Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b06f
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012337-1|AAS77462.1|  437|Drosophila melanogaster AT11512p pro...    99   5e-21
AE014297-1268|AAF54614.1|  437|Drosophila melanogaster CG17726-P...    99   5e-21
AY060921-1|AAL28469.1|  406|Drosophila melanogaster GM06493p pro...    91   9e-19
AY113468-1|AAM29473.1|  366|Drosophila melanogaster RE41779p pro...    73   3e-13
BT021252-1|AAX33400.1|  553|Drosophila melanogaster RE60459p pro...    29   4.2  
AE014297-2215|AAN13711.1|  698|Drosophila melanogaster CG14897-P...    29   4.2  
AE014297-2214|AAF55320.1| 1298|Drosophila melanogaster CG14897-P...    29   4.2  

>BT012337-1|AAS77462.1|  437|Drosophila melanogaster AT11512p
           protein.
          Length = 437

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 14/109 (12%)
 Frame = +1

Query: 310 REYSYKTIKRPD---PRTLKMPTPESAP-----------NLIEIIKEKIRLNGPITVAEY 447
           R YSYK+++RP+     T KM  P+  P           +L + ++ KI   GPI VAEY
Sbjct: 12  RWYSYKSVRRPNLGATGTPKMEPPKEQPEASSKAESGHGSLAKQLRAKILSTGPIPVAEY 71

Query: 448 MHIVTTNPTEGYYMKKEVIGEAGDFITSPEISQLFGEILGIWFYAEHRK 594
           M  V TNP  GYYM ++V G  GDFITSPEISQ+FGE++GIW  +E RK
Sbjct: 72  MREVLTNPQAGYYMNRDVFGREGDFITSPEISQIFGELVGIWLVSEWRK 120


>AE014297-1268|AAF54614.1|  437|Drosophila melanogaster CG17726-PA
           protein.
          Length = 437

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 14/109 (12%)
 Frame = +1

Query: 310 REYSYKTIKRPD---PRTLKMPTPESAP-----------NLIEIIKEKIRLNGPITVAEY 447
           R YSYK+++RP+     T KM  P+  P           +L + ++ KI   GPI VAEY
Sbjct: 12  RWYSYKSVRRPNLGATGTPKMEPPKEQPEASSKAESGHGSLAKQLRAKILSTGPIPVAEY 71

Query: 448 MHIVTTNPTEGYYMKKEVIGEAGDFITSPEISQLFGEILGIWFYAEHRK 594
           M  V TNP  GYYM ++V G  GDFITSPEISQ+FGE++GIW  +E RK
Sbjct: 72  MREVLTNPQAGYYMNRDVFGREGDFITSPEISQIFGELVGIWLVSEWRK 120


>AY060921-1|AAL28469.1|  406|Drosophila melanogaster GM06493p
           protein.
          Length = 406

 Score = 91.5 bits (217), Expect = 9e-19
 Identities = 41/70 (58%), Positives = 51/70 (72%)
 Frame = +1

Query: 385 NLIEIIKEKIRLNGPITVAEYMHIVTTNPTEGYYMKKEVIGEAGDFITSPEISQLFGEIL 564
           +L + ++ KI   GPI VAEYM  V TNP  GYYM ++V G  GDFITSPEISQ+FGE++
Sbjct: 20  SLAKQLRAKILSTGPIPVAEYMREVLTNPQAGYYMNRDVFGREGDFITSPEISQIFGELV 79

Query: 565 GIWFYAEHRK 594
           GIW  +E RK
Sbjct: 80  GIWLVSEWRK 89


>AY113468-1|AAM29473.1|  366|Drosophila melanogaster RE41779p
           protein.
          Length = 366

 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = +1

Query: 448 MHIVTTNPTEGYYMKKEVIGEAGDFITSPEISQLFGEILGIWFYAEHRK 594
           M  V TNP  GYYM ++V G  GDFITSPEISQ+FGE++GIW  +E RK
Sbjct: 1   MREVLTNPQAGYYMNRDVFGREGDFITSPEISQIFGELVGIWLVSEWRK 49


>BT021252-1|AAX33400.1|  553|Drosophila melanogaster RE60459p
           protein.
          Length = 553

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 259 SRILLNMCKYDSPRFLTREYSYKTIKRPDPRTLKMPTPESAPN--LIEIIKEKIRLNGP 429
           S +++++   D+P   +    YKT KRP   T    TP+S     L+  IK++I  N P
Sbjct: 346 SPLVIDITNSDTPPSASPSQRYKTPKRPAGITTPNRTPQSLMKRALLTSIKKQIASNQP 404


>AE014297-2215|AAN13711.1|  698|Drosophila melanogaster CG14897-PA,
           isoform A protein.
          Length = 698

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 259 SRILLNMCKYDSPRFLTREYSYKTIKRPDPRTLKMPTPESAPN--LIEIIKEKIRLNGP 429
           S +++++   D+P   +    YKT KRP   T    TP+S     L+  IK++I  N P
Sbjct: 346 SPLVIDITNSDTPPSASPSQRYKTPKRPAGITTPNRTPQSLMKRALLTSIKKQIASNQP 404


>AE014297-2214|AAF55320.1| 1298|Drosophila melanogaster CG14897-PB,
           isoform B protein.
          Length = 1298

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 259 SRILLNMCKYDSPRFLTREYSYKTIKRPDPRTLKMPTPESAPN--LIEIIKEKIRLNGP 429
           S +++++   D+P   +    YKT KRP   T    TP+S     L+  IK++I  N P
Sbjct: 346 SPLVIDITNSDTPPSASPSQRYKTPKRPAGITTPNRTPQSLMKRALLTSIKKQIASNQP 404


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,858,580
Number of Sequences: 53049
Number of extensions: 395951
Number of successful extensions: 1001
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)