BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b11f (401 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L08825-1|AAA28914.1| 723|Drosophila melanogaster single-strande... 29 2.3 AE013599-2072|AAM70976.1| 733|Drosophila melanogaster CG30471-P... 29 3.1 AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-P... 27 7.1 X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein pr... 27 9.4 AL138972-11|CAB72294.1| 1212|Drosophila melanogaster EG:BACR25B3... 27 9.4 AF132186-1|AAD34774.1| 1212|Drosophila melanogaster unknown prot... 27 9.4 AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-P... 27 9.4 AE014298-417|AAF45793.1| 1212|Drosophila melanogaster CG8590-PA ... 27 9.4 >L08825-1|AAA28914.1| 723|Drosophila melanogaster single-stranded recognition proteinprotein. Length = 723 Score = 29.1 bits (62), Expect = 2.3 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Frame = -3 Query: 231 DGWSNFASEEIDL---EVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSER 61 DG S+ S + D E D+A Y S++ +D+D + G G S+ K K SE+ Sbjct: 469 DGDSDEESTDEDFKPNENESDVAEEYDSNEESDSDEDSDASGGGGDSDGAKKKKEKKSEK 528 Query: 60 PQ 55 + Sbjct: 529 KE 530 >AE013599-2072|AAM70976.1| 733|Drosophila melanogaster CG30471-PA protein. Length = 733 Score = 28.7 bits (61), Expect = 3.1 Identities = 23/72 (31%), Positives = 34/72 (47%) Frame = -1 Query: 341 VIYSNLLMTSWATYSRTRLTSAA*SVR*TGIFSRKLLTAGPTSRPKRLIWRLDLTSPIVI 162 +I +L + A +S T S TG++ +LL A RL + + L +P+VI Sbjct: 615 LITISLFVLGRALFSLTICWMIVGSASGTGVWWSRLLEAKFFQHLNRLSYAIYLLNPLVI 674 Query: 161 AAPMSLTMMLSA 126 A SLT SA Sbjct: 675 ALVYSLTSTSSA 686 >AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-PA protein. Length = 692 Score = 27.5 bits (58), Expect = 7.1 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 Query: 177 CQI*PPNQSLRTRSWTSRQQLPREDPCL 260 C I PP+ S +T + +QL REDP L Sbjct: 405 CSIEPPSVSSQTAMEQALKQLQREDPSL 432 >X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein protein. Length = 2175 Score = 27.1 bits (57), Expect = 9.4 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -3 Query: 120 DGSGSLSNDVLKGKSSGSERPQDAAENAD 34 + + S S+D K ++ +ERP DA+ NAD Sbjct: 507 NNNNSQSSDNNKKLNTAAERPMDASSNAD 535 >AL138972-11|CAB72294.1| 1212|Drosophila melanogaster EG:BACR25B3.9 protein. Length = 1212 Score = 27.1 bits (57), Expect = 9.4 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = -3 Query: 177 IANSYCSS--DVTDNDVVC-EGDGSGSLSNDVLKGKSSGSERPQDAAENA 37 + S C + ++ D+ C +GDG + D K G + PQ + ENA Sbjct: 1103 VCKSNCRNPLNLKDHASQCGDGDGQKDETEDADKSDDDGDDEPQTSKENA 1152 >AF132186-1|AAD34774.1| 1212|Drosophila melanogaster unknown protein. Length = 1212 Score = 27.1 bits (57), Expect = 9.4 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = -3 Query: 177 IANSYCSS--DVTDNDVVC-EGDGSGSLSNDVLKGKSSGSERPQDAAENA 37 + S C + ++ D+ C +GDG + D K G + PQ + ENA Sbjct: 1103 VCKSNCRNPLNLKDHASQCGDGDGQKDETEDADKSDDDGDDEPQTSKENA 1152 >AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-PA, isoform A protein. Length = 2175 Score = 27.1 bits (57), Expect = 9.4 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -3 Query: 120 DGSGSLSNDVLKGKSSGSERPQDAAENAD 34 + + S S+D K ++ +ERP DA+ NAD Sbjct: 507 NNNNSQSSDNNKKLNTAAERPMDASSNAD 535 >AE014298-417|AAF45793.1| 1212|Drosophila melanogaster CG8590-PA protein. Length = 1212 Score = 27.1 bits (57), Expect = 9.4 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = -3 Query: 177 IANSYCSS--DVTDNDVVC-EGDGSGSLSNDVLKGKSSGSERPQDAAENA 37 + S C + ++ D+ C +GDG + D K G + PQ + ENA Sbjct: 1103 VCKSNCRNPLNLKDHASQCGDGDGQKDETEDADKSDDDGDDEPQTSKENA 1152 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,748,158 Number of Sequences: 53049 Number of extensions: 311041 Number of successful extensions: 1248 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1160 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1247 length of database: 24,988,368 effective HSP length: 77 effective length of database: 20,903,595 effective search space used: 1170601320 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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