Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b11f
(401 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic co... 33 0.47
AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic co... 33 0.47
AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coi... 33 0.47
AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprot... 29 4.4
AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein. 29 4.4
AL834247-1|CAD38923.2| 1391|Homo sapiens hypothetical protein pr... 29 5.8
AL832379-1|CAD91155.1| 1045|Homo sapiens hypothetical protein pr... 29 5.8
AL512429-2|CAH73748.1| 1320|Homo sapiens sarcomeric protein myop... 29 5.8
AL512429-1|CAH73747.1| 1045|Homo sapiens sarcomeric protein myop... 29 5.8
AF328296-1|AAK50625.1| 1320|Homo sapiens myopalladin protein. 29 5.8
>AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2948
Score = 32.7 bits (71), Expect = 0.47
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -1
Query: 233 LTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTM-MLSARETEAVASATTFSRASPPEAKDL 57
L+ PTS P ++W LT ++AP + L + E SR SPP A L
Sbjct: 910 LSDTPTSSPTDMVWESSLTEESELSAPTRQKLPALGEKRPEGACGDGQSSRVSPPAADVL 969
Query: 56 R 54
+
Sbjct: 970 K 970
>AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2675
Score = 32.7 bits (71), Expect = 0.47
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -1
Query: 233 LTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTM-MLSARETEAVASATTFSRASPPEAKDL 57
L+ PTS P ++W LT ++AP + L + E SR SPP A L
Sbjct: 637 LSDTPTSSPTDMVWESSLTEESELSAPTRQKLPALGEKRPEGACGDGQSSRVSPPAADVL 696
Query: 56 R 54
+
Sbjct: 697 K 697
>AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coiled
coil 2, long isoform protein.
Length = 2948
Score = 32.7 bits (71), Expect = 0.47
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -1
Query: 233 LTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTM-MLSARETEAVASATTFSRASPPEAKDL 57
L+ PTS P ++W LT ++AP + L + E SR SPP A L
Sbjct: 910 LSDTPTSSPTDMVWESSLTEESELSAPTRQKLPALGEKRPEGACGDGQSSRVSPPAADVL 969
Query: 56 R 54
+
Sbjct: 970 K 970
>AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprotein
precursor protein.
Length = 1253
Score = 29.5 bits (63), Expect = 4.4
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = -3
Query: 222 SNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAE 43
S+ +S+ D + + S SSD +D+D D S S S+D SS S D+++
Sbjct: 689 SSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSDSSD 748
Query: 42 NADFSFS 22
+++ S S
Sbjct: 749 SSNSSDS 755
>AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein.
Length = 788
Score = 29.5 bits (63), Expect = 4.4
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = -3
Query: 222 SNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAE 43
S+ +S+ D + + S SSD +D+D D S S S+D SS S ++++
Sbjct: 221 SSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSD 280
Query: 42 NADFSFS 22
++D S S
Sbjct: 281 SSDSSDS 287
>AL834247-1|CAD38923.2| 1391|Homo sapiens hypothetical protein
protein.
Length = 1391
Score = 29.1 bits (62), Expect = 5.8
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = +1
Query: 61 SFASGGLALENVVAEATAS---VSLADNIIVSDIGAAITIGDVKSNLQ---INLFGREVG 222
S S GLA +N + + + N ++ D+G IT DV+ N Q I+ F + +
Sbjct: 925 SMPSQGLAKKNTKSPQPVNDDNIRETKNAVIRDLGKKITFSDVRPNQQEYKISSFEQRLM 984
Query: 223 PAVNNFLEKIPVYLTD 270
+ LE+ PV +D
Sbjct: 985 NEIEFRLERTPVDESD 1000
>AL832379-1|CAD91155.1| 1045|Homo sapiens hypothetical protein
protein.
Length = 1045
Score = 29.1 bits (62), Expect = 5.8
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = +1
Query: 61 SFASGGLALENVVAEATAS---VSLADNIIVSDIGAAITIGDVKSNLQ---INLFGREVG 222
S S GLA +N + + + N ++ D+G IT DV+ N Q I+ F + +
Sbjct: 579 SMPSQGLAKKNTKSPQPVNDDNIRETKNAVIRDLGKKITFSDVRPNQQEYKISSFEQRLM 638
Query: 223 PAVNNFLEKIPVYLTD 270
+ LE+ PV +D
Sbjct: 639 NEIEFRLERTPVDESD 654
>AL512429-2|CAH73748.1| 1320|Homo sapiens sarcomeric protein
myopalladin, 145 kDa (MYOP) protein.
Length = 1320
Score = 29.1 bits (62), Expect = 5.8
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = +1
Query: 61 SFASGGLALENVVAEATAS---VSLADNIIVSDIGAAITIGDVKSNLQ---INLFGREVG 222
S S GLA +N + + + N ++ D+G IT DV+ N Q I+ F + +
Sbjct: 854 SMPSQGLAKKNTKSPQPVNDDNIRETKNAVIRDLGKKITFSDVRPNQQEYKISSFEQRLM 913
Query: 223 PAVNNFLEKIPVYLTD 270
+ LE+ PV +D
Sbjct: 914 NEIEFRLERTPVDESD 929
>AL512429-1|CAH73747.1| 1045|Homo sapiens sarcomeric protein
myopalladin, 145 kDa (MYOP) protein.
Length = 1045
Score = 29.1 bits (62), Expect = 5.8
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = +1
Query: 61 SFASGGLALENVVAEATAS---VSLADNIIVSDIGAAITIGDVKSNLQ---INLFGREVG 222
S S GLA +N + + + N ++ D+G IT DV+ N Q I+ F + +
Sbjct: 579 SMPSQGLAKKNTKSPQPVNDDNIRETKNAVIRDLGKKITFSDVRPNQQEYKISSFEQRLM 638
Query: 223 PAVNNFLEKIPVYLTD 270
+ LE+ PV +D
Sbjct: 639 NEIEFRLERTPVDESD 654
>AF328296-1|AAK50625.1| 1320|Homo sapiens myopalladin protein.
Length = 1320
Score = 29.1 bits (62), Expect = 5.8
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = +1
Query: 61 SFASGGLALENVVAEATAS---VSLADNIIVSDIGAAITIGDVKSNLQ---INLFGREVG 222
S S GLA +N + + + N ++ D+G IT DV+ N Q I+ F + +
Sbjct: 854 SMPSQGLAKKNTKSPQPVNDDNIRETKNAVIRDLGKKITFSDVRPNQQEYKISSFEQRLM 913
Query: 223 PAVNNFLEKIPVYLTD 270
+ LE+ PV +D
Sbjct: 914 NEIEFRLERTPVDESD 929
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,427,674
Number of Sequences: 237096
Number of extensions: 879690
Number of successful extensions: 2916
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2915
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -