Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b10f
         (604 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    27   0.16 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.5  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   4.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.0  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.0  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +2

Query: 221 SSICTKCQRNSLERIAKL*QLDSAKKMLNWKKIKKQ 328
           SS CTKC +   E   K+ +  + K+  +W+++ K+
Sbjct: 71  SSGCTKCNQKQKETAEKVIRHLTQKRARDWERLSKK 106


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = -2

Query: 174 LLLHMYISILFYYIYIHWERLYSLKLKDILFVH 76
           L    +  ILF+ IY++W++  +L    +L+ +
Sbjct: 10  LFFFSFCCILFF-IYLYWQQTSNLTTSKLLYTY 41


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 114 LYSLKLKDILFVHSCTEYL 58
           +  L LKDI+F++   +YL
Sbjct: 4   ILKLSLKDIVFINPLVKYL 22


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +2

Query: 224 SICTKCQRNSLERIAKL*QLDSAKKMLNWKKI 319
           S C KC     E   K+    S  K   WK++
Sbjct: 68  SDCAKCSEKQKEMTKKVIHFLSHNKQQMWKEL 99


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 28  ISFYLVPRTSQVFCTAVNEEYI 93
           +SF L+ +T  + C  V  E I
Sbjct: 606 VSFLLITQTIFIICVIVQSEQI 627


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 6/35 (17%), Positives = 21/35 (60%)
 Frame = -2

Query: 162 MYISILFYYIYIHWERLYSLKLKDILFVHSCTEYL 58
           +++ ++ Y  +I W+++  ++ ++  F  +  +YL
Sbjct: 100 VFVVVMGYIGFIEWDKVEIVRSQEGRFEEAVIDYL 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,207
Number of Sequences: 336
Number of extensions: 2230
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)