Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV12b04f
(627 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein pr... 71 3e-12
BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha f... 71 3e-12
BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-indu... 71 3e-12
BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha f... 71 3e-12
BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-indu... 71 3e-12
BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-indu... 71 3e-12
BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-indu... 71 3e-12
BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-indu... 71 3e-12
BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-indu... 71 3e-12
BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-indu... 71 3e-12
BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-indu... 71 3e-12
BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein. 71 3e-12
AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane... 71 3e-12
DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing pro... 52 1e-06
CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein. 52 1e-06
BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for IM... 52 1e-06
BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open read... 52 1e-06
AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I... 52 1e-06
AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open read... 45 3e-04
U77396-1|AAB36550.1| 228|Homo sapiens LPS-Induced TNF-Alpha Fac... 33 0.83
AF010312-1|AAC39530.1| 228|Homo sapiens Pig7 protein. 33 0.83
U39412-1|AAC80170.1| 295|Homo sapiens alpha SNAP protein. 31 4.4
BT019568-1|AAV38375.1| 295|Homo sapiens N-ethylmaleimide-sensit... 31 4.4
BC091511-1|AAH91511.1| 295|Homo sapiens N-ethylmaleimide-sensit... 31 4.4
BC028234-1|AAH28234.1| 295|Homo sapiens N-ethylmaleimide-sensit... 31 4.4
BC007432-1|AAH07432.1| 295|Homo sapiens N-ethylmaleimide-sensit... 31 4.4
BC001165-1|AAH01165.1| 295|Homo sapiens N-ethylmaleimide-sensit... 31 4.4
U72342-1|AAC51111.1| 410|Homo sapiens platelet activating facto... 30 7.7
U48508-1|AAC51191.1| 5038|Homo sapiens skeletal muscle ryanodine... 30 7.7
L13387-1|AAA02882.1| 288|Homo sapiens Miller-Dieker lissencepha... 30 7.7
L13386-1|AAA02881.1| 410|Homo sapiens Miller-Dieker lissencepha... 30 7.7
L13385-1|AAA02880.1| 410|Homo sapiens Miller-Dieker lissencepha... 30 7.7
J05200-1|AAA60294.1| 5032|Homo sapiens RYR1 protein. 30 7.7
BC064638-1|AAH64638.1| 410|Homo sapiens platelet-activating fac... 30 7.7
AF400434-1|AAK92483.1| 410|Homo sapiens platelet-activating fac... 30 7.7
AF208838-1|AAL34973.1| 410|Homo sapiens Miller-Dieker lissencep... 30 7.7
AF208837-1|AAL34972.1| 410|Homo sapiens Miller-Dieker lissencep... 30 7.7
>BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein
protein.
Length = 161
Score = 71.3 bits (167), Expect = 3e-12
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 137 NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 316
NPP Y TQP P + P CPSCN IV+++ +
Sbjct: 57 NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112
Query: 317 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 451
T L LCL+GC C IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 71.3 bits (167), Expect = 3e-12
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 137 NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 316
NPP Y TQP P + P CPSCN IV+++ +
Sbjct: 57 NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112
Query: 317 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 451
T L LCL+GC C IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 71.3 bits (167), Expect = 3e-12
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 137 NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 316
NPP Y TQP P + P CPSCN IV+++ +
Sbjct: 57 NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112
Query: 317 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 451
T L LCL+GC C IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 71.3 bits (167), Expect = 3e-12
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 137 NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 316
NPP Y TQP P + P CPSCN IV+++ +
Sbjct: 57 NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112
Query: 317 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 451
T L LCL+GC C IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 71.3 bits (167), Expect = 3e-12
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 137 NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 316
NPP Y TQP P + P CPSCN IV+++ +
Sbjct: 57 NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112
Query: 317 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 451
T L LCL+GC C IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 71.3 bits (167), Expect = 3e-12
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 137 NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 316
NPP Y TQP P + P CPSCN IV+++ +
Sbjct: 57 NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112
Query: 317 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 451
T L LCL+GC C IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 71.3 bits (167), Expect = 3e-12
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 137 NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 316
NPP Y TQP P + P CPSCN IV+++ +
Sbjct: 57 NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112
Query: 317 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 451
T L LCL+GC C IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 71.3 bits (167), Expect = 3e-12
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 137 NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 316
NPP Y TQP P + P CPSCN IV+++ +
Sbjct: 57 NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112
Query: 317 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 451
T L LCL+GC C IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 71.3 bits (167), Expect = 3e-12
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 137 NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 316
NPP Y TQP P + P CPSCN IV+++ +
Sbjct: 57 NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112
Query: 317 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 451
T L LCL+GC C IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 71.3 bits (167), Expect = 3e-12
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 137 NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 316
NPP Y TQP P + P CPSCN IV+++ +
Sbjct: 57 NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112
Query: 317 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 451
T L LCL+GC C IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 71.3 bits (167), Expect = 3e-12
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 137 NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 316
NPP Y TQP P + P CPSCN IV+++ +
Sbjct: 57 NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112
Query: 317 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 451
T L LCL+GC C IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein.
Length = 161
Score = 71.3 bits (167), Expect = 3e-12
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 137 NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 316
NPP Y TQP P + P CPSCN IV+++ +
Sbjct: 57 NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112
Query: 317 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 451
T L LCL+GC C IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane
protein of lysosome/late endosome protein.
Length = 161
Score = 71.3 bits (167), Expect = 3e-12
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 137 NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 316
NPP Y TQP P + P CPSCN IV+++ +
Sbjct: 57 NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112
Query: 317 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 451
T L LCL+GC C IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158
>DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing
protein protein.
Length = 208
Score = 52.4 bits (120), Expect = 1e-06
Identities = 32/122 (26%), Positives = 40/122 (32%), Gaps = 4/122 (3%)
Frame = +2
Query: 110 GTHFVPPHQNPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQ---MGPDPSHYTCPSCN 280
G H + P PY P PG Q P CP C
Sbjct: 87 GPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQ 146
Query: 281 TAIVTRVERVSTTKTHLFAALLCLIGC-WPCVCIPYCTNSCQNAEHYCPNCSAYIGNYSS 457
AI T++ + C +GC C IP N ++ H CP+C AYI Y
Sbjct: 147 QAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTYKR 206
Query: 458 *C 463
C
Sbjct: 207 LC 208
>CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein.
Length = 208
Score = 52.4 bits (120), Expect = 1e-06
Identities = 32/122 (26%), Positives = 40/122 (32%), Gaps = 4/122 (3%)
Frame = +2
Query: 110 GTHFVPPHQNPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQ---MGPDPSHYTCPSCN 280
G H + P PY P PG Q P CP C
Sbjct: 87 GPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQ 146
Query: 281 TAIVTRVERVSTTKTHLFAALLCLIGC-WPCVCIPYCTNSCQNAEHYCPNCSAYIGNYSS 457
AI T++ + C +GC C IP N ++ H CP+C AYI Y
Sbjct: 147 QAIATKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTYKR 206
Query: 458 *C 463
C
Sbjct: 207 LC 208
>BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for
IMAGE:3350242) protein.
Length = 125
Score = 52.4 bits (120), Expect = 1e-06
Identities = 32/122 (26%), Positives = 40/122 (32%), Gaps = 4/122 (3%)
Frame = +2
Query: 110 GTHFVPPHQNPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQ---MGPDPSHYTCPSCN 280
G H + P PY P PG Q P CP C
Sbjct: 4 GPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQ 63
Query: 281 TAIVTRVERVSTTKTHLFAALLCLIGC-WPCVCIPYCTNSCQNAEHYCPNCSAYIGNYSS 457
AI T++ + C +GC C IP N ++ H CP+C AYI Y
Sbjct: 64 QAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTYKR 123
Query: 458 *C 463
C
Sbjct: 124 LC 125
>BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 208
Score = 52.4 bits (120), Expect = 1e-06
Identities = 32/122 (26%), Positives = 40/122 (32%), Gaps = 4/122 (3%)
Frame = +2
Query: 110 GTHFVPPHQNPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQ---MGPDPSHYTCPSCN 280
G H + P PY P PG Q P CP C
Sbjct: 87 GPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQ 146
Query: 281 TAIVTRVERVSTTKTHLFAALLCLIGC-WPCVCIPYCTNSCQNAEHYCPNCSAYIGNYSS 457
AI T++ + C +GC C IP N ++ H CP+C AYI Y
Sbjct: 147 QAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTYKR 206
Query: 458 *C 463
C
Sbjct: 207 LC 208
>AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I1
protein.
Length = 208
Score = 52.4 bits (120), Expect = 1e-06
Identities = 32/122 (26%), Positives = 40/122 (32%), Gaps = 4/122 (3%)
Frame = +2
Query: 110 GTHFVPPHQNPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQ---MGPDPSHYTCPSCN 280
G H + P PY P PG Q P CP C
Sbjct: 87 GPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQ 146
Query: 281 TAIVTRVERVSTTKTHLFAALLCLIGC-WPCVCIPYCTNSCQNAEHYCPNCSAYIGNYSS 457
AI T++ + C +GC C IP N ++ H CP+C AYI Y
Sbjct: 147 QAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTYKR 206
Query: 458 *C 463
C
Sbjct: 207 LC 208
>AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 261
Score = 44.8 bits (101), Expect = 3e-04
Identities = 28/113 (24%), Positives = 36/113 (31%), Gaps = 4/113 (3%)
Frame = +2
Query: 110 GTHFVPPHQNPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQ---MGPDPSHYTCPSCN 280
G H + P PY P PG Q P CP C
Sbjct: 87 GPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQ 146
Query: 281 TAIVTRVERVSTTKTHLFAALLCLIGC-WPCVCIPYCTNSCQNAEHYCPNCSA 436
AI T++ + C +GC C IP N ++ H CP+C A
Sbjct: 147 QAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKA 199
>U77396-1|AAB36550.1| 228|Homo sapiens LPS-Induced TNF-Alpha Factor
protein.
Length = 228
Score = 33.1 bits (72), Expect = 0.83
Identities = 22/74 (29%), Positives = 28/74 (37%)
Frame = +2
Query: 137 NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 316
NPP Y TQP P + P CPSCN IV+++ +
Sbjct: 57 NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112
Query: 317 TKTHLFAALLCLIG 358
T L LCL+G
Sbjct: 113 ALTWLSCGSLCLLG 126
>AF010312-1|AAC39530.1| 228|Homo sapiens Pig7 protein.
Length = 228
Score = 33.1 bits (72), Expect = 0.83
Identities = 22/74 (29%), Positives = 28/74 (37%)
Frame = +2
Query: 137 NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 316
NPP Y TQP P + P CPSCN IV+++ +
Sbjct: 57 NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112
Query: 317 TKTHLFAALLCLIG 358
T L LCL+G
Sbjct: 113 ALTWLSCGSLCLLG 126
>U39412-1|AAC80170.1| 295|Homo sapiens alpha SNAP protein.
Length = 295
Score = 30.7 bits (66), Expect = 4.4
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 542 IYDPTKTQAYIYV*TKHSSHFYYFVESIN--CCSFRCTRCSSGNNAQHFGSYSCSKECKR 369
IY+ T A K+S+ Y+F ++ C + + + F ++S S+ECK
Sbjct: 184 IYEQVGTNAMDTPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKL 243
Query: 368 MANNLLSKEEQQTD 327
M L + EEQ D
Sbjct: 244 MKKLLEAHEEQNVD 257
>BT019568-1|AAV38375.1| 295|Homo sapiens N-ethylmaleimide-sensitive
factor attachment protein, alpha protein.
Length = 295
Score = 30.7 bits (66), Expect = 4.4
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 542 IYDPTKTQAYIYV*TKHSSHFYYFVESIN--CCSFRCTRCSSGNNAQHFGSYSCSKECKR 369
IY+ T A K+S+ Y+F ++ C + + + F ++S S+ECK
Sbjct: 184 IYEQVGTNAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKL 243
Query: 368 MANNLLSKEEQQTD 327
M L + EEQ D
Sbjct: 244 MKKLLEAHEEQNVD 257
>BC091511-1|AAH91511.1| 295|Homo sapiens N-ethylmaleimide-sensitive
factor attachment protein, alpha protein.
Length = 295
Score = 30.7 bits (66), Expect = 4.4
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 542 IYDPTKTQAYIYV*TKHSSHFYYFVESIN--CCSFRCTRCSSGNNAQHFGSYSCSKECKR 369
IY+ T A K+S+ Y+F ++ C + + + F ++S S+ECK
Sbjct: 184 IYEQVGTNAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKL 243
Query: 368 MANNLLSKEEQQTD 327
M L + EEQ D
Sbjct: 244 MKKLLEAHEEQNVD 257
>BC028234-1|AAH28234.1| 295|Homo sapiens N-ethylmaleimide-sensitive
factor attachment protein, alpha protein.
Length = 295
Score = 30.7 bits (66), Expect = 4.4
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 542 IYDPTKTQAYIYV*TKHSSHFYYFVESIN--CCSFRCTRCSSGNNAQHFGSYSCSKECKR 369
IY+ T A K+S+ Y+F ++ C + + + F ++S S+ECK
Sbjct: 184 IYEQVGTNAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKL 243
Query: 368 MANNLLSKEEQQTD 327
M L + EEQ D
Sbjct: 244 MKKLLEAHEEQNVD 257
>BC007432-1|AAH07432.1| 295|Homo sapiens N-ethylmaleimide-sensitive
factor attachment protein, alpha protein.
Length = 295
Score = 30.7 bits (66), Expect = 4.4
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 542 IYDPTKTQAYIYV*TKHSSHFYYFVESIN--CCSFRCTRCSSGNNAQHFGSYSCSKECKR 369
IY+ T A K+S+ Y+F ++ C + + + F ++S S+ECK
Sbjct: 184 IYEQVGTNAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKL 243
Query: 368 MANNLLSKEEQQTD 327
M L + EEQ D
Sbjct: 244 MKKLLEAHEEQNVD 257
>BC001165-1|AAH01165.1| 295|Homo sapiens N-ethylmaleimide-sensitive
factor attachment protein, alpha protein.
Length = 295
Score = 30.7 bits (66), Expect = 4.4
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 542 IYDPTKTQAYIYV*TKHSSHFYYFVESIN--CCSFRCTRCSSGNNAQHFGSYSCSKECKR 369
IY+ T A K+S+ Y+F ++ C + + + F ++S S+ECK
Sbjct: 184 IYEQVGTNAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKL 243
Query: 368 MANNLLSKEEQQTD 327
M L + EEQ D
Sbjct: 244 MKKLLEAHEEQNVD 257
>U72342-1|AAC51111.1| 410|Homo sapiens platelet activating factor
acetylhydrolase, brain isoform, 45 kDa subunit protein.
Length = 410
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +2
Query: 479 KNANCV*FI--HKYMPVSSWDHKSKPYTMTSMIGSTLK-WYCR 598
KN C+ + H++ S HK+ PY +T + T+K W CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>U48508-1|AAC51191.1| 5038|Homo sapiens skeletal muscle ryanodine
receptor protein.
Length = 5038
Score = 29.9 bits (64), Expect = 7.7
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -3
Query: 553 IWFGFMIPRRHRHIFMYELNTVRIFTILL 467
+W G++ P H+H ++L+ VR+ T+ +
Sbjct: 1447 VWAGWVTPDYHQHDMSFDLSKVRVVTVTM 1475
>L13387-1|AAA02882.1| 288|Homo sapiens Miller-Dieker lissencephaly
protein protein.
Length = 288
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +2
Query: 479 KNANCV*FI--HKYMPVSSWDHKSKPYTMTSMIGSTLK-WYCR 598
KN C+ + H++ S HK+ PY +T + T+K W CR
Sbjct: 246 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 288
>L13386-1|AAA02881.1| 410|Homo sapiens Miller-Dieker lissencephaly
protein protein.
Length = 410
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +2
Query: 479 KNANCV*FI--HKYMPVSSWDHKSKPYTMTSMIGSTLK-WYCR 598
KN C+ + H++ S HK+ PY +T + T+K W CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>L13385-1|AAA02880.1| 410|Homo sapiens Miller-Dieker lissencephaly
protein protein.
Length = 410
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +2
Query: 479 KNANCV*FI--HKYMPVSSWDHKSKPYTMTSMIGSTLK-WYCR 598
KN C+ + H++ S HK+ PY +T + T+K W CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>J05200-1|AAA60294.1| 5032|Homo sapiens RYR1 protein.
Length = 5032
Score = 29.9 bits (64), Expect = 7.7
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -3
Query: 553 IWFGFMIPRRHRHIFMYELNTVRIFTILL 467
+W G++ P H+H ++L+ VR+ T+ +
Sbjct: 1446 VWAGWVTPDYHQHDMSFDLSKVRVVTVTM 1474
>BC064638-1|AAH64638.1| 410|Homo sapiens platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit 45kDa
protein.
Length = 410
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +2
Query: 479 KNANCV*FI--HKYMPVSSWDHKSKPYTMTSMIGSTLK-WYCR 598
KN C+ + H++ S HK+ PY +T + T+K W CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>AF400434-1|AAK92483.1| 410|Homo sapiens platelet-activating factor
acetyl hydrolase isoform Ib alpha subunit protein.
Length = 410
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +2
Query: 479 KNANCV*FI--HKYMPVSSWDHKSKPYTMTSMIGSTLK-WYCR 598
KN C+ + H++ S HK+ PY +T + T+K W CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>AF208838-1|AAL34973.1| 410|Homo sapiens Miller-Dieker
lissencephaly protein protein.
Length = 410
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +2
Query: 479 KNANCV*FI--HKYMPVSSWDHKSKPYTMTSMIGSTLK-WYCR 598
KN C+ + H++ S HK+ PY +T + T+K W CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>AF208837-1|AAL34972.1| 410|Homo sapiens Miller-Dieker
lissencephaly protein protein.
Length = 410
Score = 29.9 bits (64), Expect = 7.7
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +2
Query: 479 KNANCV*FI--HKYMPVSSWDHKSKPYTMTSMIGSTLK-WYCR 598
KN C+ + H++ S HK+ PY +T + T+K W CR
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,610,291
Number of Sequences: 237096
Number of extensions: 2172360
Number of successful extensions: 11186
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 10324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11143
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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