BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b10r (732 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 24 5.6 AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 24 5.6 Y09952-1|CAA71083.1| 115|Anopheles gambiae histone H3 protein. 23 7.4 AY035716-1|AAK61362.1| 136|Anopheles gambiae histone 3A protein. 23 7.4 >AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase protein. Length = 1344 Score = 23.8 bits (49), Expect = 5.6 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +3 Query: 360 ILFRFSSKGGSSMTTFEGTGLAVSG 434 ++ R + GS++ F GTG VSG Sbjct: 1028 LVVRIDERHGSAVCDFTGTGPEVSG 1052 >AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein protein. Length = 541 Score = 23.8 bits (49), Expect = 5.6 Identities = 11/40 (27%), Positives = 22/40 (55%) Frame = -3 Query: 379 EENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKA 260 E+NL + + LA+ + +L ++ E + E++LKA Sbjct: 105 EQNLEMKEQNFRLAEQITRMCQLLQEEKEEAKRREEKLKA 144 >Y09952-1|CAA71083.1| 115|Anopheles gambiae histone H3 protein. Length = 115 Score = 23.4 bits (48), Expect = 7.4 Identities = 8/11 (72%), Positives = 11/11 (100%) Frame = -1 Query: 33 VFDDTNLCAIN 1 +F+DTNLCAI+ Sbjct: 102 LFEDTNLCAIH 112 >AY035716-1|AAK61362.1| 136|Anopheles gambiae histone 3A protein. Length = 136 Score = 23.4 bits (48), Expect = 7.4 Identities = 8/11 (72%), Positives = 11/11 (100%) Frame = -1 Query: 33 VFDDTNLCAIN 1 +F+DTNLCAI+ Sbjct: 104 LFEDTNLCAIH 114 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 553,677 Number of Sequences: 2352 Number of extensions: 9634 Number of successful extensions: 19 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 19 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 74844540 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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