Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b06r
(679 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47357-10|CAA87427.3| 426|Caenorhabditis elegans Hypothetical p... 131 4e-31
AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ... 31 0.57
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 31 0.57
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 31 0.57
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ... 31 0.57
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 31 0.57
AC006603-6|ABB51200.1| 534|Caenorhabditis elegans Hypothetical ... 31 1.00
Z72508-7|CAA96642.1| 336|Caenorhabditis elegans Hypothetical pr... 27 9.3
L15314-4|AAF99988.2| 618|Caenorhabditis elegans Hypothetical pr... 27 9.3
AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z47357-10|CAA87427.3| 426|Caenorhabditis elegans Hypothetical
protein ZK1128.1 protein.
Length = 426
Score = 131 bits (317), Expect = 4e-31
Identities = 79/227 (34%), Positives = 116/227 (51%), Gaps = 3/227 (1%)
Frame = -1
Query: 679 FSWYVAHEFFDVLPIHKFEKTEKGWRELLIDIDDTGKLLYRLSGNETQAVKMLIRPPL-D 503
F+ ++ +EF D LPIH+F K+ W E+ +++ G L + S E K LI + D
Sbjct: 199 FTVFIGNEFLDALPIHQFHKSGDSWNEVYVNLTKDGDLCFMKSKGENLHTKGLIPSAIRD 258
Query: 502 SGDRTELEISARSLGVARQLAKRVDEHGGLALIADYGHEGEKG-DTFRAFQKHQVVDPLE 326
R E S S V Q+ R+ GG +L+ DYGH+G + +FRA++ H+ VD LE
Sbjct: 259 DSSRVTWECSPESGTVVNQIVDRITTFGGFSLLVDYGHDGSRNTHSFRAYKNHKQVDTLE 318
Query: 325 TPGKSDLTADVDFSQLRIAASKTPGEENYALVVGPVKQKDFLEQCQGELRLQVLXXXXXX 146
PG +DLTADVDF L ++ ++ GP +Q++FL Q E RL+ L
Sbjct: 319 NPGLADLTADVDFGYLSTLV------KDRVVIYGPNEQREFLAQLGIEHRLRRLLQVCKD 372
Query: 145 XXXXXXXKSAYEMLVDPNKMGERFKFMAFYPSTMASIL-TKYPPLGF 8
+Y ML+ MG +FK A +P T+ IL + P GF
Sbjct: 373 RKQQEQLIESYNMLM--GDMGLKFKAWALFPKTLEFILEQRGGPAGF 417
>AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
protein F33H12.6 protein.
Length = 1360
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 172 AALIPLGIVLKNLFALLVQQLVHSSLHQESLKRLYEVVRS 291
A L+PLG +LF L ++ SSLHQ LK E+ +
Sbjct: 979 ANLLPLGRTSASLFKLDIRNQCKSSLHQRQLKEAQELAEN 1018
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 172 AALIPLGIVLKNLFALLVQQLVHSSLHQESLKRLYEVVRS 291
A L+PLG +LF L ++ SSLHQ LK E+ +
Sbjct: 1085 ANLLPLGRTSASLFKLDIRNQCKSSLHQRQLKEAQELAEN 1124
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 172 AALIPLGIVLKNLFALLVQQLVHSSLHQESLKRLYEVVRS 291
A L+PLG +LF L ++ SSLHQ LK E+ +
Sbjct: 1085 ANLLPLGRTSASLFKLDIRNQCKSSLHQRQLKEAQELAEN 1124
>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
protein Y46B2A.2 protein.
Length = 1365
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 172 AALIPLGIVLKNLFALLVQQLVHSSLHQESLKRLYEVVRS 291
A L+PLG +LF L ++ SSLHQ LK E+ +
Sbjct: 984 ANLLPLGRTSASLFKLDIRNQCKSSLHQRQLKEAQELAEN 1023
>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
protein F59H6.5 protein.
Length = 1486
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 172 AALIPLGIVLKNLFALLVQQLVHSSLHQESLKRLYEVVRS 291
A L+PLG +LF L ++ SSLHQ LK E+ +
Sbjct: 1105 ANLLPLGRTSASLFKLDIRNQCKSSLHQRQLKEAQELAEN 1144
>AC006603-6|ABB51200.1| 534|Caenorhabditis elegans Hypothetical
protein B0524.1 protein.
Length = 534
Score = 30.7 bits (66), Expect = 1.00
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Frame = -1
Query: 640 PIHKFEKTEKGWRELLIDI----DDTGKLLY-RLSGNETQAVKMLIRPPLDSGDRTELEI 476
P+ K EKT K WR++ + + T K Y R + Q RP + L+I
Sbjct: 176 PVKKREKTAKNWRKIAVLVCFKRKTTTKNRYLRRPKTKNQRKIEFRRPKTSKNRKLRLKI 235
Query: 475 SARSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRAFQKHQ 344
R + R+L +R + + + EK + R FQ+ Q
Sbjct: 236 RPRVRFIDRKLIRRRECLVDPQNLISWIRRQEKAENLRIFQEKQ 279
>Z72508-7|CAA96642.1| 336|Caenorhabditis elegans Hypothetical
protein F28H7.11 protein.
Length = 336
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 451 VLHPSFLH*FLTLFCH 498
+LH FL+ ++TLFCH
Sbjct: 105 ILHAHFLYRYMTLFCH 120
>L15314-4|AAF99988.2| 618|Caenorhabditis elegans Hypothetical
protein K06H7.3 protein.
Length = 618
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1
Query: 505 DSGDRTE-LEISARSLGVARQLAKRVDEHGGLALIADYGHEGEKGDTFRAFQKHQV 341
+S R E LE+ + +AR++A + + GG+ +I ++ + E D + + H +
Sbjct: 317 ESDFRAEMLEVREKRKKLARKVAGKKRKDGGMQMICEWSDDDENEDISKEKKTHHI 372
>AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical
protein Y51F10.4 protein.
Length = 598
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -1
Query: 586 IDDTGKLLYRLSGNETQAVKMLIRPPLDSGDRTELEISARSLGVARQLAKR 434
+DD +L + GN+T+AVKML+ + + + E+ R + QL K+
Sbjct: 500 LDDISELAAK--GNDTEAVKMLVE--MKEQQKIQQELIVRQEQIVAQLNKK 546
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,726,778
Number of Sequences: 27780
Number of extensions: 274757
Number of successful extensions: 746
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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