Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b11f
         (401 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L08825-1|AAA28914.1|  723|Drosophila melanogaster single-strande...    29   2.3  
AE013599-2072|AAM70976.1|  733|Drosophila melanogaster CG30471-P...    29   3.1  
AE014297-3196|AAF56031.2|  692|Drosophila melanogaster CG31159-P...    27   7.1  
X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein pr...    27   9.4  
AL138972-11|CAB72294.1| 1212|Drosophila melanogaster EG:BACR25B3...    27   9.4  
AF132186-1|AAD34774.1| 1212|Drosophila melanogaster unknown prot...    27   9.4  
AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-P...    27   9.4  
AE014298-417|AAF45793.1| 1212|Drosophila melanogaster CG8590-PA ...    27   9.4  

>L08825-1|AAA28914.1|  723|Drosophila melanogaster single-stranded
           recognition proteinprotein.
          Length = 723

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = -3

Query: 231 DGWSNFASEEIDL---EVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSER 61
           DG S+  S + D    E   D+A  Y S++ +D+D   +  G G  S+   K K   SE+
Sbjct: 469 DGDSDEESTDEDFKPNENESDVAEEYDSNEESDSDEDSDASGGGGDSDGAKKKKEKKSEK 528

Query: 60  PQ 55
            +
Sbjct: 529 KE 530


>AE013599-2072|AAM70976.1|  733|Drosophila melanogaster CG30471-PA
           protein.
          Length = 733

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 23/72 (31%), Positives = 34/72 (47%)
 Frame = -1

Query: 341 VIYSNLLMTSWATYSRTRLTSAA*SVR*TGIFSRKLLTAGPTSRPKRLIWRLDLTSPIVI 162
           +I  +L +   A +S T       S   TG++  +LL A       RL + + L +P+VI
Sbjct: 615 LITISLFVLGRALFSLTICWMIVGSASGTGVWWSRLLEAKFFQHLNRLSYAIYLLNPLVI 674

Query: 161 AAPMSLTMMLSA 126
           A   SLT   SA
Sbjct: 675 ALVYSLTSTSSA 686


>AE014297-3196|AAF56031.2|  692|Drosophila melanogaster CG31159-PA
           protein.
          Length = 692

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 177 CQI*PPNQSLRTRSWTSRQQLPREDPCL 260
           C I PP+ S +T    + +QL REDP L
Sbjct: 405 CSIEPPSVSSQTAMEQALKQLQREDPSL 432


>X07985-1|CAA30794.1| 2175|Drosophila melanogaster cut protein
           protein.
          Length = 2175

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -3

Query: 120 DGSGSLSNDVLKGKSSGSERPQDAAENAD 34
           + + S S+D  K  ++ +ERP DA+ NAD
Sbjct: 507 NNNNSQSSDNNKKLNTAAERPMDASSNAD 535


>AL138972-11|CAB72294.1| 1212|Drosophila melanogaster EG:BACR25B3.9
            protein.
          Length = 1212

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -3

Query: 177  IANSYCSS--DVTDNDVVC-EGDGSGSLSNDVLKGKSSGSERPQDAAENA 37
            +  S C +  ++ D+   C +GDG    + D  K    G + PQ + ENA
Sbjct: 1103 VCKSNCRNPLNLKDHASQCGDGDGQKDETEDADKSDDDGDDEPQTSKENA 1152


>AF132186-1|AAD34774.1| 1212|Drosophila melanogaster unknown protein.
          Length = 1212

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -3

Query: 177  IANSYCSS--DVTDNDVVC-EGDGSGSLSNDVLKGKSSGSERPQDAAENA 37
            +  S C +  ++ D+   C +GDG    + D  K    G + PQ + ENA
Sbjct: 1103 VCKSNCRNPLNLKDHASQCGDGDGQKDETEDADKSDDDGDDEPQTSKENA 1152


>AE014298-1048|AAF46264.2| 2175|Drosophila melanogaster CG11387-PA,
           isoform A protein.
          Length = 2175

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -3

Query: 120 DGSGSLSNDVLKGKSSGSERPQDAAENAD 34
           + + S S+D  K  ++ +ERP DA+ NAD
Sbjct: 507 NNNNSQSSDNNKKLNTAAERPMDASSNAD 535


>AE014298-417|AAF45793.1| 1212|Drosophila melanogaster CG8590-PA
            protein.
          Length = 1212

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -3

Query: 177  IANSYCSS--DVTDNDVVC-EGDGSGSLSNDVLKGKSSGSERPQDAAENA 37
            +  S C +  ++ D+   C +GDG    + D  K    G + PQ + ENA
Sbjct: 1103 VCKSNCRNPLNLKDHASQCGDGDGQKDETEDADKSDDDGDDEPQTSKENA 1152


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,748,158
Number of Sequences: 53049
Number of extensions: 311041
Number of successful extensions: 1248
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)