Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b06f
(655 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 1.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 1.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 1.5
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 24 1.5
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 3.4
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 6.0
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 6.0
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 7.9
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 7.9
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 7.9
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.8 bits (49), Expect = 1.5
Identities = 6/14 (42%), Positives = 14/14 (100%)
Frame = -3
Query: 278 IFSNILEFICVHFI 237
I++++LEF+CV+++
Sbjct: 374 IYASLLEFVCVNYV 387
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.8 bits (49), Expect = 1.5
Identities = 6/14 (42%), Positives = 14/14 (100%)
Frame = -3
Query: 278 IFSNILEFICVHFI 237
I++++LEF+CV+++
Sbjct: 343 IYASLLEFVCVNYV 356
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.8 bits (49), Expect = 1.5
Identities = 6/14 (42%), Positives = 14/14 (100%)
Frame = -3
Query: 278 IFSNILEFICVHFI 237
I++++LEF+CV+++
Sbjct: 394 IYASLLEFVCVNYV 407
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.8 bits (49), Expect = 1.5
Identities = 6/14 (42%), Positives = 14/14 (100%)
Frame = -3
Query: 278 IFSNILEFICVHFI 237
I++++LEF+CV+++
Sbjct: 343 IYASLLEFVCVNYV 356
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 490 KKEVIGEAGDFITSPEISQLFGEILG 567
K+ +GE + T PE++ LF +I+G
Sbjct: 474 KRLWLGETIEAKTYPEVTMLFSDIVG 499
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.6 bits (46), Expect = 3.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 111 TQEEVI*KNVKPETLLQSKKKRESNRKQDK 200
TQ+ V K + L+SKK ES RK D+
Sbjct: 357 TQQSVELKLALDQEQLKSKKLEESMRKLDE 386
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.8 bits (44), Expect = 6.0
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +1
Query: 427 PITVAEYMHIVTTNPTEGYYMKKEVIGEAGDFITSPEISQLFGEILGIWFY 579
P TV + + TEG+ DF+T E +++F + IW Y
Sbjct: 184 PFTVLPLLKVWGRYTTEGFLTTCSF-----DFLTDDEDTKVFVTCIFIWAY 229
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 6.0
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +1
Query: 427 PITVAEYMHIVTTNPTEGYYMKKEVIGEAGDFITSPEISQLFGEILGIWFY 579
P TV + + TEG+ DF+T E +++F + IW Y
Sbjct: 184 PFTVLPLLKVWGRYTTEGFLTTCSF-----DFLTDDEDTKVFVTCIFIWAY 229
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 302 NLGESYLHIFSNILEFICVH 243
N +SY HI + EFI +H
Sbjct: 102 NEKQSYFHIATTSNEFIRIH 121
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 302 NLGESYLHIFSNILEFICVH 243
N +SY HI + EFI +H
Sbjct: 102 NEKQSYFHIATTSNEFIRIH 121
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 302 NLGESYLHIFSNILEFICVH 243
N +SY HI + EFI +H
Sbjct: 41 NEKQSYFHIATTSNEFIRIH 60
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,080
Number of Sequences: 438
Number of extensions: 2747
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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