Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b06r
(679 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC004548-1|AAH04548.2| 441|Homo sapiens hypothetical protein PR... 162 9e-40
AC007390-2|AAY14816.1| 441|Homo sapiens unknown protein. 162 9e-40
BX538031-1|CAD97976.1| 343|Homo sapiens hypothetical protein pr... 132 1e-30
BC012374-1|AAH12374.1| 99|Homo sapiens PRO1853 protein protein. 49 1e-05
AL353637-4|CAH70683.1| 432|Homo sapiens forkhead box B2 protein. 33 1.2
U34605-1|AAA84934.1| 482|Homo sapiens retinoic acid- and interf... 30 8.7
CR457031-1|CAG33312.1| 482|Homo sapiens IFIT5 protein. 30 8.7
BC025786-1|AAH25786.1| 482|Homo sapiens interferon-induced prot... 30 8.7
AL353146-3|CAI12381.1| 482|Homo sapiens interferon-induced prot... 30 8.7
>BC004548-1|AAH04548.2| 441|Homo sapiens hypothetical protein
PRO1853 protein.
Length = 441
Score = 162 bits (394), Expect = 9e-40
Identities = 88/211 (41%), Positives = 124/211 (58%), Gaps = 2/211 (0%)
Frame = -1
Query: 679 FSWYVAHEFFDVLPIHKFEKTEKGWRELLIDIDD--TGKLLYRLSGNETQAVKMLIRPPL 506
+S+Y+AHEFFDVLP+HKF+KT +GWRE+ +DID + KL + L+ + T A +
Sbjct: 209 YSFYLAHEFFDVLPVHKFQKTPQGWREVFVDIDPQVSDKLRFVLAPSATPAEAFIQHDET 268
Query: 505 DSGDRTELEISARSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRAFQKHQVVDPLE 326
R +E+ + + +L++R+ GG AL+ADYGH+G K DTFR F H++ D L
Sbjct: 269 ----RDHVEVCPDAGVIIEELSQRIALTGGAALVADYGHDGTKTDTFRGFCDHKLHDVLI 324
Query: 325 TPGKSDLTADVDFSQLRIAASKTPGEENYALVVGPVKQKDFLEQCQGELRLQVLXXXXXX 146
PG +DLTADVDFS LR A + +GP+KQ FL+ ++RL+VL
Sbjct: 325 APGTADLTADVDFSYLRRMA------QGKVASLGPIKQHTFLKNMGIDVRLKVLLDKSNE 378
Query: 145 XXXXXXXKSAYEMLVDPNKMGERFKFMAFYP 53
Y+ML++P KMGERF F A P
Sbjct: 379 PSVRQQLLQGYDMLMNPKKMGERFNFFALLP 409
>AC007390-2|AAY14816.1| 441|Homo sapiens unknown protein.
Length = 441
Score = 162 bits (394), Expect = 9e-40
Identities = 88/211 (41%), Positives = 124/211 (58%), Gaps = 2/211 (0%)
Frame = -1
Query: 679 FSWYVAHEFFDVLPIHKFEKTEKGWRELLIDIDD--TGKLLYRLSGNETQAVKMLIRPPL 506
+S+Y+AHEFFDVLP+HKF+KT +GWRE+ +DID + KL + L+ + T A +
Sbjct: 209 YSFYLAHEFFDVLPVHKFQKTPQGWREVFVDIDPQVSDKLRFVLAPSATPAEAFIQHDET 268
Query: 505 DSGDRTELEISARSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRAFQKHQVVDPLE 326
R +E+ + + +L++R+ GG AL+ADYGH+G K DTFR F H++ D L
Sbjct: 269 ----RDHVEVCPDAGVIIEELSQRIALTGGAALVADYGHDGTKTDTFRGFCDHKLHDVLI 324
Query: 325 TPGKSDLTADVDFSQLRIAASKTPGEENYALVVGPVKQKDFLEQCQGELRLQVLXXXXXX 146
PG +DLTADVDFS LR A + +GP+KQ FL+ ++RL+VL
Sbjct: 325 APGTADLTADVDFSYLRRMA------QGKVASLGPIKQHTFLKNMGIDVRLKVLLDKSNE 378
Query: 145 XXXXXXXKSAYEMLVDPNKMGERFKFMAFYP 53
Y+ML++P KMGERF F A P
Sbjct: 379 PSVRQQLLQGYDMLMNPKKMGERFNFFALLP 409
>BX538031-1|CAD97976.1| 343|Homo sapiens hypothetical protein
protein.
Length = 343
Score = 132 bits (318), Expect = 1e-30
Identities = 76/199 (38%), Positives = 109/199 (54%), Gaps = 2/199 (1%)
Frame = -1
Query: 643 LPIHKFEKTEKGWRELLIDIDD--TGKLLYRLSGNETQAVKMLIRPPLDSGDRTELEISA 470
+ +H EKT +GWRE+ +DID + KL + L+ + T A + R +E+
Sbjct: 123 ISVHLVEKTPQGWREVFVDIDPQVSDKLRFVLAPSATPAEAFIQHDET----RDHVEVCP 178
Query: 469 RSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRAFQKHQVVDPLETPGKSDLTADVD 290
+ + +L++R+ GG AL+ADYGH+G K DTFR F H++ D L PG +DLTADVD
Sbjct: 179 DAGVIIEELSQRIALTGGAALVADYGHDGTKTDTFRGFCDHKLHDVLIAPGTADLTADVD 238
Query: 289 FSQLRIAASKTPGEENYALVVGPVKQKDFLEQCQGELRLQVLXXXXXXXXXXXXXKSAYE 110
FS LR A + +GP+KQ FL+ ++RL+VL Y+
Sbjct: 239 FSYLRRMA------QGKVASLGPIKQHTFLKNMGIDVRLKVLLDKSNEPSVRQQLLQGYD 292
Query: 109 MLVDPNKMGERFKFMAFYP 53
ML++P KMGERF F A P
Sbjct: 293 MLMNPKKMGERFNFFALLP 311
>BC012374-1|AAH12374.1| 99|Homo sapiens PRO1853 protein protein.
Length = 99
Score = 49.2 bits (112), Expect = 1e-05
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = -1
Query: 229 VGPVKQKDFLEQCQGELRLQVLXXXXXXXXXXXXXKSAYEMLVDPNKMGERFKFMAFYP 53
+GP+KQ FL+ ++RL+VL Y+ML++P KMGERF F A P
Sbjct: 9 LGPIKQHTFLKNMGIDVRLKVLLDKSNEPSVRQQLLQGYDMLMNPKKMGERFNFFALLP 67
>AL353637-4|CAH70683.1| 432|Homo sapiens forkhead box B2 protein.
Length = 432
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 369 VSPFSPSCP*SAMSAKPPCSSTLLASCRATPKLLALISNSVLSPESKGGRI 521
VS P A S +PP ST+ ++ A+P L + S ESKGG +
Sbjct: 375 VSALQPGLTVPAASQQPPAPSTVCSAAAASPVASLLEPTAPTSAESKGGSL 425
>U34605-1|AAA84934.1| 482|Homo sapiens retinoic acid- and
interferon-inducible 58K protein RI58 protein.
Length = 482
Score = 29.9 bits (64), Expect = 8.7
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = -1
Query: 538 QAVKMLIRPPLDSGDRTELEISARSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRA 359
+A+K+ R PL RT+L + + L R +D AL Y EGEK
Sbjct: 402 EALKVKDRSPL----RTKLTSALKKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEY 457
Query: 358 FQKHQVVDP 332
++K Q +DP
Sbjct: 458 YEKAQKIDP 466
>CR457031-1|CAG33312.1| 482|Homo sapiens IFIT5 protein.
Length = 482
Score = 29.9 bits (64), Expect = 8.7
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = -1
Query: 538 QAVKMLIRPPLDSGDRTELEISARSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRA 359
+A+K+ R PL RT+L + + L R +D AL Y EGEK
Sbjct: 402 EALKVKDRSPL----RTKLTSALKKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEY 457
Query: 358 FQKHQVVDP 332
++K Q +DP
Sbjct: 458 YEKAQKIDP 466
>BC025786-1|AAH25786.1| 482|Homo sapiens interferon-induced protein
with tetratricopeptide repeats 5 protein.
Length = 482
Score = 29.9 bits (64), Expect = 8.7
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = -1
Query: 538 QAVKMLIRPPLDSGDRTELEISARSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRA 359
+A+K+ R PL RT+L + + L R +D AL Y EGEK
Sbjct: 402 EALKVKDRSPL----RTKLTSALKKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEY 457
Query: 358 FQKHQVVDP 332
++K Q +DP
Sbjct: 458 YEKAQKIDP 466
>AL353146-3|CAI12381.1| 482|Homo sapiens interferon-induced protein
with tetratricopeptide0,959 beta subunit precursor)
protein.
Length = 482
Score = 29.9 bits (64), Expect = 8.7
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = -1
Query: 538 QAVKMLIRPPLDSGDRTELEISARSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRA 359
+A+K+ R PL RT+L + + L R +D AL Y EGEK
Sbjct: 402 EALKVKDRSPL----RTKLTSALKKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEY 457
Query: 358 FQKHQVVDP 332
++K Q +DP
Sbjct: 458 YEKAQKIDP 466
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,050,019
Number of Sequences: 237096
Number of extensions: 1773937
Number of successful extensions: 3761
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3755
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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