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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV12b04f
         (627 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47069-3|CAE17781.1|  141|Caenorhabditis elegans Hypothetical pr...    71   7e-13
U67956-1|AAB07690.2|  157|Caenorhabditis elegans Hypothetical pr...    51   6e-07
AL110500-18|CAB54478.1|  118|Caenorhabditis elegans Hypothetical...    47   1e-05
AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical ...    46   2e-05
AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical...    46   3e-05
AL032627-14|CAA21549.1|  386|Caenorhabditis elegans Hypothetical...    43   2e-04
AC084153-15|AAK84589.2|  152|Caenorhabditis elegans Hypothetical...    43   2e-04
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut...    39   0.003
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion...    39   0.003
AF068714-8|AAC17809.2|   86|Caenorhabditis elegans Hypothetical ...    38   0.004
AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical ...    35   0.055
AF068714-9|AAC17810.1|   87|Caenorhabditis elegans Hypothetical ...    33   0.13 
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr...    33   0.17 
AL032626-23|CAE17974.1|   88|Caenorhabditis elegans Hypothetical...    33   0.17 
AL032626-7|CAA21544.1|   79|Caenorhabditis elegans Hypothetical ...    32   0.39 
AF039044-8|AAG24129.1|  717|Caenorhabditis elegans Nuclear hormo...    30   1.2  
U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF078785-11|AAC27097.2|  294|Caenorhabditis elegans Hypothetical...    30   1.6  
AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical...    30   1.6  
Z19156-1|CAA79563.1|  160|Caenorhabditis elegans Hypothetical pr...    29   2.1  
U29377-3|AAA68720.2|  472|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL031629-6|CAA20980.2|  948|Caenorhabditis elegans Hypothetical ...    29   2.7  
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr...    28   4.8  
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr...    28   4.8  
AL110477-13|CAB54337.2|  789|Caenorhabditis elegans Hypothetical...    28   4.8  
AF230279-1|AAG16654.1|  789|Caenorhabditis elegans SWI3-like pro...    28   4.8  
AJ871144-1|CAI38753.2|  476|Caenorhabditis elegans UDP-galactopy...    27   8.3  
AF125442-8|AAD12787.2|  476|Caenorhabditis elegans Hypothetical ...    27   8.3  
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ...    27   8.3  

>Z47069-3|CAE17781.1|  141|Caenorhabditis elegans Hypothetical
           protein F36G3.3 protein.
          Length = 141

 Score = 70.9 bits (166), Expect = 7e-13
 Identities = 30/70 (42%), Positives = 39/70 (55%)
 Frame = +2

Query: 236 QMGPDPSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEH 415
           ++ P  +   CP C   IVTR + V    T +F A L L GCW C  +P+C  SC++  H
Sbjct: 67  RLEPHATKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWCCCFLPFCLRSCKDIIH 126

Query: 416 YCPNCSAYIG 445
            CPNC A IG
Sbjct: 127 TCPNCRAMIG 136


>U67956-1|AAB07690.2|  157|Caenorhabditis elegans Hypothetical
           protein F16F9.1 protein.
          Length = 157

 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 23/61 (37%), Positives = 36/61 (59%)
 Frame = +2

Query: 263 TCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYI 442
           TC SC   + T  + V  + T +   +L LI  +P   +P+C +SC++A HYCP C+A +
Sbjct: 92  TCYSCGKYVHTLPKFVIGSLTWI-VFILVLICFFPLAFVPFCLDSCKDAHHYCPRCNALL 150

Query: 443 G 445
           G
Sbjct: 151 G 151


>AL110500-18|CAB54478.1|  118|Caenorhabditis elegans Hypothetical
           protein Y87G2A.18 protein.
          Length = 118

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
 Frame = +2

Query: 251 PSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGC------WPCVCIPYCTNSCQNAE 412
           P    CP C   IV+ +ERV+     +  A+L  +G       W   C+P+  +   +  
Sbjct: 43  PIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFCCVPFFLDQLLDVN 102

Query: 413 HYCPNCSAYIGNYS 454
           H CP C  ++G ++
Sbjct: 103 HSCPACKKFLGRFN 116


>AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical
           protein Y37D8A.6 protein.
          Length = 132

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
 Frame = +2

Query: 236 QMGPDPSHYT--CPSCNTAIVTRVERVS--TTKTHLFAALLCLIGCWPCVCIPYCTNSCQ 403
           +M P    YT  CP CNT + TRVER     + T LF  L      +P +C  +C +  +
Sbjct: 59  KMAPSFEPYTEFCPRCNTNVCTRVERTMGFCSWTMLFLGLFVF---FPLLCC-FCLDGFK 114

Query: 404 NAEHYCPNCSAYI 442
           ++ H CPNC   +
Sbjct: 115 DSRHSCPNCGTIL 127


>AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical
           protein Y87G2A.19 protein.
          Length = 110

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
 Frame = +2

Query: 251 PSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIG--CWPC--VCIPYCTNSCQNAEHY 418
           P    CP C     T +  V+   T++   ++ + G    P   + +P+C  + ++AEHY
Sbjct: 33  PQLLDCPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWVPFCVETFKDAEHY 92

Query: 419 CPNCSAYIGNY 451
           CP+C A+IG Y
Sbjct: 93  CPSCRAWIGTY 103


>AL032627-14|CAA21549.1|  386|Caenorhabditis elegans Hypothetical
           protein Y41C4A.11 protein.
          Length = 386

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
 Frame = +2

Query: 266 CPSCNTAIVTRVERVSTTKTHLFAALLCLIG----CWPCVCIPYCTNSCQNAEHYCPNCS 433
           CP C T I+T V    TT   +   L+C  G    CWP + I  C +  ++ +H CPNC 
Sbjct: 36  CPKCQTTIMTSV----TTHIGMCWWLICFFGTFLFCWP-ILICLCFDVSKDVDHNCPNCG 90

Query: 434 AYIGNYSS*CSQQNSKNANCV*FIHKYMPVSSWD-HKSKPYTMTSM-IGSTLKW 589
             +       S + + N     F+     V S D H  KP+ +T++  G+   W
Sbjct: 91  LLLAT-----SNRAAPN-----FVSHSDRVKSVDFHSEKPWILTALHTGNVQIW 134


>AC084153-15|AAK84589.2|  152|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.15 protein.
          Length = 152

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +2

Query: 266 CPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYI 442
           CP C T++ TR      T   +   +   + CWP +    C  S ++ +H+CPNC   +
Sbjct: 88  CPRCQTSVTTRTVHSIGTCWWIILFIGVFVFCWPILYCLCCAGS-KDVKHFCPNCGTML 145


>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glutamate
            receptor protein1 protein.
          Length = 1025

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +2

Query: 266  CPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYIG 445
            C  C   + + V R +     L   L  ++  WPC  +P   +S  +  H CP CS  +G
Sbjct: 954  CSRCRNIVESDVHRETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMG 1013

Query: 446  NY 451
             +
Sbjct: 1014 RF 1015


>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
            ionotropic glutamatereceptor NMR-1 protein.
          Length = 1025

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +2

Query: 266  CPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYIG 445
            C  C   + + V R +     L   L  ++  WPC  +P   +S  +  H CP CS  +G
Sbjct: 954  CSRCRNIVESDVHRETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMG 1013

Query: 446  NY 451
             +
Sbjct: 1014 RF 1015


>AF068714-8|AAC17809.2|   86|Caenorhabditis elegans Hypothetical
           protein B0348.2 protein.
          Length = 86

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = +2

Query: 248 DPSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPN 427
           +P    C  C    VTR E        +   + CL+  WP +C   C +S ++  HYCP+
Sbjct: 17  EPHQVFCQKCQCNQVTRTETQLGACWWVVFIIGCLL-FWP-ICYWLCCDSSKDTMHYCPS 74

Query: 428 CSAYI 442
           C   +
Sbjct: 75  CGTLL 79


>AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical
           protein Y40H7A.11 protein.
          Length = 124

 Score = 34.7 bits (76), Expect = 0.055
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
 Frame = +2

Query: 236 QMGPDPSHY--TCPSCNTAIVTRVERVSTTKTHLFAAL-LCLIGCWPCVCIPYCTNSCQN 406
           +  P  S Y   C  C T + TRVE        L A L  C   C   +  P      ++
Sbjct: 51  KQAPTYSSYQENCTRCQTLVQTRVEHKIGIMWWLCATLSFCFFFCCYLLFFPIT----KD 106

Query: 407 AEHYCPNCSAYI 442
           A+H+CPNC + +
Sbjct: 107 AQHFCPNCGSLL 118


>AF068714-9|AAC17810.1|   87|Caenorhabditis elegans Hypothetical
           protein B0348.1 protein.
          Length = 87

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/73 (26%), Positives = 28/73 (38%)
 Frame = +2

Query: 248 DPSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPN 427
           +P    CP C     TR+E          A  +     +P +C   C  S ++  HYCP+
Sbjct: 17  EPYSEYCPKCQCNHTTRMES-RRGNCWWIAFFIGFFLFFP-ICYWLCCQSSKDTLHYCPS 74

Query: 428 CSAYIGNYSS*CS 466
           C   +      CS
Sbjct: 75  CGTLLATRQGGCS 87


>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
           protein E01G6.1 protein.
          Length = 1391

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -2

Query: 497 KHSSHFYYFVESINCCSFRCTRCSSGNNAQHFGSY-SCSKEC 375
           K S+ +Y+ + +  C SF+ T+C  G NA +FGS   C   C
Sbjct: 270 KSSNRYYFDIGTATCRSFKFTQC--GGNANNFGSLEECEGFC 309


>AL032626-23|CAE17974.1|   88|Caenorhabditis elegans Hypothetical
           protein Y37D8A.26 protein.
          Length = 88

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +2

Query: 266 CPSCNTAIVTRVERV-STTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYI 442
           C +C   + T+ E+V       LF   L L    PC  + +      +  H CPNC+  +
Sbjct: 27  CTNCQETVTTKTEQVFGMLNFALFITCLFL----PCFIVCFWCRCFMDVHHRCPNCNKSL 82

Query: 443 G 445
           G
Sbjct: 83  G 83


>AL032626-7|CAA21544.1|   79|Caenorhabditis elegans Hypothetical
           protein Y37D8A.8 protein.
          Length = 79

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +2

Query: 251 PSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNC 430
           P    CP C   +VT VE        L   L+  +  +    +  C    ++A H+CPNC
Sbjct: 12  PYQEYCPRCRCTVVTVVEYEMGCFAWLIIILIIFVAFFLIYIL--CCIDIRDAIHHCPNC 69


>AF039044-8|AAG24129.1|  717|Caenorhabditis elegans Nuclear hormone
           receptor familyprotein 83 protein.
          Length = 717

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/71 (25%), Positives = 28/71 (39%)
 Frame = -2

Query: 536 DPTKTQAYIYV*TKHSSHFYYFVESINCCSFRCTRCSSGNNAQHFGSYSCSKECKRMANN 357
           DP     Y  V T+ + H    +E     S  C  C   ++ +HFG  SC + C      
Sbjct: 337 DPKHVSEYREVITEKAEHLLDDMEPPLYLSGPCVICDQPSHGRHFGVLSC-RACAAFFRR 395

Query: 356 LLSKEEQQTDV 324
            L +  +  D+
Sbjct: 396 ALRRSAKSQDM 406


>U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical
           protein F35A5.4 protein.
          Length = 524

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +2

Query: 374 CIPYCTNSCQNAEHYCPNCSAYIGNYSS*CSQQN 475
           C+P C  +C +A      CS    N  S CSQ N
Sbjct: 199 CVPACMPACSSACVQAVTCSTCTNNCPSICSQAN 232


>AF078785-11|AAC27097.2|  294|Caenorhabditis elegans Hypothetical
           protein C04E12.12 protein.
          Length = 294

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +3

Query: 33  ITGNLVRDLCLTKLKWPMLNIKQICLAHTSYRRIRTRHRTSPNHNQEYILHILPYLLNRS 212
           I+G +V      K K   +NIK + LAHTS+       + +    + Y   I+ Y  N +
Sbjct: 23  ISGRVVLSTTKEKYKARAVNIKILGLAHTSWTDTERVRKVNAEGKEAYETKIVNYSANVN 82

Query: 213 WQSY 224
           +  Y
Sbjct: 83  YLDY 86


>AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical
           protein F35F10.12 protein.
          Length = 471

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +3

Query: 33  ITGNLVRDLCLTKLKWPMLNIKQICLAHTSYRRIRTRHRTSPNHNQEYILHILPYLLNRS 212
           I+G +V      K K   +NIK + LAHTS+       + +    + Y   I+ Y  N +
Sbjct: 23  ISGRVVLSTTKEKYKARAVNIKILGLAHTSWTDTERVRKVNAEGKETYETKIVNYSANVN 82

Query: 213 WQSY 224
           +  Y
Sbjct: 83  YLDY 86


>Z19156-1|CAA79563.1|  160|Caenorhabditis elegans Hypothetical
           protein T02C1.1 protein.
          Length = 160

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +2

Query: 347 CLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYIGN 448
           C+I C    C  +C  S  N    CP C A+ GN
Sbjct: 19  CIIECGHSYC-RFCIESHLNINEKCPLCRAHTGN 51


>U29377-3|AAA68720.2|  472|Caenorhabditis elegans Hypothetical
           protein K05F1.5 protein.
          Length = 472

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = +2

Query: 254 SHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIP-YCTNSCQNAEHYCPNC 430
           +H+ C  C+  +V    ++     H    +   IG     C+   C N+ +N    CP+ 
Sbjct: 121 AHFHCKICDQ-VVWNTNQMHLRTLHFLILIGIFIGGQTLGCMKKVCGNNAKNDFRRCPDT 179

Query: 431 SAYIGNY 451
               GNY
Sbjct: 180 DGSCGNY 186


>AL031629-6|CAA20980.2|  948|Caenorhabditis elegans Hypothetical
           protein Y106G6D.7 protein.
          Length = 948

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +2

Query: 98  ADLSGTHFVPPHQNPPPYVTQPQ 166
           ADLS T  +PP  NPPP    PQ
Sbjct: 203 ADLSNTRSLPPVNNPPPPHPIPQ 225


>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
            C37C3.6a protein.
          Length = 1558

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -2

Query: 482  FYYFVESINCCSFRCTRCSSGNNAQHFGSY-SCSKECKRMANNLLS 348
            +YY V + +C +F+ T C  G NA  F S   C   C + A+   S
Sbjct: 1391 WYYEVATGSCVTFKYTGC--GGNANRFASKDQCESLCVKPASEAAS 1434


>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
            C37C3.6b protein.
          Length = 2167

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -2

Query: 482  FYYFVESINCCSFRCTRCSSGNNAQHFGSY-SCSKECKRMANNLLS 348
            +YY V + +C +F+ T C  G NA  F S   C   C + A+   S
Sbjct: 1391 WYYEVATGSCVTFKYTGC--GGNANRFASKDQCESLCVKPASEAAS 1434


>AL110477-13|CAB54337.2|  789|Caenorhabditis elegans Hypothetical
           protein Y113G7B.23 protein.
          Length = 789

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 125 PPHQNPPPYVTQPQPG 172
           PP Q  PPY  QP PG
Sbjct: 707 PPQQQRPPYQAQPYPG 722


>AF230279-1|AAG16654.1|  789|Caenorhabditis elegans SWI3-like
           protein protein.
          Length = 789

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 125 PPHQNPPPYVTQPQPG 172
           PP Q  PPY  QP PG
Sbjct: 707 PPQQQRPPYQAQPYPG 722


>AJ871144-1|CAI38753.2|  476|Caenorhabditis elegans
           UDP-galactopyranose mutase protein.
          Length = 476

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 93  IKQICLAHTSYRRIRTRHRTSPNHNQEYIL-HILPYLLNRSWQSY 224
           +K  CLA    R    +  T+P++ +E++L H  P +LN  ++ Y
Sbjct: 123 VKNRCLADLKERYENPQDGTTPDNFEEWVLQHFGPTILNTFFKPY 167


>AF125442-8|AAD12787.2|  476|Caenorhabditis elegans Hypothetical
           protein H04M03.4 protein.
          Length = 476

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 93  IKQICLAHTSYRRIRTRHRTSPNHNQEYIL-HILPYLLNRSWQSY 224
           +K  CLA    R    +  T+P++ +E++L H  P +LN  ++ Y
Sbjct: 123 VKNRCLADLKERYENPQDGTTPDNFEEWVLQHFGPTILNTFFKPY 167


>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
           protein Y55F3BR.2 protein.
          Length = 1594

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -2

Query: 482 FYYFVESINCCSFRCTRCSSGNNAQHFGSYSCSKECKRM 366
           F+Y  E+  C SF  T C  GNN +      C   CK +
Sbjct: 605 FWYNAETKTCESFLYTGC-QGNNNRFNSLNECQSYCKNI 642


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,958,722
Number of Sequences: 27780
Number of extensions: 329900
Number of successful extensions: 1291
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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