BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b11f (401 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical pr... 28 2.2 Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical pr... 28 2.2 U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical p... 27 3.8 U41034-4|AAY43995.1| 385|Caenorhabditis elegans Hypothetical pr... 27 5.0 U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical pr... 27 6.7 AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 26 8.8 AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical... 26 8.8 AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical... 26 8.8 AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical... 26 8.8 >Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical protein F02H6.2 protein. Length = 478 Score = 28.3 bits (60), Expect = 2.2 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = -3 Query: 264 QVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEG 121 Q +RD EV+D F EE+D EV D + + D D EG Sbjct: 28 QAERDGWNEVIDNVGEFEDEEVDEEV--DEEEDHAEDEERDTDDEVEG 73 >Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical protein F02H6.2 protein. Length = 478 Score = 28.3 bits (60), Expect = 2.2 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = -3 Query: 264 QVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEG 121 Q +RD EV+D F EE+D EV D + + D D EG Sbjct: 28 QAERDGWNEVIDNVGEFEDEEVDEEV--DEEEDHAEDEERDTDDEVEG 73 >U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical protein ZK1290.10 protein. Length = 412 Score = 27.5 bits (58), Expect = 3.8 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = -1 Query: 191 RLDLTSPIVIAAPMSLTMM-LSARETEAVASATTFSRASPPEAK 63 RLD T P+ A P+ L ++ ++ +E + AS T+ A+PP A+ Sbjct: 59 RLDNTIPVPPALPIGLPIIQITTKEPQPPASLTSLP-AAPPSAQ 101 >U41034-4|AAY43995.1| 385|Caenorhabditis elegans Hypothetical protein M02D8.7 protein. Length = 385 Score = 27.1 bits (57), Expect = 5.0 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 215 SRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETE 114 S PK I R++ SP+V AP+ + +L TE Sbjct: 330 SDPKTYIARIEALSPVVRMAPLRILDILERTRTE 363 >U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical protein F09E5.5 protein. Length = 796 Score = 26.6 bits (56), Expect = 6.7 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = +1 Query: 196 INLFGREVGPAVNNFLEKIPVYLTDYAAEVSRVLEYVAQLV 318 INL +E + + Y TDY AE S+ E+ + ++ Sbjct: 459 INLTIQEFNELAGKYRDAFTAYKTDYFAERSKYQEFTSNII 499 >AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical protein C09G12.9 protein. Length = 425 Score = 26.2 bits (55), Expect = 8.8 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Frame = +3 Query: 318 HQQITVNYSND-TCESKINYVLLKLLKKK 401 H+QI +NY+ D TC+ I Y L + LKK+ Sbjct: 362 HRQIVLNYAKDLTCDDVI-YSLGQSLKKR 389 >AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical protein Y47G6A.19b protein. Length = 438 Score = 26.2 bits (55), Expect = 8.8 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 157 AAITIGDVKSNLQINLFGREVGPAVNNFLEKIPVYL 264 AAI NL +N GRE P + N+L+ I +Y+ Sbjct: 158 AAIHTASYFINLIVN--GREEDPQIQNYLDNIVLYI 191 >AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical protein Y47G6A.19a protein. Length = 468 Score = 26.2 bits (55), Expect = 8.8 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 157 AAITIGDVKSNLQINLFGREVGPAVNNFLEKIPVYL 264 AAI NL +N GRE P + N+L+ I +Y+ Sbjct: 158 AAIHTASYFINLIVN--GREEDPQIQNYLDNIVLYI 191 >AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical protein Y47G6A.19c protein. Length = 464 Score = 26.2 bits (55), Expect = 8.8 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 157 AAITIGDVKSNLQINLFGREVGPAVNNFLEKIPVYL 264 AAI NL +N GRE P + N+L+ I +Y+ Sbjct: 158 AAIHTASYFINLIVN--GREEDPQIQNYLDNIVLYI 191 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,000,379 Number of Sequences: 27780 Number of extensions: 153435 Number of successful extensions: 531 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 514 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 531 length of database: 12,740,198 effective HSP length: 74 effective length of database: 10,684,478 effective search space used: 630384202 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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