Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b11f
(401 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 26 0.16
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 24 0.49
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 24 0.49
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 22 2.0
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 22 2.0
AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory recept... 22 2.6
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 3.4
AY920544-1|AAX62142.1| 463|Tribolium castaneum cytochrome P450 ... 21 4.5
AF265300-1|AAG17643.1| 126|Tribolium castaneum putative cytochr... 21 4.5
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 21 6.0
AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein. 21 6.0
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 20 7.9
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 25.8 bits (54), Expect = 0.16
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3
Query: 153 RSCNNYWRCQ 182
+SCN YW+CQ
Sbjct: 168 KSCNRYWQCQ 177
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 24.2 bits (50), Expect = 0.49
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 150 HRSCNNYWRC 179
H SC+ YW+C
Sbjct: 35 HTSCDKYWKC 44
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 24.2 bits (50), Expect = 0.49
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +3
Query: 150 HRSCNNYWRC 179
H SC+ YW+C
Sbjct: 35 HTSCDKYWKC 44
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 22.2 bits (45), Expect = 2.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 89 SRASPPEAKDLRTRLKMRISPSAEPTD 9
S S E KD+ T L SP+ +P D
Sbjct: 116 SPKSEKEEKDMETTLTPCASPNRKPDD 142
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 22.2 bits (45), Expect = 2.0
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 368 KLCSLKIVKKK 400
KLC +KIVKK+
Sbjct: 366 KLCGMKIVKKR 376
>AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory receptor
candidate 58 protein.
Length = 376
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 399 FFLTILREHNLFLIHKYRSSNL 334
FF + L NL+L HK S+L
Sbjct: 257 FFTSTLEIDNLYLKHKLEISSL 278
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 3.4
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 317 TSWATYSRTRLTSAA*SVR*TGIFSRKLLTAGPTSRP 207
TS TYS + ++ SV T + L G TS+P
Sbjct: 91 TSNPTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQP 127
>AY920544-1|AAX62142.1| 463|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 463
Score = 21.0 bits (42), Expect = 4.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 9 ISRFR*RRNPHFQPRPEVF 65
IS F R+P + P PE F
Sbjct: 378 ISMFAIHRDPQYFPDPEKF 396
>AF265300-1|AAG17643.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenase protein.
Length = 126
Score = 21.0 bits (42), Expect = 4.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +3
Query: 9 ISRFR*RRNPHFQPRPEVF 65
I +F RNP + P P+ F
Sbjct: 90 IGQFLVHRNPKYFPNPDKF 108
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 20.6 bits (41), Expect = 6.0
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = -1
Query: 116 EAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTD 9
E V + ++A P ++DL T L + +P D
Sbjct: 398 EEVTQKPSSTKAPAPPSRDLTTTLCTKAGYVRDPDD 433
>AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein.
Length = 247
Score = 20.6 bits (41), Expect = 6.0
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +3
Query: 27 RRNPHFQPR 53
RRNP+++PR
Sbjct: 228 RRNPYYRPR 236
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 20.2 bits (40), Expect = 7.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 27 RRNPHFQPRPEVFRFRRTCP 86
RRN +PRP + R T P
Sbjct: 325 RRNEPKRPRPNIDRHEVTRP 344
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,967
Number of Sequences: 336
Number of extensions: 1581
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8646818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -