Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b11f
(401 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0506 + 4017568-4017716,4018171-4018474 30 0.60
11_01_0533 + 4214900-4215162,4215986-4219043,4219613-4221539,422... 30 0.60
04_04_1110 + 30973202-30973870 30 0.60
03_05_1122 + 30546314-30549277,30549615-30549693,30549857-305499... 30 0.60
03_02_0114 + 5704002-5704037,5704547-5704666,5705040-5705076,570... 29 1.8
12_02_0820 + 23437811-23440230,23440336-23440534 28 2.4
05_03_0478 - 14526180-14526578 28 2.4
01_06_0034 + 25769436-25769701,25769749-25769887 28 3.2
12_02_0959 + 24818310-24818369,24818689-24819136,24819265-248194... 27 4.2
12_01_0149 - 1150949-1151041,1151145-1151190,1151343-1151460,115... 27 4.2
06_03_0291 + 19198302-19198333,19199218-19199734,19200171-192003... 27 4.2
05_06_0263 + 26752759-26754393 27 4.2
05_05_0321 + 24091997-24092530 27 4.2
02_05_1057 + 33809982-33810366,33810436-33810687,33810727-338109... 27 4.2
08_02_1171 + 24880363-24881355,24882553-24882702,24883505-248842... 27 5.6
09_02_0067 - 3812508-3813158,3813944-3814030,3814124-3814312,381... 27 7.3
06_01_0336 + 2427017-2427121,2427585-2427662,2427889-2427960,242... 27 7.3
05_01_0019 - 129767-129931,130078-130257,130491-130728,130833-13... 27 7.3
01_04_0149 - 16826019-16826023,16826065-16826635 27 7.3
11_01_0417 - 3214320-3214435,3214606-3214702,3214766-3214768,321... 26 9.7
09_02_0066 + 3801810-3802412,3802602-3802745,3803027-3803152,380... 26 9.7
09_02_0047 - 3528462-3528986,3531432-3531818 26 9.7
03_05_0892 + 28563151-28563669,28563977-28564035,28564170-285642... 26 9.7
03_05_0851 + 28225608-28226570 26 9.7
03_05_0373 + 23581812-23583293 26 9.7
02_01_0503 + 3669758-3670059,3670351-3670870 26 9.7
01_07_0294 + 42571700-42573373,42573653-42573720,42573785-425738... 26 9.7
>12_01_0506 + 4017568-4017716,4018171-4018474
Length = 150
Score = 30.3 bits (65), Expect = 0.60
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = -3
Query: 291 TADLGCVVRQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGS 112
T +L V+ + ++ DG ++ ++ E D+E++ D Y + DV + V E GS
Sbjct: 72 TGELDVAYIYVEEPEIVDLCDGSADNSNYEADMELKVDSEEEYVNMDVEVD--VGEATGS 129
Query: 111 GSLSNDVLK-GKSSGS 67
G V + G++SGS
Sbjct: 130 GCKGKAVEEHGEASGS 145
>11_01_0533 + 4214900-4215162,4215986-4219043,4219613-4221539,
4221561-4222094,4222388-4222842,4223073-4223189,
4223319-4223477
Length = 2170
Score = 30.3 bits (65), Expect = 0.60
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +1
Query: 4 SASVGSAEGEIRIFSRVLRSFASGGLALENVVAEATASVSLADNIIVSD--IGAAITIGD 177
S S E +R +R+L + +A + V + S N +S+ IGA I +G
Sbjct: 1440 SGSTFVVEPAVRALNRLLDEEYNAEIAATSEVVDLLVSFVPGTNHQLSEACIGALIKLGK 1499
Query: 178 VKSNLQINLFGREVGPAVNNFLEKIPVYLTDYAAEVSRVL 297
+ N ++ + + V + + +PV ++ AE+ R+L
Sbjct: 1500 DRPNCKLEMVKAGIIEHVLDMILDVPVSVSSSIAELLRIL 1539
>04_04_1110 + 30973202-30973870
Length = 222
Score = 30.3 bits (65), Expect = 0.60
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -1
Query: 188 LDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEP 15
L + + + +P S T+ S+R+T A A ++A P + L L M +A+P
Sbjct: 97 LPKAAALAVVSPTSSTVESSSRDTPAAAPVAAAAKAQVPASPSLDLSLGMSAMVAAQP 154
>03_05_1122 +
30546314-30549277,30549615-30549693,30549857-30549945,
30550422-30550538,30550873-30551111,30552279-30552365,
30552732-30552831,30553319-30553532,30553617-30553777
Length = 1349
Score = 30.3 bits (65), Expect = 0.60
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = -3
Query: 222 SNFASEEIDLEVRFDIANSYCSSDVTDN---DVVCEGDGSGSLSNDVLKGKSSG 70
SN +D E +A C D+ + D++ EGD G L+ D + G
Sbjct: 54 SNSMKMHVDAETAGGVALDVCKGDILEKKQCDIIAEGDRGGVLTVDTCNAEEDG 107
>03_02_0114 +
5704002-5704037,5704547-5704666,5705040-5705076,
5705905-5705981,5706642-5706755,5706902-5706969,
5707051-5707129,5707367-5707511,5707627-5707731,
5707917-5707994,5708192-5708247,5708533-5708651,
5708853-5709096,5709203-5709385,5709956-5710264,
5710350-5710399,5711042-5711102,5711184-5711267,
5711461-5711577,5711665-5711831,5711938-5712010,
5712497-5712581,5712693-5712886,5713073-5713228
Length = 918
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -3
Query: 207 EEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSER-PQDAAENADF 31
EE D E+ D+ + CSSD + + D S NDV SG + +D ++ ++
Sbjct: 419 EEYD-EIFDDLEDGSCSSDAYTDSEDGDVDKEYSTDNDVDGSYDSGEDNIEEDMEDDTEY 477
Query: 30 SFSGTD 13
S G++
Sbjct: 478 SSGGSE 483
>12_02_0820 + 23437811-23440230,23440336-23440534
Length = 872
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -3
Query: 318 DELGDVLQNTADLGC-VVRQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTD 142
D+L +Q+ ++ VR + + + ++ WS+ EEI DI + Y S D
Sbjct: 252 DKLATYMQDIFNITAKAVRGDEESVALQAIEFWSSICDEEI------DILDEYSSEFTAD 305
Query: 141 NDVVC 127
+DV C
Sbjct: 306 SDVPC 310
>05_03_0478 - 14526180-14526578
Length = 132
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = +3
Query: 216 SWTSRQQLPREDPCLPDGLRS---RGQPCSGVRRPTRH 320
SW RQ+ ED DG R RGQ RRP RH
Sbjct: 54 SWARRQRRDEEDHRQHDGYRGARRRGQEDHRRRRPRRH 91
>01_06_0034 + 25769436-25769701,25769749-25769887
Length = 134
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 153 DVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAE 43
+V +D +C+G+G G + G ++ RPQ A E
Sbjct: 16 EVESSDTICQGEGPGEGGHPDPAGPAAALLRPQVAGE 52
>12_02_0959 +
24818310-24818369,24818689-24819136,24819265-24819482,
24819651-24819929
Length = 334
Score = 27.5 bits (58), Expect = 4.2
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = -3
Query: 153 DVTDNDVV---CEGDGSGSLSNDVLKGKSSGSER 61
++ +ND++ C G G+GS S DVL +SG E+
Sbjct: 73 ELQENDLLFFTCNGHGNGSCSFDVLIFDASGCEK 106
>12_01_0149 -
1150949-1151041,1151145-1151190,1151343-1151460,
1151541-1151637,1151711-1151908,1152024-1152086,
1152384-1152443,1152558-1152660,1154398-1154507
Length = 295
Score = 27.5 bits (58), Expect = 4.2
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = -3
Query: 228 GWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSE 64
GWSN D D+A + S + +D+ E +L D+LK + SE
Sbjct: 66 GWSNLVCSREDHAKSVDVAVLFLGSKLQSSDISKEKQADSTLV-DMLKNSFASSE 119
>06_03_0291 +
19198302-19198333,19199218-19199734,19200171-19200383,
19201067-19201111,19201671-19201945,19202041-19202152,
19202453-19202539,19202727-19202963,19204127-19204825
Length = 738
Score = 27.5 bits (58), Expect = 4.2
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 257 TGIFSRKLLTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETEAVA 105
TG F+ +L G + L W LD TS V + P S + + E EA A
Sbjct: 564 TGFFNSDVLKGGDFCGEELLTWALDPTS--VSSLPSSTRTVKTMSEVEAFA 612
>05_06_0263 + 26752759-26754393
Length = 544
Score = 27.5 bits (58), Expect = 4.2
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Frame = +1
Query: 181 KSNLQINLFGREVGPAVNNFLEKIP----VYLTDYAAE 282
K +L+ NLFG E G A++ L K+P +YL+D E
Sbjct: 331 KLDLRDNLFGVEAGLALSKTLSKLPDLVELYLSDLNLE 368
>05_05_0321 + 24091997-24092530
Length = 177
Score = 27.5 bits (58), Expect = 4.2
Identities = 17/78 (21%), Positives = 31/78 (39%)
Frame = -3
Query: 267 RQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVL 88
RQV R E++ S+F+ + + ++ D +N GDG G +
Sbjct: 15 RQVGRSREEELLGLLSDFSGDSGEFGRELSFSDLVVVEDTANNPSPRGGDGGGDRAAPTA 74
Query: 87 KGKSSGSERPQDAAENAD 34
+G RP ++E +
Sbjct: 75 AAAENGQARPSSSSEQEE 92
>02_05_1057 +
33809982-33810366,33810436-33810687,33810727-33810926,
33811021-33811122
Length = 312
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 138 DVVCEGDGSGSLSNDVLKGKSSGSERPQDAA 46
+V C G G G+++ D +G SG R DAA
Sbjct: 120 NVGCIGGGGGNITVDGFRGGGSGGGRGGDAA 150
>08_02_1171 +
24880363-24881355,24882553-24882702,24883505-24884210,
24885012-24885404,24885759-24885805,24886088-24886111
Length = 770
Score = 27.1 bits (57), Expect = 5.6
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 3 FSISRFR*RRNPHFQPRPEVFRFRRTCP*ERRC*GYRFRLP-RRQHHCQ*HRSCNNY 170
F+ RFR NP + R R RR P RR + +P R HH H + NN+
Sbjct: 54 FARDRFRDPFNPDLRRREPRRRRRRRAPRRRR----KAMMPVRTYHHHHHHNNSNNH 106
>09_02_0067 -
3812508-3813158,3813944-3814030,3814124-3814312,
3814475-3814603,3814917-3815003,3815126-3815563
Length = 526
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 276 SRGQPCSGVRRPTRHQQITVNYSND-TCESKINY 374
S G PC +R P+ H TVN D E K+ Y
Sbjct: 150 SNGYPCPPMRNPSDHFLRTVNKDFDKESEEKLQY 183
>06_01_0336 +
2427017-2427121,2427585-2427662,2427889-2427960,
2428105-2428671,2428822-2428935,2431308-2432246
Length = 624
Score = 26.6 bits (56), Expect = 7.3
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = -1
Query: 227 AGPTSRPKRLIWRLDLTSPIVIAAPMSLTMMLSAR--ETEAVASATTFSRASPPEA 66
A TS P LDLTSP A LS R T ++ TFS + P A
Sbjct: 398 AAITSTPSYPTITLDLTSPAAAATSSHAAFSLSNRFSHTRYPSTGFTFSGSGPSSA 453
>05_01_0019 -
129767-129931,130078-130257,130491-130728,130833-131236,
131284-131427,131709-131995,132071-132150,132563-132714,
132793-132909,133292-133450,133546-133946,134106-134423,
135050-135095,135203-135310
Length = 932
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -3
Query: 183 FDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKG 82
F+ + D D D+ C G G +ND +KG
Sbjct: 213 FEFTGMSTNQDDADEDIFCTGGGMELENNDSVKG 246
>01_04_0149 - 16826019-16826023,16826065-16826635
Length = 191
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 108 SLSNDVLKGKSSGSERPQDAAENADFSFS 22
+LS + +KGK +G+E QD + +F FS
Sbjct: 89 TLSEEGIKGKLNGAEITQDEYASDEFHFS 117
>11_01_0417 -
3214320-3214435,3214606-3214702,3214766-3214768,
3215054-3215196,3215309-3215348,3215713-3215765,
3215889-3215962,3216081-3216163,3216287-3216355,
3216456-3216800
Length = 340
Score = 26.2 bits (55), Expect = 9.7
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = -3
Query: 321 DDELGDVLQNTADLGCVVRQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTD 142
+DEL +LQ+ AD+ + + + V+G S E+ L V+ + + ++ D
Sbjct: 117 EDELLSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLLVK-QLIRKW--KEIVD 173
Query: 141 NDVVCEGDGSGSLSNDVLKGKSSGSE---RPQDAAENADFSFS 22
D V + SG SN ++ +S + + Q +++ ++F +S
Sbjct: 174 -DWVRLHNSSGDASNSIITDGNSPEKIQGKNQQSSQVSEFKYS 215
>09_02_0066 +
3801810-3802412,3802602-3802745,3803027-3803152,
3803709-3803796,3804005-3804098,3804670-3804763,
3805133-3805187,3805675-3805766,3805896-3806066,
3806217-3806273,3806531-3806615,3806946-3807007,
3807259-3807333,3807452-3807556,3807924-3808065,
3808312-3808385
Length = 688
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 247 KIPVYLTDYAAEVSRVLEYVAQLVINRL 330
++P+ + DY E LEYV + IN L
Sbjct: 381 RVPLIMWDYTTEKVLTLEYVPGIKINNL 408
>09_02_0047 - 3528462-3528986,3531432-3531818
Length = 303
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 61 SFASGGLALENVVAEATASVSLADNI 138
SFAS G L+N+ A+ ++++L+ I
Sbjct: 113 SFASAGTGLDNITAQILSAMTLSQQI 138
>03_05_0892 +
28563151-28563669,28563977-28564035,28564170-28564295,
28564460-28564595,28564901-28565209
Length = 382
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 188 LDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPE 69
LDL + P S ML +ETE++A S +P E
Sbjct: 279 LDLMEQEELTLPPSQQKMLRVKETESLADHQKLSAGNPQE 318
>03_05_0851 + 28225608-28226570
Length = 320
Score = 26.2 bits (55), Expect = 9.7
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 144 DNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENA 37
D VCE DGS SLS D GK P D A
Sbjct: 109 DASSVCEEDGSSSLSVD---GKQQQHSNPADRGGGA 141
>03_05_0373 + 23581812-23583293
Length = 493
Score = 26.2 bits (55), Expect = 9.7
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +1
Query: 16 GSAEGEIRIFSRVLRSFASGGLA-----LENVVAEATASVSLADNIIVSDIGAAITIG 174
GSA+G ++++ R ASGG A LE V+ E ++V+ I VS G + +G
Sbjct: 282 GSADGTVKVWRREEEPAASGGEAKTRHVLETVLREDESAVTA---IAVSAEGRVVYVG 336
>02_01_0503 + 3669758-3670059,3670351-3670870
Length = 273
Score = 26.2 bits (55), Expect = 9.7
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 112 ASVSLA-DNIIVSDIG-AAITIGDVKSNLQINLFGREVGPA 228
ASV+LA D + S G A +GDV + L ++FG+E+ P+
Sbjct: 204 ASVALATDGVASSHHGDAQAQLGDVVAALAASVFGQELFPS 244
>01_07_0294 +
42571700-42573373,42573653-42573720,42573785-42573819,
42573988-42574061,42574491-42574726,42574958-42575044,
42575356-42575455,42575584-42576003
Length = 897
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = -1
Query: 242 RKLLTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAK 63
+K A P + + + +S A+P + + ++AR+ + T + PPEAK
Sbjct: 313 KKAAVASPAATRSKTRSKCKTSSNSAAASPSARSSAIAARKKNNATATGTTATPPPPEAK 372
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,409,326
Number of Sequences: 37544
Number of extensions: 184769
Number of successful extensions: 755
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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