Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b08f
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   2.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.4  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   6.4  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 394 DNSNDGGPEFAEV 432
           DNSN+GG  FA V
Sbjct: 238 DNSNEGGEGFATV 250


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +3

Query: 495 HFILPIGVRSRLLFVPGGPRAHHLPHHTVQCAEHLP 602
           HF+  I +   L+   G    +    H  +C  HLP
Sbjct: 672 HFLFHIVIGMNLIIHVGTQLIYRPFSHFPRCGNHLP 707


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -1

Query: 291 NEDMVEFVSDSSEVSHKSLFDRFIQCVKLHVVSTG 187
           NE+    V D    SHK   D  +   +  ++S G
Sbjct: 147 NEETKRLVEDLEAESHKPYIDVVVPITQFTLLSIG 181


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 124 CRISSQTYSFQYYLF 80
           C++++  Y FQ +LF
Sbjct: 225 CQVANSIYGFQNFLF 239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,972
Number of Sequences: 336
Number of extensions: 3616
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)