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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b08f
         (630 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1467 + 37570289-37570771,37571818-37571892,37572006-37572266     88   5e-18
05_04_0443 - 21283680-21283940,21284044-21284118,21284620-212846...    85   3e-17
05_03_0316 + 12242823-12242964,12243032-12243282,12243370-122435...    31   0.75 
06_01_1202 + 10389090-10389140,10389218-10389853,10390355-103904...    31   1.00 
11_04_0122 + 13689847-13690704                                         29   4.0  
04_01_0246 + 3225743-3226473,3226493-3226624,3227580-3227670,322...    28   5.3  
12_01_0428 + 3374519-3375423,3376663-3376742,3377206-3377217,337...    28   7.0  
07_03_1348 + 25945444-25945551,25946411-25946607,25946732-259468...    28   7.0  
05_06_0132 + 25893241-25893435,25894266-25894487,25894567-258948...    28   7.0  
03_06_0680 - 35497868-35497884,35498058-35501961                       28   7.0  
11_06_0418 - 23317077-23317343,23317614-23317787,23317886-233179...    27   9.3  
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281...    27   9.3  
02_02_0565 + 11550071-11550909,11551603-11553133,11553205-11553537     27   9.3  

>01_06_1467 + 37570289-37570771,37571818-37571892,37572006-37572266
          Length = 272

 Score = 88.2 bits (209), Expect = 5e-18
 Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
 Frame = +1

Query: 211 NTLDEPIKETFMRDLRAVGNKFYHVLIPR----EKTSLLKEWDLWGPLLLCTLMATILQG 378
           NTL EP+ +T  RDL  + +    V+ P     +    L++WDLWGP      +   L  
Sbjct: 96  NTLTEPVWDTVKRDLARIVSNLKLVVFPNPYREDPGKALRDWDLWGPFFFIVFLGLTLSW 155

Query: 379 SAERADNSNDGGPEFAEVFVIVWIGAAVVTINSKLLGGNISFFQSVCVLGYCLFPVALAL 558
           SA     S      FA  F ++  GA ++T+N  LLGG+I FFQS+ +LGYCLFP+ +  
Sbjct: 156 SA-----SVKKSEVFAVAFAVLAAGAIILTLNVLLLGGHIIFFQSLSLLGYCLFPLDVGA 210

Query: 559 IICRI 573
           ++C +
Sbjct: 211 LVCML 215


>05_04_0443 -
           21283680-21283940,21284044-21284118,21284620-21284649,
           21286744-21287247
          Length = 289

 Score = 85.4 bits (202), Expect = 3e-17
 Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
 Frame = +1

Query: 211 NTLDEPIKETFMRDLRAVGNKFYHVLIPR----EKTSLLKEWDLWGPLLLCTLMATILQG 378
           NTL EP+ +T  RDL  + +    V+ P     +    L++WDLWGP      +   L  
Sbjct: 103 NTLTEPVLDTVKRDLARIVSNLKLVVFPNPFREDPGKALRDWDLWGPFFFIVFLGLTLSW 162

Query: 379 SAE-----RADNSNDGGPEFAEVFVIVWIGAAVVTINSKLLGGNISFFQSVCVLGYCLFP 543
           SA                 FA  F ++  GA ++T+N  LLGG I+FFQS+ +LGYCLFP
Sbjct: 163 SASVKKIIMFTRFLCKSEVFAVAFAVLAAGAIILTLNVLLLGGRINFFQSLSLLGYCLFP 222

Query: 544 VALALIICRIILFSAQNTFLFFLRLVISM 630
           + +  +IC +      N  L  + +V+++
Sbjct: 223 LDVGALICML----KDNVLLKIIAVVVTL 247


>05_03_0316 +
           12242823-12242964,12243032-12243282,12243370-12243573,
           12243660-12243752,12243828-12243926,12244006-12244308
          Length = 363

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -1

Query: 588 RTEQYDAADDEREGHREQTVAENAHRLEE*NVSTQQFRVDSYNCSPD 448
           R+++    D    G + Q +  N H +EE N++  ++R + Y   PD
Sbjct: 4   RSQRLQGLDFSENGVQNQEMVPNDHYVEEQNITNAEWRSNCYEYHPD 50


>06_01_1202 +
           10389090-10389140,10389218-10389853,10390355-10390439,
           10390536-10390654,10391251-10391318,10391401-10391710
          Length = 422

 Score = 30.7 bits (66), Expect = 1.00
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = +1

Query: 187 SSGDNMEFNTLDEPIKETFMRDLRAVGNKFYHVLIPREKTSLLKEWDLWG-PLLLCTLMA 363
           S G N + +  D+ I E   +D    G K  HV+  +EKT + +EW ++G P        
Sbjct: 235 SRGLNFDLDRSDDFIAEVTDKD---PGGK-RHVVDLKEKTCICREWQVYGKPCAHALCFI 290

Query: 364 TILQGSAERADNSNDGGPE 420
           T ++G   R  +++D G E
Sbjct: 291 TSIRGVQCRWWDNSDSGLE 309


>11_04_0122 + 13689847-13690704
          Length = 285

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = -2

Query: 476 ELIVTTAAPIQTITNTSANSGPPSLELSALSAEPWRIVAIRVQRSNGPHR 327
           E++V     ++ +   +A++   SL+   LS  PWR     + +  GP+R
Sbjct: 192 EVLVARPDDVRKVVRAAASAARRSLKRRRLSVPPWRKRKFMIAKWLGPYR 241


>04_01_0246 +
           3225743-3226473,3226493-3226624,3227580-3227670,
           3228617-3229074,3229342-3229864
          Length = 644

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +1

Query: 97  MNTFDSKYDMYPAGD-VGVIEGEMNIPGRGPSSGDNMEFNTLDE 225
           ++++ S+    P+G   G+I G+ N  G GP     +EF+T D+
Sbjct: 133 LSSYPSRVPPKPSGQSFGLIAGDANDAGDGPDRFVAVEFDTYDD 176


>12_01_0428 +
           3374519-3375423,3376663-3376742,3377206-3377217,
           3377337-3377379,3378304-3380332
          Length = 1022

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 558 HHLPHHTVQCAEHLPILPE 614
           +HLPHH   C  +L I PE
Sbjct: 495 NHLPHHLKACMMYLSIFPE 513


>07_03_1348 +
           25945444-25945551,25946411-25946607,25946732-25946804,
           25947003-25947092,25947410-25947465,25947559-25947738,
           25947813-25948006,25948095-25948234,25948324-25948466,
           25948549-25948697,25948784-25949148,25949264-25949368
          Length = 599

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 218 WMNRSKRLLCETSELSETNSTMSSFREK 301
           W      LLCE SEL+   S  SS R++
Sbjct: 116 WSREEDLLLCEISELANMRSVTSSVRQQ 143


>05_06_0132 +
           25893241-25893435,25894266-25894487,25894567-25894863,
           25894944-25895111,25895201-25895368,25895456-25895536,
           25895704-25895770,25895874-25895971,25896587-25896659,
           25896753-25896823,25896919-25896968,25897698-25897810,
           25898182-25898300,25898629-25898721,25899025-25899051,
           25899422-25899823,25900467-25900513,25900612-25900651,
           25900733-25900795,25900881-25901018,25901873-25902031,
           25902111-25902164,25902324-25902392,25902514-25902643,
           25902909-25902949,25903133-25903178,25903200-25903357,
           25903560-25903605,25903702-25903853,25904022-25904243
          Length = 1202

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 209 NSMLSPLDGPRPGIFISPSI 150
           +S L PLD P PG+ ISP +
Sbjct: 94  SSQLPPLDVPLPGVIISPPL 113


>03_06_0680 - 35497868-35497884,35498058-35501961
          Length = 1306

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = -2

Query: 608 KNRKVFCALNSMMRQMMSARATGNKQ*PRTHTDW-KNEMFPPSSLELIVTTAAPIQTITN 432
           K+ K+ C ++ +M  +  A+++  K+     T   K+E FP S+  L ++     + I N
Sbjct: 490 KDSKITCKIHDLMHDV--AQSSMGKECAAIATKLSKSEDFPSSARHLFLS-GYRAEAILN 546

Query: 431 TSANSGPPSLELSALSAE 378
           TS   G P ++    S++
Sbjct: 547 TSLEKGHPGIQTLICSSQ 564


>11_06_0418 -
           23317077-23317343,23317614-23317787,23317886-23317971,
           23318125-23318244,23318338-23318368,23318457-23318532,
           23318672-23318759,23318877-23318938,23319041-23319117,
           23319890-23319992,23320237-23320298,23321116-23321289,
           23322160-23322405
          Length = 521

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 358 MATILQGSAERA-DNSNDGGPEFAEVFVIVWIGAAVVTINS 477
           M  +  GS+E   DN+N+ GPE    +  V++G     +NS
Sbjct: 338 MIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNS 378


>10_01_0266 +
           2816391-2818898,2818934-2819162,2819369-2819444,
           2819776-2819830,2822042-2822110,2823077-2823321,
           2824029-2824065
          Length = 1072

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 193 HWMALGQVYSFPPQLLPHLPLDTCRISSQTYSFQYYLFT-N*IKCESY 53
           +WM +  + S+P +LL +  +     +  TYS   +  T + I+C  Y
Sbjct: 841 YWMIIEMLNSYPRELLDNFQVMDSSAAGVTYSLLCFFMTDSAIRCNGY 888


>02_02_0565 + 11550071-11550909,11551603-11553133,11553205-11553537
          Length = 900

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 558 HHLPHHTVQCAEHLPILPE 614
           +HLPHH   C  +L I PE
Sbjct: 432 NHLPHHLKACMLYLSIFPE 450


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,785,178
Number of Sequences: 37544
Number of extensions: 426270
Number of successful extensions: 1323
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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