BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b11r (354 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical pr... 28 1.6 Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical pr... 28 1.6 U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical p... 27 2.8 U41034-4|AAY43995.1| 385|Caenorhabditis elegans Hypothetical pr... 27 3.8 Z49937-8|CAD44113.1| 546|Caenorhabditis elegans Hypothetical pr... 27 5.0 Z49867-4|CAD44109.1| 546|Caenorhabditis elegans Hypothetical pr... 27 5.0 Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical pr... 27 5.0 U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical pr... 27 5.0 AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical... 26 6.6 AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical... 26 6.6 AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical... 26 6.6 Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 26 8.7 U23514-3|AAC46542.2| 421|Caenorhabditis elegans Hypothetical pr... 26 8.7 U23514-2|AAM48532.1| 418|Caenorhabditis elegans Hypothetical pr... 26 8.7 >Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical protein F02H6.2 protein. Length = 478 Score = 28.3 bits (60), Expect = 1.6 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = +1 Query: 91 QVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEG 234 Q +RD EV+D F EE+D EV D + + D D EG Sbjct: 28 QAERDGWNEVIDNVGEFEDEEVDEEV--DEEEDHAEDEERDTDDEVEG 73 >Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical protein F02H6.2 protein. Length = 478 Score = 28.3 bits (60), Expect = 1.6 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = +1 Query: 91 QVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEG 234 Q +RD EV+D F EE+D EV D + + D D EG Sbjct: 28 QAERDGWNEVIDNVGEFEDEEVDEEV--DEEEDHAEDEERDTDDEVEG 73 >U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical protein ZK1290.10 protein. Length = 412 Score = 27.5 bits (58), Expect = 2.8 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = +2 Query: 164 RLDLTSPIVIAAPMSLTMM-LSARETEAVASATTFSRASPPEAK 292 RLD T P+ A P+ L ++ ++ +E + AS T+ A+PP A+ Sbjct: 59 RLDNTIPVPPALPIGLPIIQITTKEPQPPASLTSLP-AAPPSAQ 101 >U41034-4|AAY43995.1| 385|Caenorhabditis elegans Hypothetical protein M02D8.7 protein. Length = 385 Score = 27.1 bits (57), Expect = 3.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 140 SRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETE 241 S PK I R++ SP+V AP+ + +L TE Sbjct: 330 SDPKTYIARIEALSPVVRMAPLRILDILERTRTE 363 >Z49937-8|CAD44113.1| 546|Caenorhabditis elegans Hypothetical protein C33D3.5 protein. Length = 546 Score = 26.6 bits (56), Expect = 5.0 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = -1 Query: 123 NNFLEKIPVYLTDYAAEVSRVLEYVAQLVINRLPVNY 13 NNF++ Y+ +++ QL+INR P+NY Sbjct: 325 NNFIDTAMAYVFTLIGGSKHIVD---QLIINRSPINY 358 >Z49867-4|CAD44109.1| 546|Caenorhabditis elegans Hypothetical protein C33D3.5 protein. Length = 546 Score = 26.6 bits (56), Expect = 5.0 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = -1 Query: 123 NNFLEKIPVYLTDYAAEVSRVLEYVAQLVINRLPVNY 13 NNF++ Y+ +++ QL+INR P+NY Sbjct: 325 NNFIDTAMAYVFTLIGGSKHIVD---QLIINRSPINY 358 >Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical protein T16G12.4 protein. Length = 213 Score = 26.6 bits (56), Expect = 5.0 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = -1 Query: 105 IPVYLTDY-AAEVSRVLEYVAQLVINRLPVNYSN 7 IP++LTDY A+E R + Y + + + +NY + Sbjct: 119 IPIFLTDYFASEAQRYMNYPHEWKVFKDFINYES 152 >U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical protein F09E5.5 protein. Length = 796 Score = 26.6 bits (56), Expect = 5.0 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = -1 Query: 159 INLFGREVGPAVNNFLEKIPVYLTDYAAEVSRVLEYVAQLV 37 INL +E + + Y TDY AE S+ E+ + ++ Sbjct: 459 INLTIQEFNELAGKYRDAFTAYKTDYFAERSKYQEFTSNII 499 >AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical protein Y47G6A.19b protein. Length = 438 Score = 26.2 bits (55), Expect = 6.6 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -1 Query: 198 AAITIGDVKSNLQINLFGREVGPAVNNFLEKIPVYL 91 AAI NL +N GRE P + N+L+ I +Y+ Sbjct: 158 AAIHTASYFINLIVN--GREEDPQIQNYLDNIVLYI 191 >AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical protein Y47G6A.19a protein. Length = 468 Score = 26.2 bits (55), Expect = 6.6 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -1 Query: 198 AAITIGDVKSNLQINLFGREVGPAVNNFLEKIPVYL 91 AAI NL +N GRE P + N+L+ I +Y+ Sbjct: 158 AAIHTASYFINLIVN--GREEDPQIQNYLDNIVLYI 191 >AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical protein Y47G6A.19c protein. Length = 464 Score = 26.2 bits (55), Expect = 6.6 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -1 Query: 198 AAITIGDVKSNLQINLFGREVGPAVNNFLEKIPVYL 91 AAI NL +N GRE P + N+L+ I +Y+ Sbjct: 158 AAIHTASYFINLIVN--GREEDPQIQNYLDNIVLYI 191 >Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical protein C05A9.1 protein. Length = 1283 Score = 25.8 bits (54), Expect = 8.7 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = -1 Query: 261 VVAEATASVSLADNIIVSDIGAAITIGDVKSNLQIN 154 VVA +++ A+ IIV + G + +GD K + +N Sbjct: 597 VVAHRLSTIRNANKIIVMEKGEIVEVGDHKQLIAMN 632 >U23514-3|AAC46542.2| 421|Caenorhabditis elegans Hypothetical protein F48E8.7a protein. Length = 421 Score = 25.8 bits (54), Expect = 8.7 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 9/121 (7%) Frame = -1 Query: 345 SVGSAEGEIRIFSRVLRSFASGGLALENVVAEAT--ASVSLADNIIVSDIGAAITIGDVK 172 S+G ++ + S +R+F +E + A++ + L+DN+ +SD G A+ + Sbjct: 280 SIGEKLKKLNL-SGTVRNFGINNKHIEILAAKSNYVTDLDLSDNVEISDPGLAVILNKFP 338 Query: 171 SNLQINL---FGREVGPAVNNFLEKIPVYLTDYA----AEVSRVLEYVAQLVINRLPVNY 13 I+L +G + V+ + VYL + + LE + L +NR N+ Sbjct: 339 RLTTISLNRCYGLDPNMVVHFNSKPSLVYLNVHGCVSDTNMELFLEMCSNLKVNRQYFNF 398 Query: 12 S 10 + Sbjct: 399 T 399 >U23514-2|AAM48532.1| 418|Caenorhabditis elegans Hypothetical protein F48E8.7b protein. Length = 418 Score = 25.8 bits (54), Expect = 8.7 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 9/121 (7%) Frame = -1 Query: 345 SVGSAEGEIRIFSRVLRSFASGGLALENVVAEAT--ASVSLADNIIVSDIGAAITIGDVK 172 S+G ++ + S +R+F +E + A++ + L+DN+ +SD G A+ + Sbjct: 277 SIGEKLKKLNL-SGTVRNFGINNKHIEILAAKSNYVTDLDLSDNVEISDPGLAVILNKFP 335 Query: 171 SNLQINL---FGREVGPAVNNFLEKIPVYLTDYA----AEVSRVLEYVAQLVINRLPVNY 13 I+L +G + V+ + VYL + + LE + L +NR N+ Sbjct: 336 RLTTISLNRCYGLDPNMVVHFNSKPSLVYLNVHGCVSDTNMELFLEMCSNLKVNRQYFNF 395 Query: 12 S 10 + Sbjct: 396 T 396 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,983,554 Number of Sequences: 27780 Number of extensions: 131355 Number of successful extensions: 496 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 480 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 496 length of database: 12,740,198 effective HSP length: 73 effective length of database: 10,712,258 effective search space used: 471339352 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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