Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b06f
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47357-10|CAA87427.3|  426|Caenorhabditis elegans Hypothetical p...    83   2e-16
AC024757-5|AAK68430.1|  814|Caenorhabditis elegans Hypothetical ...    31   0.94 

>Z47357-10|CAA87427.3|  426|Caenorhabditis elegans Hypothetical
           protein ZK1128.1 protein.
          Length = 426

 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 42/96 (43%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
 Frame = +1

Query: 310 REYSYKTIKRPDPRTLKMPTPESAPNLIEIIKEKIRLNGPITVAEYMHIVTTNPTEGYYM 489
           R+YS + +K P        +PE   +L + + +KIR++GPITVAEYM    + P  GYY 
Sbjct: 14  RQYSKQILKPPG-----YASPEKTNHLKKFLVDKIRVSGPITVAEYMKTCVSAPLVGYYG 68

Query: 490 K----KEVIGEAGDFITSPEISQLFGEILGIWFYAE 585
           +    ++V G  GDFITSPE++QLFGE++G+W + E
Sbjct: 69  QFSKDQKVFGAKGDFITSPELTQLFGEMIGVWVFHE 104


>AC024757-5|AAK68430.1|  814|Caenorhabditis elegans Hypothetical
           protein Y37E11AL.8 protein.
          Length = 814

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 325 KTIKRPDPRTLKMPTPESAPNLIEIIKEKIRLNGPITVA 441
           K +++ DP  +K+  P   P+L ++I+    L G +T A
Sbjct: 75  KCVEKQDPAEIKVSAPRPTPSLDDVIERSPELLGSLTTA 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,780,919
Number of Sequences: 27780
Number of extensions: 219259
Number of successful extensions: 685
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)