BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV12b04f (627 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical pr... 71 7e-13 U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical pr... 51 6e-07 AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical... 47 1e-05 AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical ... 46 2e-05 AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical... 46 3e-05 AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 43 2e-04 AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical... 43 2e-04 U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 39 0.003 AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 39 0.003 AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical ... 38 0.004 AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 35 0.055 AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical ... 33 0.13 Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 33 0.17 AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical... 33 0.17 AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical ... 32 0.39 AF039044-8|AAG24129.1| 717|Caenorhabditis elegans Nuclear hormo... 30 1.2 U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 30 1.6 AF078785-11|AAC27097.2| 294|Caenorhabditis elegans Hypothetical... 30 1.6 AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical... 30 1.6 Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 29 2.1 U29377-3|AAA68720.2| 472|Caenorhabditis elegans Hypothetical pr... 29 2.7 AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 29 2.7 U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 28 4.8 U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 28 4.8 AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 4.8 AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 4.8 AJ871144-1|CAI38753.2| 476|Caenorhabditis elegans UDP-galactopy... 27 8.3 AF125442-8|AAD12787.2| 476|Caenorhabditis elegans Hypothetical ... 27 8.3 AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 27 8.3 >Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical protein F36G3.3 protein. Length = 141 Score = 70.9 bits (166), Expect = 7e-13 Identities = 30/70 (42%), Positives = 39/70 (55%) Frame = +2 Query: 236 QMGPDPSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEH 415 ++ P + CP C IVTR + V T +F A L L GCW C +P+C SC++ H Sbjct: 67 RLEPHATKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWCCCFLPFCLRSCKDIIH 126 Query: 416 YCPNCSAYIG 445 CPNC A IG Sbjct: 127 TCPNCRAMIG 136 >U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical protein F16F9.1 protein. Length = 157 Score = 51.2 bits (117), Expect = 6e-07 Identities = 23/61 (37%), Positives = 36/61 (59%) Frame = +2 Query: 263 TCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYI 442 TC SC + T + V + T + +L LI +P +P+C +SC++A HYCP C+A + Sbjct: 92 TCYSCGKYVHTLPKFVIGSLTWI-VFILVLICFFPLAFVPFCLDSCKDAHHYCPRCNALL 150 Query: 443 G 445 G Sbjct: 151 G 151 >AL110500-18|CAB54478.1| 118|Caenorhabditis elegans Hypothetical protein Y87G2A.18 protein. Length = 118 Score = 47.2 bits (107), Expect = 1e-05 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 6/74 (8%) Frame = +2 Query: 251 PSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGC------WPCVCIPYCTNSCQNAE 412 P CP C IV+ +ERV+ + A+L +G W C+P+ + + Sbjct: 43 PIEMDCPHCQNHIVSHIERVAGVLPWIIFAILAFLGIFLFIIPWCFCCVPFFLDQLLDVN 102 Query: 413 HYCPNCSAYIGNYS 454 H CP C ++G ++ Sbjct: 103 HSCPACKKFLGRFN 116 >AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical protein Y37D8A.6 protein. Length = 132 Score = 46.0 bits (104), Expect = 2e-05 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = +2 Query: 236 QMGPDPSHYT--CPSCNTAIVTRVERVS--TTKTHLFAALLCLIGCWPCVCIPYCTNSCQ 403 +M P YT CP CNT + TRVER + T LF L +P +C +C + + Sbjct: 59 KMAPSFEPYTEFCPRCNTNVCTRVERTMGFCSWTMLFLGLFVF---FPLLCC-FCLDGFK 114 Query: 404 NAEHYCPNCSAYI 442 ++ H CPNC + Sbjct: 115 DSRHSCPNCGTIL 127 >AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical protein Y87G2A.19 protein. Length = 110 Score = 45.6 bits (103), Expect = 3e-05 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%) Frame = +2 Query: 251 PSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIG--CWPC--VCIPYCTNSCQNAEHY 418 P CP C T + V+ T++ ++ + G P + +P+C + ++AEHY Sbjct: 33 PQLLDCPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWVPFCVETFKDAEHY 92 Query: 419 CPNCSAYIGNY 451 CP+C A+IG Y Sbjct: 93 CPSCRAWIGTY 103 >AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical protein Y41C4A.11 protein. Length = 386 Score = 43.2 bits (97), Expect = 2e-04 Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 6/114 (5%) Frame = +2 Query: 266 CPSCNTAIVTRVERVSTTKTHLFAALLCLIG----CWPCVCIPYCTNSCQNAEHYCPNCS 433 CP C T I+T V TT + L+C G CWP + I C + ++ +H CPNC Sbjct: 36 CPKCQTTIMTSV----TTHIGMCWWLICFFGTFLFCWP-ILICLCFDVSKDVDHNCPNCG 90 Query: 434 AYIGNYSS*CSQQNSKNANCV*FIHKYMPVSSWD-HKSKPYTMTSM-IGSTLKW 589 + S + + N F+ V S D H KP+ +T++ G+ W Sbjct: 91 LLLAT-----SNRAAPN-----FVSHSDRVKSVDFHSEKPWILTALHTGNVQIW 134 >AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical protein Y22D7AL.15 protein. Length = 152 Score = 42.7 bits (96), Expect = 2e-04 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +2 Query: 266 CPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYI 442 CP C T++ TR T + + + CWP + C S ++ +H+CPNC + Sbjct: 88 CPRCQTSVTTRTVHSIGTCWWIILFIGVFVFCWPILYCLCCAGS-KDVKHFCPNCGTML 145 >U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glutamate receptor protein1 protein. Length = 1025 Score = 38.7 bits (86), Expect = 0.003 Identities = 17/62 (27%), Positives = 27/62 (43%) Frame = +2 Query: 266 CPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYIG 445 C C + + V R + L L ++ WPC +P +S + H CP CS +G Sbjct: 954 CSRCRNIVESDVHRETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMG 1013 Query: 446 NY 451 + Sbjct: 1014 RF 1015 >AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ionotropic glutamatereceptor NMR-1 protein. Length = 1025 Score = 38.7 bits (86), Expect = 0.003 Identities = 17/62 (27%), Positives = 27/62 (43%) Frame = +2 Query: 266 CPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYIG 445 C C + + V R + L L ++ WPC +P +S + H CP CS +G Sbjct: 954 CSRCRNIVESDVHRETGLFAFLSCFLFAILFLWPCSPLPCFLSSFSDFVHICPLCSHIMG 1013 Query: 446 NY 451 + Sbjct: 1014 RF 1015 >AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical protein B0348.2 protein. Length = 86 Score = 38.3 bits (85), Expect = 0.004 Identities = 19/65 (29%), Positives = 29/65 (44%) Frame = +2 Query: 248 DPSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPN 427 +P C C VTR E + + CL+ WP +C C +S ++ HYCP+ Sbjct: 17 EPHQVFCQKCQCNQVTRTETQLGACWWVVFIIGCLL-FWP-ICYWLCCDSSKDTMHYCPS 74 Query: 428 CSAYI 442 C + Sbjct: 75 CGTLL 79 >AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical protein Y40H7A.11 protein. Length = 124 Score = 34.7 bits (76), Expect = 0.055 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Frame = +2 Query: 236 QMGPDPSHY--TCPSCNTAIVTRVERVSTTKTHLFAAL-LCLIGCWPCVCIPYCTNSCQN 406 + P S Y C C T + TRVE L A L C C + P ++ Sbjct: 51 KQAPTYSSYQENCTRCQTLVQTRVEHKIGIMWWLCATLSFCFFFCCYLLFFPIT----KD 106 Query: 407 AEHYCPNCSAYI 442 A+H+CPNC + + Sbjct: 107 AQHFCPNCGSLL 118 >AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical protein B0348.1 protein. Length = 87 Score = 33.5 bits (73), Expect = 0.13 Identities = 19/73 (26%), Positives = 28/73 (38%) Frame = +2 Query: 248 DPSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPN 427 +P CP C TR+E A + +P +C C S ++ HYCP+ Sbjct: 17 EPYSEYCPKCQCNHTTRMES-RRGNCWWIAFFIGFFLFFP-ICYWLCCQSSKDTLHYCPS 74 Query: 428 CSAYIGNYSS*CS 466 C + CS Sbjct: 75 CGTLLATRQGGCS 87 >Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical protein E01G6.1 protein. Length = 1391 Score = 33.1 bits (72), Expect = 0.17 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -2 Query: 497 KHSSHFYYFVESINCCSFRCTRCSSGNNAQHFGSY-SCSKEC 375 K S+ +Y+ + + C SF+ T+C G NA +FGS C C Sbjct: 270 KSSNRYYFDIGTATCRSFKFTQC--GGNANNFGSLEECEGFC 309 >AL032626-23|CAE17974.1| 88|Caenorhabditis elegans Hypothetical protein Y37D8A.26 protein. Length = 88 Score = 33.1 bits (72), Expect = 0.17 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = +2 Query: 266 CPSCNTAIVTRVERV-STTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYI 442 C +C + T+ E+V LF L L PC + + + H CPNC+ + Sbjct: 27 CTNCQETVTTKTEQVFGMLNFALFITCLFL----PCFIVCFWCRCFMDVHHRCPNCNKSL 82 Query: 443 G 445 G Sbjct: 83 G 83 >AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical protein Y37D8A.8 protein. Length = 79 Score = 31.9 bits (69), Expect = 0.39 Identities = 17/60 (28%), Positives = 25/60 (41%) Frame = +2 Query: 251 PSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNC 430 P CP C +VT VE L L+ + + + C ++A H+CPNC Sbjct: 12 PYQEYCPRCRCTVVTVVEYEMGCFAWLIIILIIFVAFFLIYIL--CCIDIRDAIHHCPNC 69 >AF039044-8|AAG24129.1| 717|Caenorhabditis elegans Nuclear hormone receptor familyprotein 83 protein. Length = 717 Score = 30.3 bits (65), Expect = 1.2 Identities = 18/71 (25%), Positives = 28/71 (39%) Frame = -2 Query: 536 DPTKTQAYIYV*TKHSSHFYYFVESINCCSFRCTRCSSGNNAQHFGSYSCSKECKRMANN 357 DP Y V T+ + H +E S C C ++ +HFG SC + C Sbjct: 337 DPKHVSEYREVITEKAEHLLDDMEPPLYLSGPCVICDQPSHGRHFGVLSC-RACAAFFRR 395 Query: 356 LLSKEEQQTDV 324 L + + D+ Sbjct: 396 ALRRSAKSQDM 406 >U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical protein F35A5.4 protein. Length = 524 Score = 29.9 bits (64), Expect = 1.6 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +2 Query: 374 CIPYCTNSCQNAEHYCPNCSAYIGNYSS*CSQQN 475 C+P C +C +A CS N S CSQ N Sbjct: 199 CVPACMPACSSACVQAVTCSTCTNNCPSICSQAN 232 >AF078785-11|AAC27097.2| 294|Caenorhabditis elegans Hypothetical protein C04E12.12 protein. Length = 294 Score = 29.9 bits (64), Expect = 1.6 Identities = 18/64 (28%), Positives = 29/64 (45%) Frame = +3 Query: 33 ITGNLVRDLCLTKLKWPMLNIKQICLAHTSYRRIRTRHRTSPNHNQEYILHILPYLLNRS 212 I+G +V K K +NIK + LAHTS+ + + + Y I+ Y N + Sbjct: 23 ISGRVVLSTTKEKYKARAVNIKILGLAHTSWTDTERVRKVNAEGKEAYETKIVNYSANVN 82 Query: 213 WQSY 224 + Y Sbjct: 83 YLDY 86 >AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical protein F35F10.12 protein. Length = 471 Score = 29.9 bits (64), Expect = 1.6 Identities = 18/64 (28%), Positives = 29/64 (45%) Frame = +3 Query: 33 ITGNLVRDLCLTKLKWPMLNIKQICLAHTSYRRIRTRHRTSPNHNQEYILHILPYLLNRS 212 I+G +V K K +NIK + LAHTS+ + + + Y I+ Y N + Sbjct: 23 ISGRVVLSTTKEKYKARAVNIKILGLAHTSWTDTERVRKVNAEGKETYETKIVNYSANVN 82 Query: 213 WQSY 224 + Y Sbjct: 83 YLDY 86 >Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical protein T02C1.1 protein. Length = 160 Score = 29.5 bits (63), Expect = 2.1 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +2 Query: 347 CLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYIGN 448 C+I C C +C S N CP C A+ GN Sbjct: 19 CIIECGHSYC-RFCIESHLNINEKCPLCRAHTGN 51 >U29377-3|AAA68720.2| 472|Caenorhabditis elegans Hypothetical protein K05F1.5 protein. Length = 472 Score = 29.1 bits (62), Expect = 2.7 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Frame = +2 Query: 254 SHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIP-YCTNSCQNAEHYCPNC 430 +H+ C C+ +V ++ H + IG C+ C N+ +N CP+ Sbjct: 121 AHFHCKICDQ-VVWNTNQMHLRTLHFLILIGIFIGGQTLGCMKKVCGNNAKNDFRRCPDT 179 Query: 431 SAYIGNY 451 GNY Sbjct: 180 DGSCGNY 186 >AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical protein Y106G6D.7 protein. Length = 948 Score = 29.1 bits (62), Expect = 2.7 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +2 Query: 98 ADLSGTHFVPPHQNPPPYVTQPQ 166 ADLS T +PP NPPP PQ Sbjct: 203 ADLSNTRSLPPVNNPPPPHPIPQ 225 >U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein C37C3.6a protein. Length = 1558 Score = 28.3 bits (60), Expect = 4.8 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -2 Query: 482 FYYFVESINCCSFRCTRCSSGNNAQHFGSY-SCSKECKRMANNLLS 348 +YY V + +C +F+ T C G NA F S C C + A+ S Sbjct: 1391 WYYEVATGSCVTFKYTGC--GGNANRFASKDQCESLCVKPASEAAS 1434 >U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein C37C3.6b protein. Length = 2167 Score = 28.3 bits (60), Expect = 4.8 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -2 Query: 482 FYYFVESINCCSFRCTRCSSGNNAQHFGSY-SCSKECKRMANNLLS 348 +YY V + +C +F+ T C G NA F S C C + A+ S Sbjct: 1391 WYYEVATGSCVTFKYTGC--GGNANRFASKDQCESLCVKPASEAAS 1434 >AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical protein Y113G7B.23 protein. Length = 789 Score = 28.3 bits (60), Expect = 4.8 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = +2 Query: 125 PPHQNPPPYVTQPQPG 172 PP Q PPY QP PG Sbjct: 707 PPQQQRPPYQAQPYPG 722 >AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like protein protein. Length = 789 Score = 28.3 bits (60), Expect = 4.8 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = +2 Query: 125 PPHQNPPPYVTQPQPG 172 PP Q PPY QP PG Sbjct: 707 PPQQQRPPYQAQPYPG 722 >AJ871144-1|CAI38753.2| 476|Caenorhabditis elegans UDP-galactopyranose mutase protein. Length = 476 Score = 27.5 bits (58), Expect = 8.3 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = +3 Query: 93 IKQICLAHTSYRRIRTRHRTSPNHNQEYIL-HILPYLLNRSWQSY 224 +K CLA R + T+P++ +E++L H P +LN ++ Y Sbjct: 123 VKNRCLADLKERYENPQDGTTPDNFEEWVLQHFGPTILNTFFKPY 167 >AF125442-8|AAD12787.2| 476|Caenorhabditis elegans Hypothetical protein H04M03.4 protein. Length = 476 Score = 27.5 bits (58), Expect = 8.3 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = +3 Query: 93 IKQICLAHTSYRRIRTRHRTSPNHNQEYIL-HILPYLLNRSWQSY 224 +K CLA R + T+P++ +E++L H P +LN ++ Y Sbjct: 123 VKNRCLADLKERYENPQDGTTPDNFEEWVLQHFGPTILNTFFKPY 167 >AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical protein Y55F3BR.2 protein. Length = 1594 Score = 27.5 bits (58), Expect = 8.3 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -2 Query: 482 FYYFVESINCCSFRCTRCSSGNNAQHFGSYSCSKECKRM 366 F+Y E+ C SF T C GNN + C CK + Sbjct: 605 FWYNAETKTCESFLYTGC-QGNNNRFNSLNECQSYCKNI 642 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,958,722 Number of Sequences: 27780 Number of extensions: 329900 Number of successful extensions: 1291 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 1164 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1279 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1374536540 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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