BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b06r (679 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC004548-1|AAH04548.2| 441|Homo sapiens hypothetical protein PR... 162 9e-40 AC007390-2|AAY14816.1| 441|Homo sapiens unknown protein. 162 9e-40 BX538031-1|CAD97976.1| 343|Homo sapiens hypothetical protein pr... 132 1e-30 BC012374-1|AAH12374.1| 99|Homo sapiens PRO1853 protein protein. 49 1e-05 AL353637-4|CAH70683.1| 432|Homo sapiens forkhead box B2 protein. 33 1.2 U34605-1|AAA84934.1| 482|Homo sapiens retinoic acid- and interf... 30 8.7 CR457031-1|CAG33312.1| 482|Homo sapiens IFIT5 protein. 30 8.7 BC025786-1|AAH25786.1| 482|Homo sapiens interferon-induced prot... 30 8.7 AL353146-3|CAI12381.1| 482|Homo sapiens interferon-induced prot... 30 8.7 >BC004548-1|AAH04548.2| 441|Homo sapiens hypothetical protein PRO1853 protein. Length = 441 Score = 162 bits (394), Expect = 9e-40 Identities = 88/211 (41%), Positives = 124/211 (58%), Gaps = 2/211 (0%) Frame = -1 Query: 679 FSWYVAHEFFDVLPIHKFEKTEKGWRELLIDIDD--TGKLLYRLSGNETQAVKMLIRPPL 506 +S+Y+AHEFFDVLP+HKF+KT +GWRE+ +DID + KL + L+ + T A + Sbjct: 209 YSFYLAHEFFDVLPVHKFQKTPQGWREVFVDIDPQVSDKLRFVLAPSATPAEAFIQHDET 268 Query: 505 DSGDRTELEISARSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRAFQKHQVVDPLE 326 R +E+ + + +L++R+ GG AL+ADYGH+G K DTFR F H++ D L Sbjct: 269 ----RDHVEVCPDAGVIIEELSQRIALTGGAALVADYGHDGTKTDTFRGFCDHKLHDVLI 324 Query: 325 TPGKSDLTADVDFSQLRIAASKTPGEENYALVVGPVKQKDFLEQCQGELRLQVLXXXXXX 146 PG +DLTADVDFS LR A + +GP+KQ FL+ ++RL+VL Sbjct: 325 APGTADLTADVDFSYLRRMA------QGKVASLGPIKQHTFLKNMGIDVRLKVLLDKSNE 378 Query: 145 XXXXXXXKSAYEMLVDPNKMGERFKFMAFYP 53 Y+ML++P KMGERF F A P Sbjct: 379 PSVRQQLLQGYDMLMNPKKMGERFNFFALLP 409 >AC007390-2|AAY14816.1| 441|Homo sapiens unknown protein. Length = 441 Score = 162 bits (394), Expect = 9e-40 Identities = 88/211 (41%), Positives = 124/211 (58%), Gaps = 2/211 (0%) Frame = -1 Query: 679 FSWYVAHEFFDVLPIHKFEKTEKGWRELLIDIDD--TGKLLYRLSGNETQAVKMLIRPPL 506 +S+Y+AHEFFDVLP+HKF+KT +GWRE+ +DID + KL + L+ + T A + Sbjct: 209 YSFYLAHEFFDVLPVHKFQKTPQGWREVFVDIDPQVSDKLRFVLAPSATPAEAFIQHDET 268 Query: 505 DSGDRTELEISARSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRAFQKHQVVDPLE 326 R +E+ + + +L++R+ GG AL+ADYGH+G K DTFR F H++ D L Sbjct: 269 ----RDHVEVCPDAGVIIEELSQRIALTGGAALVADYGHDGTKTDTFRGFCDHKLHDVLI 324 Query: 325 TPGKSDLTADVDFSQLRIAASKTPGEENYALVVGPVKQKDFLEQCQGELRLQVLXXXXXX 146 PG +DLTADVDFS LR A + +GP+KQ FL+ ++RL+VL Sbjct: 325 APGTADLTADVDFSYLRRMA------QGKVASLGPIKQHTFLKNMGIDVRLKVLLDKSNE 378 Query: 145 XXXXXXXKSAYEMLVDPNKMGERFKFMAFYP 53 Y+ML++P KMGERF F A P Sbjct: 379 PSVRQQLLQGYDMLMNPKKMGERFNFFALLP 409 >BX538031-1|CAD97976.1| 343|Homo sapiens hypothetical protein protein. Length = 343 Score = 132 bits (318), Expect = 1e-30 Identities = 76/199 (38%), Positives = 109/199 (54%), Gaps = 2/199 (1%) Frame = -1 Query: 643 LPIHKFEKTEKGWRELLIDIDD--TGKLLYRLSGNETQAVKMLIRPPLDSGDRTELEISA 470 + +H EKT +GWRE+ +DID + KL + L+ + T A + R +E+ Sbjct: 123 ISVHLVEKTPQGWREVFVDIDPQVSDKLRFVLAPSATPAEAFIQHDET----RDHVEVCP 178 Query: 469 RSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRAFQKHQVVDPLETPGKSDLTADVD 290 + + +L++R+ GG AL+ADYGH+G K DTFR F H++ D L PG +DLTADVD Sbjct: 179 DAGVIIEELSQRIALTGGAALVADYGHDGTKTDTFRGFCDHKLHDVLIAPGTADLTADVD 238 Query: 289 FSQLRIAASKTPGEENYALVVGPVKQKDFLEQCQGELRLQVLXXXXXXXXXXXXXKSAYE 110 FS LR A + +GP+KQ FL+ ++RL+VL Y+ Sbjct: 239 FSYLRRMA------QGKVASLGPIKQHTFLKNMGIDVRLKVLLDKSNEPSVRQQLLQGYD 292 Query: 109 MLVDPNKMGERFKFMAFYP 53 ML++P KMGERF F A P Sbjct: 293 MLMNPKKMGERFNFFALLP 311 >BC012374-1|AAH12374.1| 99|Homo sapiens PRO1853 protein protein. Length = 99 Score = 49.2 bits (112), Expect = 1e-05 Identities = 23/59 (38%), Positives = 32/59 (54%) Frame = -1 Query: 229 VGPVKQKDFLEQCQGELRLQVLXXXXXXXXXXXXXKSAYEMLVDPNKMGERFKFMAFYP 53 +GP+KQ FL+ ++RL+VL Y+ML++P KMGERF F A P Sbjct: 9 LGPIKQHTFLKNMGIDVRLKVLLDKSNEPSVRQQLLQGYDMLMNPKKMGERFNFFALLP 67 >AL353637-4|CAH70683.1| 432|Homo sapiens forkhead box B2 protein. Length = 432 Score = 32.7 bits (71), Expect = 1.2 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = +3 Query: 369 VSPFSPSCP*SAMSAKPPCSSTLLASCRATPKLLALISNSVLSPESKGGRI 521 VS P A S +PP ST+ ++ A+P L + S ESKGG + Sbjct: 375 VSALQPGLTVPAASQQPPAPSTVCSAAAASPVASLLEPTAPTSAESKGGSL 425 >U34605-1|AAA84934.1| 482|Homo sapiens retinoic acid- and interferon-inducible 58K protein RI58 protein. Length = 482 Score = 29.9 bits (64), Expect = 8.7 Identities = 22/69 (31%), Positives = 32/69 (46%) Frame = -1 Query: 538 QAVKMLIRPPLDSGDRTELEISARSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRA 359 +A+K+ R PL RT+L + + L R +D AL Y EGEK Sbjct: 402 EALKVKDRSPL----RTKLTSALKKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEY 457 Query: 358 FQKHQVVDP 332 ++K Q +DP Sbjct: 458 YEKAQKIDP 466 >CR457031-1|CAG33312.1| 482|Homo sapiens IFIT5 protein. Length = 482 Score = 29.9 bits (64), Expect = 8.7 Identities = 22/69 (31%), Positives = 32/69 (46%) Frame = -1 Query: 538 QAVKMLIRPPLDSGDRTELEISARSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRA 359 +A+K+ R PL RT+L + + L R +D AL Y EGEK Sbjct: 402 EALKVKDRSPL----RTKLTSALKKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEY 457 Query: 358 FQKHQVVDP 332 ++K Q +DP Sbjct: 458 YEKAQKIDP 466 >BC025786-1|AAH25786.1| 482|Homo sapiens interferon-induced protein with tetratricopeptide repeats 5 protein. Length = 482 Score = 29.9 bits (64), Expect = 8.7 Identities = 22/69 (31%), Positives = 32/69 (46%) Frame = -1 Query: 538 QAVKMLIRPPLDSGDRTELEISARSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRA 359 +A+K+ R PL RT+L + + L R +D AL Y EGEK Sbjct: 402 EALKVKDRSPL----RTKLTSALKKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEY 457 Query: 358 FQKHQVVDP 332 ++K Q +DP Sbjct: 458 YEKAQKIDP 466 >AL353146-3|CAI12381.1| 482|Homo sapiens interferon-induced protein with tetratricopeptide0,959 beta subunit precursor) protein. Length = 482 Score = 29.9 bits (64), Expect = 8.7 Identities = 22/69 (31%), Positives = 32/69 (46%) Frame = -1 Query: 538 QAVKMLIRPPLDSGDRTELEISARSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRA 359 +A+K+ R PL RT+L + + L R +D AL Y EGEK Sbjct: 402 EALKVKDRSPL----RTKLTSALKKLSTKRLCHNALDVQSLSALGFVYKLEGEKRQAAEY 457 Query: 358 FQKHQVVDP 332 ++K Q +DP Sbjct: 458 YEKAQKIDP 466 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 95,050,019 Number of Sequences: 237096 Number of extensions: 1773937 Number of successful extensions: 3761 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3630 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3755 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 7671262118 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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