Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b11f
         (401 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   0.78 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   1.4  
Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein...    24   2.4  
AY825564-1|AAV70175.1|  175|Anopheles gambiae cytochrome P450 pr...    24   2.4  
AY825563-1|AAV70174.1|  175|Anopheles gambiae cytochrome P450 pr...    24   2.4  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   4.2  
U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    22   7.3  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    22   7.3  
AY062194-1|AAL58555.1|  151|Anopheles gambiae cytochrome P450 CY...    22   9.6  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 0.78
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 270 LRSRGQPCSGVRRPTRHQQITVNYSNDTCESK 365
           L +   P  G RRPT++QQI   +++D  E++
Sbjct: 16  LANEFNPNRGRRRPTKNQQIYGVWADDDSENE 47


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 72   GSERPQDAAENADFSFSGTD 13
            GSE+P++A E +  + SGTD
Sbjct: 1348 GSEKPKNAIEPSQEAVSGTD 1367


>Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 229 VNNFLEKIPVYLTDYAAEVS 288
           VN   EK+P YL++ +A V+
Sbjct: 88  VNAIYEKLPAYLSEVSARVN 107


>AY825564-1|AAV70175.1|  175|Anopheles gambiae cytochrome P450
           protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = -3

Query: 315 ELGDVLQNTADLGCVVRQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDND 136
           +LGD  +N  D+G   R    DL+ E  +  +N + EEI  EV   +   + ++    + 
Sbjct: 1   DLGDNDEN--DIGEKRRLAFLDLMIETANNGANISDEEIKEEVDTIMFEGHDTTAAGSSF 58

Query: 135 VVC 127
           V+C
Sbjct: 59  VLC 61


>AY825563-1|AAV70174.1|  175|Anopheles gambiae cytochrome P450
           protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = -3

Query: 315 ELGDVLQNTADLGCVVRQVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDND 136
           +LGD  +N  D+G   R    DL+ E  +  +N + EEI  EV   +   + ++    + 
Sbjct: 1   DLGDNDEN--DIGEKRRLAFLDLMIETANNGANISDEEIKEEVDTIMFEGHDTTAAGSSF 58

Query: 135 VVC 127
           V+C
Sbjct: 59  VLC 61


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 114  SGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD 13
            S ++ ND +K  +SGS + Q   E   F F   D
Sbjct: 1270 SVTIKNDPMK--TSGSTQQQQQMERQQFGFGNND 1301


>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 258 LPDGLRSRGQPCSGVRR 308
           LP   RSR +P  GVRR
Sbjct: 3   LPRSPRSRTRPARGVRR 19



 Score = 21.8 bits (44), Expect = 9.6
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = -1

Query: 230 TAGPTSRPKRLIWRLDLTSP-IVIAAPMSLTMMLSARETEAVASATTFSRASPPEAK 63
           TA P +    ++ R  L +  IV AAP++  ++       A   A T S A+P   K
Sbjct: 68  TADPHNGFNAVVRREPLAAKTIVAAAPVATKVIAQPAVAYAAPVAKTISYAAPVATK 124


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -2

Query: 313 VGRRTPEHG*PRLRSP--SGRQGS 248
           VG++ P  G P LR+P  +G  GS
Sbjct: 20  VGKQLPASGIPTLRAPMAAGNAGS 43


>AY062194-1|AAL58555.1|  151|Anopheles gambiae cytochrome P450
           CYP4D16 protein.
          Length = 151

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 30  RNPHFQPRPEVF 65
           RNP F P PE F
Sbjct: 108 RNPEFFPNPEKF 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 346,670
Number of Sequences: 2352
Number of extensions: 7231
Number of successful extensions: 64
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)