Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b06f
         (655 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC004548-1|AAH04548.2|  441|Homo sapiens hypothetical protein PR...    95   3e-19
AC007390-2|AAY14816.1|  441|Homo sapiens unknown protein.              95   3e-19
BX538031-1|CAD97976.1|  343|Homo sapiens hypothetical protein pr...    35   0.29 

>BC004548-1|AAH04548.2|  441|Homo sapiens hypothetical protein
           PRO1853 protein.
          Length = 441

 Score = 94.7 bits (225), Expect = 3e-19
 Identities = 41/74 (55%), Positives = 54/74 (72%)
 Frame = +1

Query: 364 PTPESAPNLIEIIKEKIRLNGPITVAEYMHIVTTNPTEGYYMKKEVIGEAGDFITSPEIS 543
           P       ++  +  KI+  GPITVAEYM  V TNP +GYY+ ++++GE GDFITSPEIS
Sbjct: 35  PAENPVTPMLRHLMYKIKSTGPITVAEYMKEVLTNPAKGYYVYRDMLGEKGDFITSPEIS 94

Query: 544 QLFGEILGIWFYAE 585
           Q+FGE+LGIWF +E
Sbjct: 95  QIFGELLGIWFISE 108


>AC007390-2|AAY14816.1|  441|Homo sapiens unknown protein.
          Length = 441

 Score = 94.7 bits (225), Expect = 3e-19
 Identities = 41/74 (55%), Positives = 54/74 (72%)
 Frame = +1

Query: 364 PTPESAPNLIEIIKEKIRLNGPITVAEYMHIVTTNPTEGYYMKKEVIGEAGDFITSPEIS 543
           P       ++  +  KI+  GPITVAEYM  V TNP +GYY+ ++++GE GDFITSPEIS
Sbjct: 35  PAENPVTPMLRHLMYKIKSTGPITVAEYMKEVLTNPAKGYYVYRDMLGEKGDFITSPEIS 94

Query: 544 QLFGEILGIWFYAE 585
           Q+FGE+LGIWF +E
Sbjct: 95  QIFGELLGIWFISE 108


>BX538031-1|CAD97976.1|  343|Homo sapiens hypothetical protein
           protein.
          Length = 343

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 364 PTPESAPNLIEIIKEKIRLNGPITVAEYMHIVTTNPTE 477
           P       ++  +  KI+  GPITVAEYM  V TNP +
Sbjct: 35  PAENPVTPMLRHLMYKIKSTGPITVAEYMKEVLTNPAK 72


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,803,918
Number of Sequences: 237096
Number of extensions: 1300299
Number of successful extensions: 6109
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6100
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)