Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b10r
         (732 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   5.6  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   5.6  
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        23   7.4  
AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      23   7.4  

>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 360  ILFRFSSKGGSSMTTFEGTGLAVSG 434
            ++ R   + GS++  F GTG  VSG
Sbjct: 1028 LVVRIDERHGSAVCDFTGTGPEVSG 1052


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -3

Query: 379 EENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKA 260
           E+NL   + +  LA+ +     +L ++ E  +  E++LKA
Sbjct: 105 EQNLEMKEQNFRLAEQITRMCQLLQEEKEEAKRREEKLKA 144


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = -1

Query: 33  VFDDTNLCAIN 1
           +F+DTNLCAI+
Sbjct: 102 LFEDTNLCAIH 112


>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 8/11 (72%), Positives = 11/11 (100%)
 Frame = -1

Query: 33  VFDDTNLCAIN 1
           +F+DTNLCAI+
Sbjct: 104 LFEDTNLCAIH 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,677
Number of Sequences: 2352
Number of extensions: 9634
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)