BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b11r (354 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 25 0.26 AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 1.9 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 2.5 AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 3.3 U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 21 4.3 AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 21 4.3 AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 21 4.3 AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 21 4.3 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 5.7 DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 20 7.5 AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 20 7.5 AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 20 7.5 DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 20 9.9 DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 9.9 DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 9.9 DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 9.9 DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 9.9 AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 20 9.9 AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 20 9.9 >DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monooxygenase protein. Length = 548 Score = 25.0 bits (52), Expect = 0.26 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -3 Query: 346 ISRFR*RRNPHFQPRPEVF 290 I F+ R PH P P+VF Sbjct: 442 IGTFKLHRQPHIYPNPDVF 460 >AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 22.2 bits (45), Expect = 1.9 Identities = 10/28 (35%), Positives = 13/28 (46%) Frame = +2 Query: 245 VASATTFSRASPPEAKDLRTRLKMRISP 328 + +T+F R PP A R L R P Sbjct: 378 IGPSTSFPRFIPPNAYRFRPPLNPRFGP 405 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 21.8 bits (44), Expect = 2.5 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = +1 Query: 229 EGDGSGSLSNDVLKGKSSGSERP 297 EG G SL + +G+ +G+E P Sbjct: 731 EGSGGDSLRTLLQRGQETGAEWP 753 >AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter transporter-1A protein. Length = 203 Score = 21.4 bits (43), Expect = 3.3 Identities = 6/6 (100%), Positives = 6/6 (100%) Frame = -3 Query: 199 SCNNYW 182 SCNNYW Sbjct: 100 SCNNYW 105 >U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor protein. Length = 95 Score = 21.0 bits (42), Expect = 4.3 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = -3 Query: 49 RPTRHQQITCKLL 11 R RH+++TC LL Sbjct: 37 RADRHRRVTCDLL 49 >AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. Length = 104 Score = 21.0 bits (42), Expect = 4.3 Identities = 6/12 (50%), Positives = 10/12 (83%) Frame = -3 Query: 46 PTRHQQITCKLL 11 P RH+++TC +L Sbjct: 56 PLRHRRVTCDVL 67 >AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin precursor protein. Length = 95 Score = 21.0 bits (42), Expect = 4.3 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = -3 Query: 49 RPTRHQQITCKLL 11 R RH+++TC LL Sbjct: 37 RADRHRRVTCDLL 49 >AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. Length = 57 Score = 21.0 bits (42), Expect = 4.3 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = -3 Query: 49 RPTRHQQITCKLL 11 R RH+++TC LL Sbjct: 12 RADRHRRVTCDLL 24 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 20.6 bits (41), Expect = 5.7 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = -3 Query: 166 PPNQSLRTRSWTSRQQLPREDP 101 PP S T S +QQLP P Sbjct: 1269 PPAYSCGTVSVPQQQQLPPSSP 1290 >DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. Length = 471 Score = 20.2 bits (40), Expect = 7.5 Identities = 7/19 (36%), Positives = 11/19 (57%) Frame = -3 Query: 250 GYRFRLPRRQHHCQ*HRSC 194 GY++ P Q H + H +C Sbjct: 311 GYKYITPLIQKHLKIHDTC 329 >AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methyltransferase protein. Length = 683 Score = 20.2 bits (40), Expect = 7.5 Identities = 7/17 (41%), Positives = 12/17 (70%) Frame = -3 Query: 55 VRRPTRHQQITCKLLEP 5 V+ PT+HQ++ K + P Sbjct: 117 VQPPTKHQKLDQKFIFP 133 >AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase protein. Length = 1143 Score = 20.2 bits (40), Expect = 7.5 Identities = 8/21 (38%), Positives = 11/21 (52%) Frame = -3 Query: 67 PCSGVRRPTRHQQITCKLLEP 5 P SG P HQ++ L+P Sbjct: 393 PISGSATPVFHQEMALYYLKP 413 >DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4 protein. Length = 128 Score = 19.8 bits (39), Expect = 9.9 Identities = 7/13 (53%), Positives = 8/13 (61%) Frame = -3 Query: 97 LPDGLRSRGQPCS 59 LPD L + PCS Sbjct: 67 LPDALENECSPCS 79 >DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride channel variant 4 protein. Length = 489 Score = 19.8 bits (39), Expect = 9.9 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +3 Query: 3 IGSSNLQVIC**RVGRRTPEH 65 I +S L+ +C VGR+ P H Sbjct: 374 IYASLLEFVCVNYVGRKRPMH 394 >DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride channel variant 3 protein. Length = 475 Score = 19.8 bits (39), Expect = 9.9 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +3 Query: 3 IGSSNLQVIC**RVGRRTPEH 65 I +S L+ +C VGR+ P H Sbjct: 343 IYASLLEFVCVNYVGRKRPMH 363 >DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride channel variant 1 protein. Length = 509 Score = 19.8 bits (39), Expect = 9.9 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +3 Query: 3 IGSSNLQVIC**RVGRRTPEH 65 I +S L+ +C VGR+ P H Sbjct: 394 IYASLLEFVCVNYVGRKRPMH 414 >DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride channel protein. Length = 458 Score = 19.8 bits (39), Expect = 9.9 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +3 Query: 3 IGSSNLQVIC**RVGRRTPEH 65 I +S L+ +C VGR+ P H Sbjct: 343 IYASLLEFVCVNYVGRKRPMH 363 >AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein protein. Length = 128 Score = 19.8 bits (39), Expect = 9.9 Identities = 7/13 (53%), Positives = 8/13 (61%) Frame = -3 Query: 97 LPDGLRSRGQPCS 59 LPD L + PCS Sbjct: 67 LPDALENECSPCS 79 >AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein 75 protein. Length = 900 Score = 19.8 bits (39), Expect = 9.9 Identities = 9/38 (23%), Positives = 17/38 (44%) Frame = +2 Query: 170 DLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPP 283 D+T + +P+ + + VAS T + +PP Sbjct: 479 DVTLDEAVKSPLGSVSSTESTCSGEVASLTEYHHVAPP 516 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 85,021 Number of Sequences: 438 Number of extensions: 1523 Number of successful extensions: 19 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 19 length of database: 146,343 effective HSP length: 51 effective length of database: 124,005 effective search space used: 8184330 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 39 (20.8 bits)
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