BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b08f (630 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 1.9 AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 23 3.2 AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 23 3.2 AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 23 3.2 DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 5.7 DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 5.7 AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 5.7 AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 5.7 AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 9.9 >AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor protein. Length = 501 Score = 23.4 bits (48), Expect = 1.9 Identities = 8/19 (42%), Positives = 14/19 (73%) Frame = +1 Query: 439 IVWIGAAVVTINSKLLGGN 495 +VW+GAA +++ L+ GN Sbjct: 164 LVWLGAACISLPPLLIMGN 182 >AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone esterase protein. Length = 567 Score = 22.6 bits (46), Expect = 3.2 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = +2 Query: 443 FGSGLQL*LSTLNCWVETFHS 505 F G+ + + LNCW +T +S Sbjct: 228 FQGGISISGTALNCWTQTENS 248 >AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. Length = 169 Score = 22.6 bits (46), Expect = 3.2 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = +2 Query: 443 FGSGLQL*LSTLNCWVETFHS 505 F G+ + + LNCW +T +S Sbjct: 99 FQGGISISGTALNCWTQTENS 119 >AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. Length = 567 Score = 22.6 bits (46), Expect = 3.2 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = +2 Query: 443 FGSGLQL*LSTLNCWVETFHS 505 F G+ + + LNCW +T +S Sbjct: 228 FQGGISISGTALNCWTQTENS 248 >DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 21.8 bits (44), Expect = 5.7 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = -1 Query: 147 SHISRWIHVVFRVKRIHFNIIYLRIE*NVSLIV 49 S I ++ +VF V + FN++Y I ++S +V Sbjct: 402 SDIDKYSRIVFPVCFVCFNLMYWIIYLHISDVV 434 >DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 21.8 bits (44), Expect = 5.7 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = -1 Query: 147 SHISRWIHVVFRVKRIHFNIIYLRIE*NVSLIV 49 S I ++ +VF V + FN++Y I ++S +V Sbjct: 402 SDIDKYSRIVFPVCFVCFNLMYWIIYLHISDVV 434 >AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A isoform protein. Length = 567 Score = 21.8 bits (44), Expect = 5.7 Identities = 8/23 (34%), Positives = 12/23 (52%) Frame = +3 Query: 306 QSFKRMGPVGAVTPLHSYGHYPP 374 +S G G +TP+ YG+ P Sbjct: 308 ESLSTSGSSGILTPVSPYGYVKP 330 >AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. Length = 554 Score = 21.8 bits (44), Expect = 5.7 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +3 Query: 546 GPRAHHLPHHTVQCAEHL 599 GP HH HH Q +HL Sbjct: 348 GPPHHH-HHHQTQSLQHL 364 >AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. Length = 652 Score = 21.0 bits (42), Expect = 9.9 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -2 Query: 425 ANSGPPSLELSALSAEP 375 + GPPS+ LS+ EP Sbjct: 126 SRDGPPSVSLSSPPREP 142 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 193,586 Number of Sequences: 438 Number of extensions: 4722 Number of successful extensions: 10 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 18826962 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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