BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b08f (630 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 27 0.37 AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 26 0.86 AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 26 0.86 AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 26 0.86 AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 26 1.1 AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 25 1.5 AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 25 2.0 AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 2.0 AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 23 6.1 AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 23 6.1 AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 23 8.0 >AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. Length = 334 Score = 27.5 bits (58), Expect = 0.37 Identities = 14/48 (29%), Positives = 19/48 (39%) Frame = -2 Query: 548 ATGNKQ*PRTHTDWKNEMFPPSSLELIVTTAAPIQTITNTSANSGPPS 405 AT P T T W ++ PP + P TIT + PP+ Sbjct: 227 ATTTTHAPTTTTTWSDQPPPPPTTTTTTVWTDPTTTITTDYTTAYPPT 274 Score = 25.8 bits (54), Expect = 1.1 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Frame = -2 Query: 527 PRTHTDWKNEMFPPSSLELIV------TTAAPIQTITNTSANSGPP 408 P T T W ++ PP++ V TT P T T T ++ PP Sbjct: 168 PTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTTTTWSDLPPP 213 >AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. Length = 334 Score = 26.2 bits (55), Expect = 0.86 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Frame = -2 Query: 527 PRTHTDWKNEMFPPSSLELIV------TTAAPIQTITNTSANSGPP 408 P T T W ++ PP++ V TT P T T T ++ PP Sbjct: 168 PTTTTTWSDQPPPPTTTTTTVWTDSTATTTTPASTTTTTWSDLPPP 213 Score = 23.4 bits (48), Expect = 6.1 Identities = 13/48 (27%), Positives = 17/48 (35%) Frame = -2 Query: 548 ATGNKQ*PRTHTDWKNEMFPPSSLELIVTTAAPIQTITNTSANSGPPS 405 AT P T T W + PP + P T T + PP+ Sbjct: 227 ATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPT 274 >AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. Length = 333 Score = 26.2 bits (55), Expect = 0.86 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Frame = -2 Query: 527 PRTHTDWKNEMFPPSSLELIV------TTAAPIQTITNTSANSGPP 408 P T T W ++ PP++ V TT P T T T ++ PP Sbjct: 167 PTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTTTTWSDLPPP 212 Score = 23.4 bits (48), Expect = 6.1 Identities = 13/48 (27%), Positives = 17/48 (35%) Frame = -2 Query: 548 ATGNKQ*PRTHTDWKNEMFPPSSLELIVTTAAPIQTITNTSANSGPPS 405 AT P T T W + PP + P T T + PP+ Sbjct: 226 ATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPT 273 >AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. Length = 333 Score = 26.2 bits (55), Expect = 0.86 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Frame = -2 Query: 527 PRTHTDWKNEMFPPSSLELIV------TTAAPIQTITNTSANSGPP 408 P T T W ++ PP++ V TT P T T T ++ PP Sbjct: 167 PTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTTTTWSDLPPP 212 Score = 23.4 bits (48), Expect = 6.1 Identities = 13/48 (27%), Positives = 17/48 (35%) Frame = -2 Query: 548 ATGNKQ*PRTHTDWKNEMFPPSSLELIVTTAAPIQTITNTSANSGPPS 405 AT P T T W + PP + P T T + PP+ Sbjct: 226 ATTTTHVPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPT 273 >AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. Length = 334 Score = 25.8 bits (54), Expect = 1.1 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Frame = -2 Query: 527 PRTHTDWKNEMFPPSSLELIV------TTAAPIQTITNTSANSGPP 408 P T T W ++ PP++ V TT P T T T ++ PP Sbjct: 168 PTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTTTTWSDLPPP 213 Score = 23.4 bits (48), Expect = 6.1 Identities = 13/48 (27%), Positives = 17/48 (35%) Frame = -2 Query: 548 ATGNKQ*PRTHTDWKNEMFPPSSLELIVTTAAPIQTITNTSANSGPPS 405 AT P T T W + PP + P T T + PP+ Sbjct: 227 ATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPT 274 >AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoisomerase protein. Length = 1039 Score = 25.4 bits (53), Expect = 1.5 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -2 Query: 227 GSSNVLNSMLSPLDGPRPGIFISPSITPTSP 135 GSSN S S L+G G + + TPT+P Sbjct: 118 GSSNAALSNSSVLNGSNSGSATTTTTTPTNP 148 >AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. Length = 2259 Score = 25.0 bits (52), Expect = 2.0 Identities = 10/33 (30%), Positives = 16/33 (48%) Frame = -1 Query: 441 YHKYFSKLXXXXXXXXXSFCRALEDSGHKSAKE 343 +HKYF L F R +++GH+ +E Sbjct: 2070 FHKYFLHLSPGLQEVIDRFVRIQQENGHRITEE 2102 >AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1 chain protein. Length = 1024 Score = 25.0 bits (52), Expect = 2.0 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%) Frame = +1 Query: 115 KYDMYPAGDVG----VIEGEMNIPGRGPSSG 195 K DM P G+ G V++GE +PGR +G Sbjct: 529 KGDMGPLGEKGDACPVVKGEKGLPGRPGKTG 559 >AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. Length = 334 Score = 23.4 bits (48), Expect = 6.1 Identities = 13/48 (27%), Positives = 17/48 (35%) Frame = -2 Query: 548 ATGNKQ*PRTHTDWKNEMFPPSSLELIVTTAAPIQTITNTSANSGPPS 405 AT P T T W + PP + P T T + PP+ Sbjct: 227 ATTTTHVPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPT 274 Score = 23.0 bits (47), Expect = 8.0 Identities = 10/32 (31%), Positives = 16/32 (50%) Frame = -2 Query: 527 PRTHTDWKNEMFPPSSLELIVTTAAPIQTITN 432 P T T W ++ PP++ V T + T T+ Sbjct: 168 PTTTTTWSDQPRPPTTTTTTVWTDSTATTTTH 199 >AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein protein. Length = 373 Score = 23.4 bits (48), Expect = 6.1 Identities = 13/48 (27%), Positives = 17/48 (35%) Frame = -2 Query: 548 ATGNKQ*PRTHTDWKNEMFPPSSLELIVTTAAPIQTITNTSANSGPPS 405 AT P T T W + PP + P T T + PP+ Sbjct: 227 ATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPT 274 >AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. Length = 334 Score = 23.0 bits (47), Expect = 8.0 Identities = 13/48 (27%), Positives = 17/48 (35%) Frame = -2 Query: 548 ATGNKQ*PRTHTDWKNEMFPPSSLELIVTTAAPIQTITNTSANSGPPS 405 AT P T T W + PP + P T T + PP+ Sbjct: 227 ATTTTHVPPTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYPPT 274 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 724,550 Number of Sequences: 2352 Number of extensions: 15018 Number of successful extensions: 66 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 66 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 61468785 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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