Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b11f
         (401 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82275-3|CAL44962.1|  478|Caenorhabditis elegans Hypothetical pr...    28   2.2  
Z82265-8|CAB05169.2|  478|Caenorhabditis elegans Hypothetical pr...    28   2.2  
U21308-15|AAB93316.2|  412|Caenorhabditis elegans Hypothetical p...    27   3.8  
U41034-4|AAY43995.1|  385|Caenorhabditis elegans Hypothetical pr...    27   5.0  
U37429-9|AAA79344.3|  796|Caenorhabditis elegans Hypothetical pr...    27   6.7  
AF038608-17|AAC25822.2|  425|Caenorhabditis elegans Hypothetical...    26   8.8  
AC024791-18|AAT81180.1|  438|Caenorhabditis elegans Hypothetical...    26   8.8  
AC024791-16|AAF60674.3|  468|Caenorhabditis elegans Hypothetical...    26   8.8  
AC024791-15|ABQ13056.1|  464|Caenorhabditis elegans Hypothetical...    26   8.8  

>Z82275-3|CAL44962.1|  478|Caenorhabditis elegans Hypothetical
           protein F02H6.2 protein.
          Length = 478

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = -3

Query: 264 QVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEG 121
           Q +RD   EV+D    F  EE+D EV  D    +   +  D D   EG
Sbjct: 28  QAERDGWNEVIDNVGEFEDEEVDEEV--DEEEDHAEDEERDTDDEVEG 73


>Z82265-8|CAB05169.2|  478|Caenorhabditis elegans Hypothetical
           protein F02H6.2 protein.
          Length = 478

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = -3

Query: 264 QVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEG 121
           Q +RD   EV+D    F  EE+D EV  D    +   +  D D   EG
Sbjct: 28  QAERDGWNEVIDNVGEFEDEEVDEEV--DEEEDHAEDEERDTDDEVEG 73


>U21308-15|AAB93316.2|  412|Caenorhabditis elegans Hypothetical
           protein ZK1290.10 protein.
          Length = 412

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = -1

Query: 191 RLDLTSPIVIAAPMSLTMM-LSARETEAVASATTFSRASPPEAK 63
           RLD T P+  A P+ L ++ ++ +E +  AS T+   A+PP A+
Sbjct: 59  RLDNTIPVPPALPIGLPIIQITTKEPQPPASLTSLP-AAPPSAQ 101


>U41034-4|AAY43995.1|  385|Caenorhabditis elegans Hypothetical
           protein M02D8.7 protein.
          Length = 385

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 215 SRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETE 114
           S PK  I R++  SP+V  AP+ +  +L    TE
Sbjct: 330 SDPKTYIARIEALSPVVRMAPLRILDILERTRTE 363


>U37429-9|AAA79344.3|  796|Caenorhabditis elegans Hypothetical
           protein F09E5.5 protein.
          Length = 796

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 196 INLFGREVGPAVNNFLEKIPVYLTDYAAEVSRVLEYVAQLV 318
           INL  +E       + +    Y TDY AE S+  E+ + ++
Sbjct: 459 INLTIQEFNELAGKYRDAFTAYKTDYFAERSKYQEFTSNII 499


>AF038608-17|AAC25822.2|  425|Caenorhabditis elegans Hypothetical
           protein C09G12.9 protein.
          Length = 425

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 318 HQQITVNYSND-TCESKINYVLLKLLKKK 401
           H+QI +NY+ D TC+  I Y L + LKK+
Sbjct: 362 HRQIVLNYAKDLTCDDVI-YSLGQSLKKR 389


>AC024791-18|AAT81180.1|  438|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19b protein.
          Length = 438

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 157 AAITIGDVKSNLQINLFGREVGPAVNNFLEKIPVYL 264
           AAI       NL +N  GRE  P + N+L+ I +Y+
Sbjct: 158 AAIHTASYFINLIVN--GREEDPQIQNYLDNIVLYI 191


>AC024791-16|AAF60674.3|  468|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19a protein.
          Length = 468

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 157 AAITIGDVKSNLQINLFGREVGPAVNNFLEKIPVYL 264
           AAI       NL +N  GRE  P + N+L+ I +Y+
Sbjct: 158 AAIHTASYFINLIVN--GREEDPQIQNYLDNIVLYI 191


>AC024791-15|ABQ13056.1|  464|Caenorhabditis elegans Hypothetical
           protein Y47G6A.19c protein.
          Length = 464

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 157 AAITIGDVKSNLQINLFGREVGPAVNNFLEKIPVYL 264
           AAI       NL +N  GRE  P + N+L+ I +Y+
Sbjct: 158 AAIHTASYFINLIVN--GREEDPQIQNYLDNIVLYI 191


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,000,379
Number of Sequences: 27780
Number of extensions: 153435
Number of successful extensions: 531
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)