BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b10r (732 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC013949-1|AAH13949.1| 223|Homo sapiens coiled-coil domain cont... 127 4e-29 AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. 33 0.80 AF435977-1|AAL30810.1| 689|Homo sapiens negative regulatory ele... 33 0.80 AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein... 33 0.80 AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein... 33 0.80 AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein... 33 0.80 AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein... 33 0.80 AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein... 33 0.80 AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. 33 0.80 BT006693-1|AAP35339.1| 388|Homo sapiens SRY (sex determining re... 31 3.2 BC071947-1|AAH71947.1| 388|Homo sapiens SRY (sex determining re... 31 3.2 AK223574-1|BAD97294.1| 388|Homo sapiens SRY-box 7 variant protein. 31 3.2 AK055556-1|BAB70955.1| 388|Homo sapiens protein ( Homo sapiens ... 31 3.2 AJ409320-1|CAC84226.1| 388|Homo sapiens SOX7 protein protein. 31 3.2 L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein. 31 5.6 X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein. 30 7.4 BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein. 30 7.4 BC025962-1|AAH25962.1| 355|Homo sapiens Unknown (protein for IM... 30 7.4 BC014964-1|AAH14964.1| 355|Homo sapiens Unknown (protein for IM... 30 7.4 AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1 pro... 30 7.4 >BC013949-1|AAH13949.1| 223|Homo sapiens coiled-coil domain containing 124 protein. Length = 223 Score = 127 bits (307), Expect = 4e-29 Identities = 81/209 (38%), Positives = 110/209 (52%), Gaps = 8/209 (3%) Frame = -3 Query: 730 SKAVAARQRKENAKLEKDQKTKKAVEDAEWEDNXXXXXXXXXXXXXXXXXXXXXXXXXXX 551 +K+ AAR R+ AK D K +K +EDA W+D+ Sbjct: 10 TKSAAARARRAEAKAAADAKKQKELEDAYWKDDDKHVMRKEQRKEEKEKRRLDQLERKKE 69 Query: 550 XXXXXXXXXEXXXXXXX-XXXXXXXXTRAQISQAKEK----MAKPETAKPVPSKVVIEEP 386 TRAQI + P+TA+ S + E Sbjct: 70 TQRLLEEEDSKLKGGKAPRVATSSKVTRAQIEDTLRRDHQLREAPDTAEKAKSHL---EV 126 Query: 385 PLEENLNRIQLD-GEL-AQTVDEALAILSDKPEV-DRHPEKRLKAAFTAFEQINLPRLKA 215 PLEEN+NR L+ G + A+T+++A+A+LS E DRHPE+R++AAFTAFE+ LPRLK Sbjct: 127 PLEENVNRRVLEEGSVEARTIEDAIAVLSVAEEAADRHPERRMRAAFTAFEEAQLPRLKQ 186 Query: 214 ENPSLRLSQLKELLKKEWHKSPQNPLNQR 128 ENP++RLSQLK+LLKKEW +SP NP+NQR Sbjct: 187 ENPNMRLSQLKQLLKKEWLRSPDNPMNQR 215 >AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. Length = 2386 Score = 33.5 bits (73), Expect = 0.80 Identities = 23/96 (23%), Positives = 43/96 (44%) Frame = -3 Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278 Q K + E+ P PSK+++ EPP+ + L + ++T E S +D Sbjct: 271 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 330 Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170 ++A + +++P A++ R +L EL K Sbjct: 331 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366 >AF435977-1|AAL30810.1| 689|Homo sapiens negative regulatory element-binding protein protein. Length = 689 Score = 33.5 bits (73), Expect = 0.80 Identities = 23/96 (23%), Positives = 43/96 (44%) Frame = -3 Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278 Q K + E+ P PSK+++ EPP+ + L + ++T E S +D Sbjct: 271 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 330 Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170 ++A + +++P A++ R +L EL K Sbjct: 331 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366 >AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein isoform F protein. Length = 2426 Score = 33.5 bits (73), Expect = 0.80 Identities = 23/96 (23%), Positives = 43/96 (44%) Frame = -3 Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278 Q K + E+ P PSK+++ EPP+ + L + ++T E S +D Sbjct: 271 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 330 Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170 ++A + +++P A++ R +L EL K Sbjct: 331 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366 >AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein isoform E protein. Length = 2108 Score = 33.5 bits (73), Expect = 0.80 Identities = 23/96 (23%), Positives = 43/96 (44%) Frame = -3 Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278 Q K + E+ P PSK+++ EPP+ + L + ++T E S +D Sbjct: 271 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 330 Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170 ++A + +++P A++ R +L EL K Sbjct: 331 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366 >AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein isoform C protein. Length = 2325 Score = 33.5 bits (73), Expect = 0.80 Identities = 23/96 (23%), Positives = 43/96 (44%) Frame = -3 Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278 Q K + E+ P PSK+++ EPP+ + L + ++T E S +D Sbjct: 271 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 330 Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170 ++A + +++P A++ R +L EL K Sbjct: 331 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366 >AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein isoform B protein. Length = 2303 Score = 33.5 bits (73), Expect = 0.80 Identities = 23/96 (23%), Positives = 43/96 (44%) Frame = -3 Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278 Q K + E+ P PSK+++ EPP+ + L + ++T E S +D Sbjct: 271 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 330 Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170 ++A + +++P A++ R +L EL K Sbjct: 331 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366 >AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein isoform A protein. Length = 2140 Score = 33.5 bits (73), Expect = 0.80 Identities = 23/96 (23%), Positives = 43/96 (44%) Frame = -3 Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278 Q K + E+ P PSK+++ EPP+ + L + ++T E S +D Sbjct: 271 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 330 Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170 ++A + +++P A++ R +L EL K Sbjct: 331 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 366 >AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. Length = 2309 Score = 33.5 bits (73), Expect = 0.80 Identities = 23/96 (23%), Positives = 43/96 (44%) Frame = -3 Query: 457 QAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHP 278 Q K + E+ P PSK+++ EPP+ + L + ++T E S +D Sbjct: 277 QMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPSTSTTMDFPE 336 Query: 277 EKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLK 170 ++A + +++P A++ R +L EL K Sbjct: 337 SSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPK 372 >BT006693-1|AAP35339.1| 388|Homo sapiens SRY (sex determining region Y)-box 7 protein. Length = 388 Score = 31.5 bits (68), Expect = 3.2 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = -3 Query: 385 PLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKA---AFTAFEQINLPRLKA 215 P E L LD EL+ D +P D+ E R++ AF + + RL Sbjct: 9 PWPEGLECPALDAELS---DGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAV 65 Query: 214 ENPSLRLSQLKELLKKEW 161 +NP L ++L ++L K W Sbjct: 66 QNPDLHNAELSKMLGKSW 83 >BC071947-1|AAH71947.1| 388|Homo sapiens SRY (sex determining region Y)-box 7 protein. Length = 388 Score = 31.5 bits (68), Expect = 3.2 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = -3 Query: 385 PLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKA---AFTAFEQINLPRLKA 215 P E L LD EL+ D +P D+ E R++ AF + + RL Sbjct: 9 PWPEGLECPALDAELS---DGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAV 65 Query: 214 ENPSLRLSQLKELLKKEW 161 +NP L ++L ++L K W Sbjct: 66 QNPDLHNAELSKMLGKSW 83 >AK223574-1|BAD97294.1| 388|Homo sapiens SRY-box 7 variant protein. Length = 388 Score = 31.5 bits (68), Expect = 3.2 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = -3 Query: 385 PLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKA---AFTAFEQINLPRLKA 215 P E L LD EL+ D +P D+ E R++ AF + + RL Sbjct: 9 PWPEGLKCPALDAELS---DGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAV 65 Query: 214 ENPSLRLSQLKELLKKEW 161 +NP L ++L ++L K W Sbjct: 66 QNPDLHNAELSKMLGKSW 83 >AK055556-1|BAB70955.1| 388|Homo sapiens protein ( Homo sapiens cDNA FLJ30994 fis, clone HLUNG1000076, highly similar to Mus musculus mRNA for mSox7. ). Length = 388 Score = 31.5 bits (68), Expect = 3.2 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = -3 Query: 385 PLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKA---AFTAFEQINLPRLKA 215 P E L LD EL+ D +P D+ E R++ AF + + RL Sbjct: 9 PWPEGLECPALDAELS---DGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAV 65 Query: 214 ENPSLRLSQLKELLKKEW 161 +NP L ++L ++L K W Sbjct: 66 QNPDLHNAELSKMLGKSW 83 >AJ409320-1|CAC84226.1| 388|Homo sapiens SOX7 protein protein. Length = 388 Score = 31.5 bits (68), Expect = 3.2 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Frame = -3 Query: 385 PLEENLNRIQLDGELAQTVDEALAILSDKPEVDRHPEKRLKA---AFTAFEQINLPRLKA 215 P E L LD EL+ D +P D+ E R++ AF + + RL Sbjct: 9 PWPEGLECPALDAELS---DGQSPPAVPRPPGDKGSESRIRRPMNAFMVWAKDERKRLAV 65 Query: 214 ENPSLRLSQLKELLKKEW 161 +NP L ++L ++L K W Sbjct: 66 QNPDLHNAELSKMLGKSW 83 >L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein. Length = 216 Score = 30.7 bits (66), Expect = 5.6 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = -3 Query: 289 DRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKS 152 D + KRL +AF F P++K E+P L + + + L + W+ + Sbjct: 91 DPNAPKRLPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNT 136 >X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein. Length = 1912 Score = 30.3 bits (65), Expect = 7.4 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = -3 Query: 310 LSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHK-SPQNP 140 + D V + R + AF Q P + A+NP + +S++ +L +W + S NP Sbjct: 160 MEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNP 217 >BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein. Length = 1937 Score = 30.3 bits (65), Expect = 7.4 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = -3 Query: 310 LSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHK-SPQNP 140 + D V + R + AF Q P + A+NP + +S++ +L +W + S NP Sbjct: 157 MEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNP 214 >BC025962-1|AAH25962.1| 355|Homo sapiens Unknown (protein for IMAGE:5018055) protein. Length = 355 Score = 30.3 bits (65), Expect = 7.4 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = -3 Query: 310 LSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHK-SPQNP 140 + D V + R + AF Q P + A+NP + +S++ +L +W + S NP Sbjct: 160 MEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNP 217 >BC014964-1|AAH14964.1| 355|Homo sapiens Unknown (protein for IMAGE:4907274) protein. Length = 355 Score = 30.3 bits (65), Expect = 7.4 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = -3 Query: 310 LSDKPEVDRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHK-SPQNP 140 + D V + R + AF Q P + A+NP + +S++ +L +W + S NP Sbjct: 160 MEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNP 217 >AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1 protein. Length = 191 Score = 30.3 bits (65), Expect = 7.4 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = -3 Query: 289 DRHPEKRLKAAFTAFEQINLPRLKAENPSLRLSQLKELLKKEWHKS 152 D + KR +AF F P++K E+P L +S + + L + W+ + Sbjct: 91 DSNAPKRPPSAFLLFCSEYCPKIKGEHPGLPISDVAKKLVEMWNNT 136 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 77,067,865 Number of Sequences: 237096 Number of extensions: 1349902 Number of successful extensions: 7660 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 7360 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7643 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 8679165170 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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