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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b04f
         (627 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_23925| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.082
SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1)                 31   0.77 
SB_12923| Best HMM Match : zf-C3HC4 (HMM E-Value=1.1)                  30   1.3  
SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09)               29   3.1  
SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_19168| Best HMM Match : rve (HMM E-Value=3.9e-38)                   29   4.1  
SB_58789| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.4  
SB_55551| Best HMM Match : CBM_5_12 (HMM E-Value=8.7)                  28   5.4  
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_41995| Best HMM Match : ANF_receptor (HMM E-Value=0)                28   7.1  
SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)                   28   7.1  
SB_30597| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  
SB_53217| Best HMM Match : RVT_1 (HMM E-Value=3.1e-13)                 27   9.4  

>SB_23925| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 217

 Score = 34.3 bits (75), Expect = 0.082
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -3

Query: 148 RWRVLMRRYEVCARQICFIFNIGHFSLVRHKSRTKFPVIRLYEHHNR 8
           RWR L R YE C R    ++ I  F L R K  T+   I    H ++
Sbjct: 57  RWRTLERPYEPCRRDEDRLYRIEKFRLTRFKDHTRKAAIFKISHKHK 103


>SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1)
          Length = 530

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 341 LLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYIGNYS 454
           L C +GC P +C P CT +C   +   PN  A +   S
Sbjct: 441 LTCPVGC-PSMCAPSCTPACCAEQQCWPNQPALLAQQS 477


>SB_12923| Best HMM Match : zf-C3HC4 (HMM E-Value=1.1)
          Length = 166

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 251 PSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCL 352
           P + TCP C   IVTR    S   T+  +A LC+
Sbjct: 42  PVYTTCPFCQEKIVTRTSFKSGKYTYWTSACLCI 75


>SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09)
          Length = 474

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
 Frame = +2

Query: 266 CPSCNTAIV--TRVERVSTTKTHLFAALLCL---IGCWPCVC-IPYCTNSCQNAEHYCPN 427
           CP CN ++    ++     T  +     +C+   +    C C   YC  +C +  +YCP 
Sbjct: 380 CPLCNESVNGNQKIYFAMDTSYNDLTCQICMDAEVNTAFCPCGHVYCCQTCASNLYYCPL 439

Query: 428 CSAYI 442
           C  +I
Sbjct: 440 CKTFI 444


>SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2671

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2

Query: 464 SINCCSFRCTRCSSGNNAQHFGSYSCSKECKRMANN 357
           SIN C + C +C  G  +    S SC K  K   +N
Sbjct: 511 SINRCCWECFQCPEGTISSKESSTSCKKCSKEQMSN 546


>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 5222

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +2

Query: 365 PCVCIPYCTNSCQNA-EHYCP-NCSAYIGNY 451
           PCV   YCTN    A EH CP     +IG+Y
Sbjct: 859 PCVKGHYCTNGTTTATEHPCPAGGKCWIGHY 889


>SB_19168| Best HMM Match : rve (HMM E-Value=3.9e-38)
          Length = 586

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -2

Query: 470 VESINCCSFRCTRCSSGNNAQHFGSYSCSKECKRMANNLLSK 345
           VE +    + C R ++  N+  F S   ++ C+R AN L+ +
Sbjct: 324 VELMKAMKYCCDRLAARTNSLQFLSLKLTRFCRRQANGLVER 365


>SB_58789| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 987

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 452 CSFRCTRCSSGNNAQHFGSYSC 387
           C + C RC  G  +   GSY+C
Sbjct: 497 CCWNCQRCEKGTVSSEAGSYAC 518


>SB_55551| Best HMM Match : CBM_5_12 (HMM E-Value=8.7)
          Length = 463

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -2

Query: 479 YYFVESINC-CSFRCTRCSSGNNAQHFGSYSCSKEC 375
           YY  ES N      C    S  NA+H+  Y+ +KEC
Sbjct: 158 YYKKESFNMKTKGECIEKYSNGNAKHWSKYNDAKEC 193


>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3474

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +2

Query: 392 NSCQNAEHYCP-NCSAYIGNYSS*CS 466
           + C   +H C  NC+  IGNYS  C+
Sbjct: 669 DECATGKHQCAQNCTNIIGNYSCSCT 694


>SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1300

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 18/72 (25%), Positives = 27/72 (37%)
 Frame = +2

Query: 251 PSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNC 430
           P H +C  C  A   R  + +     +++   CL  C P          C+  ++YC  C
Sbjct: 768 PCHESCAECTGAGHDRCTKCNHGLVKVWSQ--CLASCPPSYFFNPRDMQCEPCDYYCSTC 825

Query: 431 SAYIGNYSS*CS 466
               GN    CS
Sbjct: 826 EG--GNGLRNCS 835


>SB_41995| Best HMM Match : ANF_receptor (HMM E-Value=0)
          Length = 785

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 479 YYFVESINCCSFRCTRCSSGNNAQHFGSYSCS 384
           Y+     NCC + CT C  G  +  + + SCS
Sbjct: 534 YWQTRMKNCC-WECTECPQGTISPRYAAPSCS 564


>SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)
          Length = 1103

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +2

Query: 308 VSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYI 442
           +S+ + +L     C+  C P VC P C++ C     Y PN   ++
Sbjct: 691 LSSPEMYLPQIRQCIAPC-PQVCAPACSDICCGFGAYAPNPDTHV 734


>SB_30597| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 698

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 437 TRCSSGNNAQHFGSYSCSK-ECKRMANNLLSKEEQQTDVSLS 315
           TRC+  N      S  C++ EC   ANN+ S+ + Q ++ +S
Sbjct: 293 TRCTQCNQRMDSLSGLCTRTECPAAANNMTSQVKTQYEIPVS 334


>SB_53217| Best HMM Match : RVT_1 (HMM E-Value=3.1e-13)
          Length = 436

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 458 NCCSFRCTRCSSGNNAQHFGSYSCSKECK 372
           N C ++  +C +  N  H      SKECK
Sbjct: 54  NSCKYKKYKCDNSGNVGHLKRVCKSKECK 82


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,455,640
Number of Sequences: 59808
Number of extensions: 434585
Number of successful extensions: 1622
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1618
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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