BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b07r (781 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 36 0.001 AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 33 0.013 AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 27 0.65 AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR ... 26 1.5 AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 25 3.5 DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein. 23 8.0 >AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1 chain precursor protein. Length = 801 Score = 36.3 bits (80), Expect = 0.001 Identities = 31/108 (28%), Positives = 37/108 (34%), Gaps = 5/108 (4%) Frame = -1 Query: 310 GREDGAVARAGTGAPHP--GQEGERAPAARGRLQGEAHVRLLRG-EAASGLPAREVERGA 140 G G R G P G EG + P GE R G + G+P R G Sbjct: 401 GAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDGFDGEKGERGQMGPKGGQGVPGRPGPEGM 460 Query: 139 PSRPEAHGRLDSEQRD--QGDHSGPGEAGPGPLHRGPGFAGQEVNGSE 2 P G S QG PG+ GP L PG G + G + Sbjct: 461 PGDKGDKGESGSVGMPGPQGPRGYPGQPGPEGLRGEPGQPGYGIPGQK 508 Score = 32.3 bits (70), Expect = 0.017 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 8/93 (8%) Frame = -1 Query: 274 GAPH-PGQEGERAPAARGRLQGEAHVRLLRGEAAS-------GLPAREVERGAPSRPEAH 119 GAP PG++GE+ R L G R L+GE G+ + ERG P Sbjct: 544 GAPGLPGRDGEKGEPGRPGLPGAKGERGLKGELGGRCTDCRPGMKGDKGERGYAGEPGRP 603 Query: 118 GRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQ 20 G ++G PGE G L PG G+ Sbjct: 604 G-ASGVPGERGYPGMPGEDGTPGLRGEPGPKGE 635 Score = 31.9 bits (69), Expect = 0.023 Identities = 39/119 (32%), Positives = 50/119 (42%), Gaps = 7/119 (5%) Frame = -1 Query: 343 PNRESTGGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAA-SGL 167 P + T G RG E G G P PG GE A + ++ +GE +GL Sbjct: 618 PGEDGTPGL-RG-EPGPKGEPGLLGP-PGPSGEPGRDAEIPMDQLKPIKGDKGEKGENGL 674 Query: 166 PAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG----PG-PLHRG-PGFAGQEVNG 8 + E+G P G++ +GD PGEAG PG P G PG GQ V G Sbjct: 675 MGIKGEKGFPGPVGPEGKMGLRGM-KGDKGRPGEAGIDGAPGAPGKDGLPGRHGQTVKG 732 Score = 30.7 bits (66), Expect = 0.053 Identities = 23/68 (33%), Positives = 31/68 (45%) Frame = -1 Query: 262 PGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGD 83 PGQ+G A L+G+ R +G + A+E GAP P GR D E+ + G Sbjct: 505 PGQKGNAGMAGFPGLKGQKGERGFKGVMGTPGDAKEGRPGAPGLP---GR-DGEKGEPGR 560 Query: 82 HSGPGEAG 59 PG G Sbjct: 561 PGLPGAKG 568 Score = 23.8 bits (49), Expect = 6.1 Identities = 25/93 (26%), Positives = 33/93 (35%), Gaps = 4/93 (4%) Frame = -1 Query: 325 GGRNRGREDGAVARAGTGAPHPGQ--EGERAPAARGRLQGEAHVRLLRGEAAS-GLPARE 155 G R G G A HP +G++ L+G + GE G P R Sbjct: 199 GPRGYAGIPGTKGEKGEPARHPENYNKGQKGEPGNDGLEGLPGPQ---GEVGPRGFPGRP 255 Query: 154 VERGAPSRPEAHG-RLDSEQRDQGDHSGPGEAG 59 E+G P P G R D +G+ G G Sbjct: 256 GEKGVPGTPGVRGERGDKGVCIKGEKGQKGAKG 288 >AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1 chain protein. Length = 1024 Score = 32.7 bits (71), Expect = 0.013 Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 7/101 (6%) Frame = -1 Query: 301 DGAVARAGTGAPHPGQEGERA----PAARGR--LQGEAHVRLLRGEAASGLPAREVERGA 140 DG AG P G +GE+ P G L GE L G GL R+ +RG Sbjct: 405 DGLPGAAGPVGPR-GYDGEKGFKGEPGRIGERGLMGEKGDMGLTGPV--GLSGRKGDRGV 461 Query: 139 PSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHRGPGFAGQ 20 P P + + + D+G+ PG G PG + PG +G+ Sbjct: 462 PGSPGLPATVAAIKGDKGEPGFPGAIGRPGKV-GVPGLSGE 501 Score = 29.5 bits (63), Expect = 0.12 Identities = 23/80 (28%), Positives = 33/80 (41%) Frame = -1 Query: 259 GQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDH 80 G++G+R L G + +GE P R +G P P +G +GD Sbjct: 681 GEKGDRGLPGMSGLNGAPGEKGQKGETPQLPPQR---KGPPGPPGFNG-------PKGDK 730 Query: 79 SGPGEAGPGPLHRGPGFAGQ 20 PG AGP + PG G+ Sbjct: 731 GLPGLAGPAGIPGAPGAPGE 750 Score = 27.5 bits (58), Expect = 0.49 Identities = 29/96 (30%), Positives = 36/96 (37%) Frame = -1 Query: 343 PNRESTGGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGLP 164 P R GR+ G + G P G P+ QGE R G+ SGL Sbjct: 552 PGRPGKTGRD-GPPGLTGEKGEPGLPVWKDRGPSGPSGPLGPQGEKGDR---GD--SGLM 605 Query: 163 AREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGP 56 R G P P+ L Q ++GD PG GP Sbjct: 606 GRPGNDGLPG-PQGQRGLPGPQGEKGDQGPPGFIGP 640 Score = 25.8 bits (54), Expect = 1.5 Identities = 20/64 (31%), Positives = 23/64 (35%) Frame = -1 Query: 259 GQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDH 80 G G PA L G GE P + E+G P RP GR D G+ Sbjct: 512 GLPGLPGPAGLNGLPGMKGDMGPLGEKGDACPVVKGEKGLPGRPGKTGR-DGPPGLTGEK 570 Query: 79 SGPG 68 PG Sbjct: 571 GEPG 574 >AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein protein. Length = 429 Score = 27.1 bits (57), Expect = 0.65 Identities = 16/65 (24%), Positives = 31/65 (47%) Frame = -2 Query: 237 LQLEAAYRERLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQA 58 LQ A + M+ S+ +R +L ++ + QK V +SN+ +A + ++Q Sbjct: 304 LQASAGVTKVSMWQLSDGTKRARVRLPAKAAKQLVGQKLTVSCCISNIKEAPAINLQQQR 363 Query: 57 LDRCI 43 RC+ Sbjct: 364 CYRCL 368 >AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR protein. Length = 640 Score = 25.8 bits (54), Expect = 1.5 Identities = 13/36 (36%), Positives = 16/36 (44%) Frame = +1 Query: 454 QSGVIFVLHYIDFLAAQVCCQTHTKSVRTRHTSFRV 561 +SG I VLH + L CC HT R+ V Sbjct: 575 RSGFILVLHGVPGLQQLCCCIRHTPPAIARNVGSSV 610 >AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein protein. Length = 3325 Score = 24.6 bits (51), Expect = 3.5 Identities = 20/49 (40%), Positives = 21/49 (42%) Frame = -1 Query: 280 GTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPS 134 G G G G AP A G + G A V SGLPA GAPS Sbjct: 3200 GAGLAMVGAGGSTAPGAGG-VPGVAVV------PGSGLPAAAASGGAPS 3241 >DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein. Length = 595 Score = 23.4 bits (48), Expect = 8.0 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = -2 Query: 237 LQLEAAYRERLMYAYSEVKRRLDYQLEKSNVER 139 + L YR + M YS + LD++L+ S R Sbjct: 170 IPLSDTYRNQSMTYYSSEVQSLDFELDTSGSTR 202 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 808,997 Number of Sequences: 2352 Number of extensions: 16938 Number of successful extensions: 43 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 42 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 81497388 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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