BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b04f (627 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 25 0.39 AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 23 2.8 AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 6.4 AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 6.4 AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 6.4 AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 6.4 AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 6.4 >AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nuclear receptor protein. Length = 407 Score = 25.4 bits (53), Expect = 0.39 Identities = 10/33 (30%), Positives = 17/33 (51%) Frame = -2 Query: 440 CTRCSSGNNAQHFGSYSCSKECKRMANNLLSKE 342 C+ C + +H+G YSC + CK + K+ Sbjct: 86 CSICGDRASGKHYGVYSC-EGCKGFFKRTVRKD 117 >AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor candidate 48 protein. Length = 408 Score = 22.6 bits (46), Expect = 2.8 Identities = 8/22 (36%), Positives = 14/22 (63%) Frame = -2 Query: 416 NAQHFGSYSCSKECKRMANNLL 351 N +HF S CS + + + N++L Sbjct: 344 NMEHFFSVKCSIQSESLLNDIL 365 >AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase protein. Length = 677 Score = 21.4 bits (43), Expect = 6.4 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Frame = -2 Query: 497 KHSSHFYY-FVESINCCSFRCT 435 K ++F Y FV + C +F CT Sbjct: 49 KTRTYFIYAFVAPVKCLAFFCT 70 >AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase protein. Length = 1464 Score = 21.4 bits (43), Expect = 6.4 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Frame = -2 Query: 497 KHSSHFYY-FVESINCCSFRCT 435 K ++F Y FV + C +F CT Sbjct: 282 KTRTYFIYAFVAPVKCLAFFCT 303 >AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2 protein. Length = 1464 Score = 21.4 bits (43), Expect = 6.4 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Frame = -2 Query: 497 KHSSHFYY-FVESINCCSFRCT 435 K ++F Y FV + C +F CT Sbjct: 282 KTRTYFIYAFVAPVKCLAFFCT 303 >AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain transcription factor Prothoraxlessprotein. Length = 323 Score = 21.4 bits (43), Expect = 6.4 Identities = 9/16 (56%), Positives = 9/16 (56%) Frame = +2 Query: 125 PPHQNPPPYVTQPQPG 172 PPHQ PP QP G Sbjct: 203 PPHQQ-PPIQQQPNQG 217 >AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless protein. Length = 325 Score = 21.4 bits (43), Expect = 6.4 Identities = 9/16 (56%), Positives = 9/16 (56%) Frame = +2 Query: 125 PPHQNPPPYVTQPQPG 172 PPHQ PP QP G Sbjct: 205 PPHQQ-PPIQQQPNQG 219 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 158,503 Number of Sequences: 336 Number of extensions: 3685 Number of successful extensions: 9 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 122,585 effective HSP length: 54 effective length of database: 104,441 effective search space used: 16083914 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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