Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b10r
(732 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013949-1|AAH13949.1| 223|Homo sapiens coiled-coil domain cont... 127 4e-29
AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. 33 0.80
AF435977-1|AAL30810.1| 689|Homo sapiens negative regulatory ele... 33 0.80
AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein... 33 0.80
AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein... 33 0.80
AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein... 33 0.80
AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein... 33 0.80
AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein... 33 0.80
AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. 33 0.80
BT006693-1|AAP35339.1| 388|Homo sapiens SRY (sex determining re... 31 3.2
BC071947-1|AAH71947.1| 388|Homo sapiens SRY (sex determining re... 31 3.2
AK223574-1|BAD97294.1| 388|Homo sapiens SRY-box 7 variant protein. 31 3.2
AK055556-1|BAB70955.1| 388|Homo sapiens protein ( Homo sapiens ... 31 3.2
AJ409320-1|CAC84226.1| 388|Homo sapiens SOX7 protein protein. 31 3.2
L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein. 31 5.6
X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein. 30 7.4
BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein. 30 7.4
BC025962-1|AAH25962.1| 355|Homo sapiens Unknown (protein for IM... 30 7.4
BC014964-1|AAH14964.1| 355|Homo sapiens Unknown (protein for IM... 30 7.4
AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1 pro... 30 7.4
>BC013949-1|AAH13949.1| 223|Homo sapiens coiled-coil domain
containing 124 protein.
Length = 223
Score = 127 bits (307), Expect = 4e-29
Identities = 81/209 (38%), Positives = 110/209 (52%), Gaps = 8/209 (3%)
Frame = -3
Query: 730 SKAVAARQRKENAKLEKDQKTKKAVEDAEWEDNXXXXXXXXXXXXXXXXXXXXXXXXXXX 551
+K+ AAR R+ AK D K +K +EDA W+D+
Sbjct: 10 TKSAAARARRAEAKAAADAKKQKELEDAYWKDDDKHVMRKEQRKEEKEKRRLDQLERKKE 69
Query: 550 XXXXXXXXXEXXXXXXX-XXXXXXXXTRAQISQAKEK----MAKPETAKPVPSKVVIEEP 386
TRAQI + P+TA+ S + E
Sbjct: 70 TQRLLEEEDSKLKGGKAPRVATSSKVTRAQIEDTLRRDHQLREAPDTAEKAKSHL---EV 126
Query: 385 PLEENLNRIQLD-GEL-AQTVDEALAILSDKPEV-DRHPEKRLKAAFTAFEQINLPRLKA 215
PLEEN+NR L+ G + A+T+++A+A+LS E DRHPE+R++AAFTAFE+ LPRLK
Sbjct: 127 PLEENVNRRVLEEGSVEARTIEDAIAVLSVAEEAADRHPERRMRAAFTAFEEAQLPRLKQ 186
Query: 214 ENPSLRLSQLKELLKKEWHKSPQNPLNQR 128
ENP++RLSQLK+LLKKEW +SP NP+NQR
Sbjct: 187 ENPNMRLSQLKQLLKKEWLRSPDNPMNQR 215
>AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein.
Length = 2386
Score = 33.5 bits (73), Expect = 0.80
Identities = 23/96 (23%), Positives = 43/96 (44%)
Frame = -3
Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278
Q K + E+ P PSK+++ EPP+ + L + ++T E S +D
Sbjct: 271 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 330
Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170
++A + +++P A++ R +L EL K
Sbjct: 331 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366
>AF435977-1|AAL30810.1| 689|Homo sapiens negative regulatory
element-binding protein protein.
Length = 689
Score = 33.5 bits (73), Expect = 0.80
Identities = 23/96 (23%), Positives = 43/96 (44%)
Frame = -3
Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278
Q K + E+ P PSK+++ EPP+ + L + ++T E S +D
Sbjct: 271 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 330
Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170
++A + +++P A++ R +L EL K
Sbjct: 331 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366
>AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein
isoform F protein.
Length = 2426
Score = 33.5 bits (73), Expect = 0.80
Identities = 23/96 (23%), Positives = 43/96 (44%)
Frame = -3
Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278
Q K + E+ P PSK+++ EPP+ + L + ++T E S +D
Sbjct: 271 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 330
Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170
++A + +++P A++ R +L EL K
Sbjct: 331 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366
>AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein
isoform E protein.
Length = 2108
Score = 33.5 bits (73), Expect = 0.80
Identities = 23/96 (23%), Positives = 43/96 (44%)
Frame = -3
Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278
Q K + E+ P PSK+++ EPP+ + L + ++T E S +D
Sbjct: 271 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 330
Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170
++A + +++P A++ R +L EL K
Sbjct: 331 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366
>AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein
isoform C protein.
Length = 2325
Score = 33.5 bits (73), Expect = 0.80
Identities = 23/96 (23%), Positives = 43/96 (44%)
Frame = -3
Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278
Q K + E+ P PSK+++ EPP+ + L + ++T E S +D
Sbjct: 271 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 330
Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170
++A + +++P A++ R +L EL K
Sbjct: 331 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366
>AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein
isoform B protein.
Length = 2303
Score = 33.5 bits (73), Expect = 0.80
Identities = 23/96 (23%), Positives = 43/96 (44%)
Frame = -3
Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278
Q K + E+ P PSK+++ EPP+ + L + ++T E S +D
Sbjct: 271 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 330
Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170
++A + +++P A++ R +L EL K
Sbjct: 331 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366
>AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein
isoform A protein.
Length = 2140
Score = 33.5 bits (73), Expect = 0.80
Identities = 23/96 (23%), Positives = 43/96 (44%)
Frame = -3
Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278
Q K + E+ P PSK+++ EPP+ + L + ++T E S +D
Sbjct: 271 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 330
Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170
++A + +++P A++ R +L EL K
Sbjct: 331 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366
>AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein.
Length = 2309
Score = 33.5 bits (73), Expect = 0.80
Identities = 23/96 (23%), Positives = 43/96 (44%)
Frame = -3
Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278
Q K + E+ P PSK+++ EPP+ + L + ++T E S +D
Sbjct: 277 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 336
Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170
++A + +++P A++ R +L EL K
Sbjct: 337 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 372
>BT006693-1|AAP35339.1| 388|Homo sapiens SRY (sex determining
region Y)-box 7 protein.
Length = 388
Score = 31.5 bits (68), Expect = 3.2
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -3
Query: 385 PLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKA---AFTAFEQINLPRLKA 215
P E L LD EL+ D +P D+ E R++ AF + + RL
Sbjct: 9 PWPEGLECPALDAELS---DGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAV 65
Query: 214 ENPSLRLSQLKELLKKEW 161
+NP L ++L ++L K W
Sbjct: 66 QNPDLHNAELSKMLGKSW 83
>BC071947-1|AAH71947.1| 388|Homo sapiens SRY (sex determining
region Y)-box 7 protein.
Length = 388
Score = 31.5 bits (68), Expect = 3.2
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -3
Query: 385 PLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKA---AFTAFEQINLPRLKA 215
P E L LD EL+ D +P D+ E R++ AF + + RL
Sbjct: 9 PWPEGLECPALDAELS---DGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAV 65
Query: 214 ENPSLRLSQLKELLKKEW 161
+NP L ++L ++L K W
Sbjct: 66 QNPDLHNAELSKMLGKSW 83
>AK223574-1|BAD97294.1| 388|Homo sapiens SRY-box 7 variant protein.
Length = 388
Score = 31.5 bits (68), Expect = 3.2
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -3
Query: 385 PLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKA---AFTAFEQINLPRLKA 215
P E L LD EL+ D +P D+ E R++ AF + + RL
Sbjct: 9 PWPEGLKCPALDAELS---DGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAV 65
Query: 214 ENPSLRLSQLKELLKKEW 161
+NP L ++L ++L K W
Sbjct: 66 QNPDLHNAELSKMLGKSW 83
>AK055556-1|BAB70955.1| 388|Homo sapiens protein ( Homo sapiens
cDNA FLJ30994 fis, clone HLUNG1000076, highly similar to
Mus musculus mRNA for mSox7. ).
Length = 388
Score = 31.5 bits (68), Expect = 3.2
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -3
Query: 385 PLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKA---AFTAFEQINLPRLKA 215
P E L LD EL+ D +P D+ E R++ AF + + RL
Sbjct: 9 PWPEGLECPALDAELS---DGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAV 65
Query: 214 ENPSLRLSQLKELLKKEW 161
+NP L ++L ++L K W
Sbjct: 66 QNPDLHNAELSKMLGKSW 83
>AJ409320-1|CAC84226.1| 388|Homo sapiens SOX7 protein protein.
Length = 388
Score = 31.5 bits (68), Expect = 3.2
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = -3
Query: 385 PLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKA---AFTAFEQINLPRLKA 215
P E L LD EL+ D +P D+ E R++ AF + + RL
Sbjct: 9 PWPEGLECPALDAELS---DGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAV 65
Query: 214 ENPSLRLSQLKELLKKEW 161
+NP L ++L ++L K W
Sbjct: 66 QNPDLHNAELSKMLGKSW 83
>L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein.
Length = 216
Score = 30.7 bits (66), Expect = 5.6
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -3
Query: 289 DRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKS 152
D + KRL +AF F P++K E+P L + + + L + W+ +
Sbjct: 91 DPNAPKRLPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNT 136
>X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein.
Length = 1912
Score = 30.3 bits (65), Expect = 7.4
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -3
Query: 310 LSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHK-SPQNP 140
+ D V + R + AF Q P + A+NP + +S++ +L +W + S NP
Sbjct: 160 MEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNP 217
>BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein.
Length = 1937
Score = 30.3 bits (65), Expect = 7.4
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -3
Query: 310 LSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHK-SPQNP 140
+ D V + R + AF Q P + A+NP + +S++ +L +W + S NP
Sbjct: 157 MEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNP 214
>BC025962-1|AAH25962.1| 355|Homo sapiens Unknown (protein for
IMAGE:5018055) protein.
Length = 355
Score = 30.3 bits (65), Expect = 7.4
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -3
Query: 310 LSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHK-SPQNP 140
+ D V + R + AF Q P + A+NP + +S++ +L +W + S NP
Sbjct: 160 MEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNP 217
>BC014964-1|AAH14964.1| 355|Homo sapiens Unknown (protein for
IMAGE:4907274) protein.
Length = 355
Score = 30.3 bits (65), Expect = 7.4
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -3
Query: 310 LSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHK-SPQNP 140
+ D V + R + AF Q P + A+NP + +S++ +L +W + S NP
Sbjct: 160 MEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNP 217
>AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1
protein.
Length = 191
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -3
Query: 289 DRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKS 152
D + KR +AF F P++K E+P L +S + + L + W+ +
Sbjct: 91 DSNAPKRPPSAFLLFCSEYCPKIKGEHPGLPISDVAKKLVEMWNNT 136
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,067,865
Number of Sequences: 237096
Number of extensions: 1349902
Number of successful extensions: 7660
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7643
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -