BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b06f (655 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 1.5 DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 1.5 DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.5 DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 1.5 AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 24 1.5 AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 3.4 U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 6.0 AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 6.0 DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 7.9 DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 7.9 AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 7.9 >DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride channel variant 4 protein. Length = 489 Score = 23.8 bits (49), Expect = 1.5 Identities = 6/14 (42%), Positives = 14/14 (100%) Frame = -3 Query: 278 IFSNILEFICVHFI 237 I++++LEF+CV+++ Sbjct: 374 IYASLLEFVCVNYV 387 >DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride channel variant 3 protein. Length = 475 Score = 23.8 bits (49), Expect = 1.5 Identities = 6/14 (42%), Positives = 14/14 (100%) Frame = -3 Query: 278 IFSNILEFICVHFI 237 I++++LEF+CV+++ Sbjct: 343 IYASLLEFVCVNYV 356 >DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride channel variant 1 protein. Length = 509 Score = 23.8 bits (49), Expect = 1.5 Identities = 6/14 (42%), Positives = 14/14 (100%) Frame = -3 Query: 278 IFSNILEFICVHFI 237 I++++LEF+CV+++ Sbjct: 394 IYASLLEFVCVNYV 407 >DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride channel protein. Length = 458 Score = 23.8 bits (49), Expect = 1.5 Identities = 6/14 (42%), Positives = 14/14 (100%) Frame = -3 Query: 278 IFSNILEFICVHFI 237 I++++LEF+CV+++ Sbjct: 343 IYASLLEFVCVNYV 356 >AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase alpha 1 subunit protein. Length = 699 Score = 23.8 bits (49), Expect = 1.5 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = +1 Query: 490 KKEVIGEAGDFITSPEISQLFGEILG 567 K+ +GE + T PE++ LF +I+G Sbjct: 474 KRLWLGETIEAKTYPEVTMLFSDIVG 499 >AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase beta-3 protein. Length = 832 Score = 22.6 bits (46), Expect = 3.4 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +3 Query: 111 TQEEVI*KNVKPETLLQSKKKRESNRKQDK 200 TQ+ V K + L+SKK ES RK D+ Sbjct: 357 TQQSVELKLALDQEQLKSKKLEESMRKLDE 386 >U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive opsin protein. Length = 377 Score = 21.8 bits (44), Expect = 6.0 Identities = 14/51 (27%), Positives = 22/51 (43%) Frame = +1 Query: 427 PITVAEYMHIVTTNPTEGYYMKKEVIGEAGDFITSPEISQLFGEILGIWFY 579 P TV + + TEG+ DF+T E +++F + IW Y Sbjct: 184 PFTVLPLLKVWGRYTTEGFLTTCSF-----DFLTDDEDTKVFVTCIFIWAY 229 >AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin protein. Length = 377 Score = 21.8 bits (44), Expect = 6.0 Identities = 14/51 (27%), Positives = 22/51 (43%) Frame = +1 Query: 427 PITVAEYMHIVTTNPTEGYYMKKEVIGEAGDFITSPEISQLFGEILGIWFY 579 P TV + + TEG+ DF+T E +++F + IW Y Sbjct: 184 PFTVLPLLKVWGRYTTEGFLTTCSF-----DFLTDDEDTKVFVTCIFIWAY 229 >DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 21.4 bits (43), Expect = 7.9 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = -3 Query: 302 NLGESYLHIFSNILEFICVH 243 N +SY HI + EFI +H Sbjct: 102 NEKQSYFHIATTSNEFIRIH 121 >DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 21.4 bits (43), Expect = 7.9 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = -3 Query: 302 NLGESYLHIFSNILEFICVH 243 N +SY HI + EFI +H Sbjct: 102 NEKQSYFHIATTSNEFIRIH 121 >AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl subunit protein. Length = 365 Score = 21.4 bits (43), Expect = 7.9 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = -3 Query: 302 NLGESYLHIFSNILEFICVH 243 N +SY HI + EFI +H Sbjct: 41 NEKQSYFHIATTSNEFIRIH 60 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 144,080 Number of Sequences: 438 Number of extensions: 2747 Number of successful extensions: 14 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 14 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19804986 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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