BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b11f (401 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 25 0.32 DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 23 1.7 AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 2.3 AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 2.3 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 3.0 AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 4.0 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 6.9 DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 20 9.2 >DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monooxygenase protein. Length = 548 Score = 25.0 bits (52), Expect = 0.32 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +3 Query: 9 ISRFR*RRNPHFQPRPEVF 65 I F+ R PH P P+VF Sbjct: 442 IGTFKLHRQPHIYPNPDVF 460 >DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. Length = 160 Score = 22.6 bits (46), Expect = 1.7 Identities = 7/18 (38%), Positives = 12/18 (66%) Frame = +3 Query: 327 ITVNYSNDTCESKINYVL 380 I N S D CE+ +N+++ Sbjct: 119 INANKSTDKCENGLNFII 136 >AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 22.2 bits (45), Expect = 2.3 Identities = 10/28 (35%), Positives = 13/28 (46%) Frame = -1 Query: 110 VASATTFSRASPPEAKDLRTRLKMRISP 27 + +T+F R PP A R L R P Sbjct: 378 IGPSTSFPRFIPPNAYRFRPPLNPRFGP 405 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 22.2 bits (45), Expect = 2.3 Identities = 8/29 (27%), Positives = 15/29 (51%) Frame = +3 Query: 288 PCSGVRRPTRHQQITVNYSNDTCESKINY 374 P ++ RH ++ + D C+ +INY Sbjct: 200 PMPTLKGDGRHMEVIKIKNFDNCDQRINY 228 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 21.8 bits (44), Expect = 3.0 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -3 Query: 126 EGDGSGSLSNDVLKGKSSGSERP 58 EG G SL + +G+ +G+E P Sbjct: 731 EGSGGDSLRTLLQRGQETGAEWP 753 >AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter transporter-1A protein. Length = 203 Score = 21.4 bits (43), Expect = 4.0 Identities = 6/6 (100%), Positives = 6/6 (100%) Frame = +3 Query: 156 SCNNYW 173 SCNNYW Sbjct: 100 SCNNYW 105 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 20.6 bits (41), Expect = 6.9 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = +3 Query: 189 PPNQSLRTRSWTSRQQLPREDP 254 PP S T S +QQLP P Sbjct: 1269 PPAYSCGTVSVPQQQQLPPSSP 1290 >DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. Length = 471 Score = 20.2 bits (40), Expect = 9.2 Identities = 7/19 (36%), Positives = 11/19 (57%) Frame = +3 Query: 105 GYRFRLPRRQHHCQ*HRSC 161 GY++ P Q H + H +C Sbjct: 311 GYKYITPLIQKHLKIHDTC 329 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 97,392 Number of Sequences: 438 Number of extensions: 1644 Number of successful extensions: 8 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 52 effective length of database: 123,567 effective search space used: 10008927 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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