LL A RL + + L +P+VIA
Sbjct: 617 TISLFVLGRALFSLTICWMIVGSASGTGVWWSRLLEAKFFQHLNRLSYAIYLLNPLVIAL 676
Query: 200 PMSLTMMLSA 229
SLT SA
Sbjct: 677 VYSLTSTSSA 686
>AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-PA
protein.
Length = 692
Score = 27.5 bits (58), Expect = 5.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 178 CQI*PPNQSLRTRSWTSRQQLPREDPCL 95
C I PP+ S +T + +QL REDP L
Sbjct: 405 CSIEPPSVSSQTAMEQALKQLQREDPSL 432
>X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein
protein.
Length = 2175
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 235 DGSGSLSNDVLKGKSSGSERPQDAAENAD 321
+ + S S+D K ++ +ERP DA+ NAD
Sbjct: 507 NNNNSQSSDNNKKLNTAAERPMDASSNAD 535
>AL138972-11|CAB72294.1| 1212|Drosophila melanogaster EG:BACR25B3.9
protein.
Length = 1212
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 178 IANSYCSS--DVTDNDVVC-EGDGSGSLSNDVLKGKSSGSERPQDAAENA 318
+ S C + ++ D+ C +GDG + D K G + PQ + ENA
Sbjct: 1103 VCKSNCRNPLNLKDHASQCGDGDGQKDETEDADKSDDDGDDEPQTSKENA 1152
>AF132186-1|AAD34774.1| 1212|Drosophila melanogaster unknown protein.
Length = 1212
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 178 IANSYCSS--DVTDNDVVC-EGDGSGSLSNDVLKGKSSGSERPQDAAENA 318
+ S C + ++ D+ C +GDG + D K G + PQ + ENA
Sbjct: 1103 VCKSNCRNPLNLKDHASQCGDGDGQKDETEDADKSDDDGDDEPQTSKENA 1152
>AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-PA,
isoform A protein.
Length = 2175
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 235 DGSGSLSNDVLKGKSSGSERPQDAAENAD 321
+ + S S+D K ++ +ERP DA+ NAD
Sbjct: 507 NNNNSQSSDNNKKLNTAAERPMDASSNAD 535
>AE014298-417|AAF45793.1| 1212|Drosophila melanogaster CG8590-PA
protein.
Length = 1212
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 178 IANSYCSS--DVTDNDVVC-EGDGSGSLSNDVLKGKSSGSERPQDAAENA 318
+ S C + ++ D+ C +GDG + D K G + PQ + ENA
Sbjct: 1103 VCKSNCRNPLNLKDHASQCGDGDGQKDETEDADKSDDDGDDEPQTSKENA 1152
>X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein.
Length = 723
Score = 26.6 bits (56), Expect = 9.1
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +1
Query: 124 DGWSNFASEEIDL---EVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSER 294
DG S+ S + D E D+A Y S+ +D+D + G G S+ K K SE+
Sbjct: 469 DGDSDEESTDEDFKPNENESDVAEEYDSNVESDSDDDSDASGGGGDSDGAKKKKEKKSEK 528
Query: 295 PQ 300
+
Sbjct: 529 KE 530
>BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p
protein.
Length = 723
Score = 26.6 bits (56), Expect = 9.1
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +1
Query: 124 DGWSNFASEEIDL---EVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSER 294
DG S+ S + D E D+A Y S+ +D+D + G G S+ K K SE+
Sbjct: 469 DGDSDEESTDEDFKPNENESDVAEEYDSNVESDSDDDSDASGGGGDSDGAKKKKEKKSEK 528
Query: 295 PQ 300
+
Sbjct: 529 KE 530
>AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA
protein.
Length = 723
Score = 26.6 bits (56), Expect = 9.1
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +1
Query: 124 DGWSNFASEEIDL---EVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSER 294
DG S+ S + D E D+A Y S+ +D+D + G G S+ K K SE+
Sbjct: 469 DGDSDEESTDEDFKPNENESDVAEEYDSNVESDSDDDSDASGGGGDSDGAKKKKEKKSEK 528
Query: 295 PQ 300
+
Sbjct: 529 KE 530
>AE013599-1072|AAF58808.1| 1698|Drosophila melanogaster CG12904-PA
protein.
Length = 1698
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +2
Query: 137 TSRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRL 310
T+ P I + I+ + + +LSA T A +AT+ + A+PP + R+
Sbjct: 522 TANPTTTITTTVQATTTTISTTFTSSTLLSASTTTATINATSTAAAAPPPVPSVCVRV 579
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,116,540
Number of Sequences: 53049
Number of extensions: 276363
Number of successful extensions: 1153
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 859222404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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